Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI08702 Sapria himalayana HOM05D007898 ORTHO05D010010 5.2e-66 254.2 127 100.0
Potri.007G032900 Populus trichocarpa HOM05D007898 ORTHO05D010010 5.6e-28 127.9 120 56.7
Sabra07G0028800 Salix brachista HOM05D007898 ORTHO05D010010 9.6e-28 127.1 120 56.7
FAN28G1054 Fragaria x ananassa HOM05D007898 ORTHO05D010010 8.2e-27 124.0 111 58.6
MD15G1271500 Malus domestica HOM05D007898 ORTHO05D010010 1.1e-26 123.6 106 60.4
TAR381G0528 Trochodendron aralioides HOM05D007898 ORTHO05D010010 1.8e-26 122.9 111 52.3
FvH4_1g14340 Fragaria vesca HOM05D007898 ORTHO05D010010 2.4e-26 122.5 111 57.7
FAN23G0801 Fragaria x ananassa HOM05D007898 ORTHO05D010010 3.1e-26 122.1 111 57.7
Dinv26786 Davidia involucrata HOM05D007898 ORTHO05D010010 6.9e-26 120.9 112 54.5
Manes.12G096600 Manihot esculenta HOM05D007898 ORTHO05D010010 1.2e-25 120.2 116 54.3
Thecc.01G044100 Theobroma cacao HOM05D007898 ORTHO05D010010 1.2e-25 120.2 109 57.8
RcHm_v2.0_Chr2g0103011 Rosa chinensis HOM05D007898 ORTHO05D010010 3.4e-25 118.6 112 56.2
Hma1.2p1_0261F.1_g104820 Hydrangea macrophylla HOM05D007898 ORTHO05D010010 4.5e-25 118.2 116 51.7
THA.LOC104819816 Tarenaya hassleriana HOM05D007898 ORTHO05D010010 4.5e-25 118.2 111 55.9
Cfa004248 Carpinus fangiana HOM05D007898 ORTHO05D010010 5.8e-25 117.9 116 52.6
TPR.G31555 Trifolium pratense HOM05D007898 ORTHO05D010010 5.8e-25 117.9 109 56.0
arahy.Tifrunner.gnm1.ann1.376QVY Arachis hypogaea HOM05D007898 ORTHO05D010010 7.6e-25 117.5 112 54.5
TWI73G0930 Tripterygium wilfordii HOM05D007898 ORTHO05D010010 7.6e-25 117.5 115 55.7
QL06p044475 Quercus lobata HOM05D007898 ORTHO05D010010 1.0e-24 117.1 114 53.5
arahy.Tifrunner.gnm1.ann1.P18VIJ Arachis hypogaea HOM05D007898 ORTHO05D010010 4.9e-24 114.8 112 53.6
Thhalv10000478m.g Eutrema salsugineum HOM05D007898 ORTHO05D010010 6.5e-24 114.4 110 59.1
Prupe.7G146700 Prunus persica HOM05D007898 ORTHO05D010010 6.5e-24 114.4 122 50.0
CiPaw.02G014000 Carya illinoinensis HOM05D007898 ORTHO05D010010 1.4e-23 113.2 114 50.9
Gohir.D04G023600 Gossypium hirsutum HOM05D007898 ORTHO05D010010 4.2e-23 111.7 107 57.0
CSS0004703 Camellia sinensis var. sinensis HOM05D007898 ORTHO05D010010 7.1e-23 110.9 112 50.9
Gorai.012G033200 Gossypium raimondii HOM05D007898 ORTHO05D010010 7.1e-23 110.9 107 56.1
CARHR114600 Cardamine hirsuta HOM05D007898 ORTHO05D010010 9.3e-23 110.5 111 55.0
Gohir.D04G023900 Gossypium hirsutum HOM05D007898 ORTHO05D010010 1.2e-22 110.2 107 56.1
Peaxi162Scf00535g00419 Petunia axillaris HOM05D007898 ORTHO05D010010 1.2e-22 110.2 113 50.4
GSVIVG01019045001 Vitis vinifera HOM05D007898 ORTHO05D010010 1.2e-22 110.2 113 53.1
AL4G13750 Arabidopsis lyrata HOM05D007898 ORTHO05D010010 1.6e-22 109.8 112 54.5
Gohir.D04G029100 Gossypium hirsutum HOM05D007898 ORTHO05D010010 1.6e-22 109.8 107 55.1
CANSAT01G0863 Cannabis sativa HOM05D007898 ORTHO05D010010 2.7e-22 109.0 109 56.0
CSS0023760 Camellia sinensis var. sinensis HOM05D007898 ORTHO05D010010 3.5e-22 108.6 112 50.0
Eucgr.K01101 Eucalyptus grandis HOM05D007898 ORTHO05D010010 3.5e-22 108.6 112 53.6
Gohir.A05G386500 Gossypium hirsutum HOM05D007898 ORTHO05D010010 3.5e-22 108.6 107 55.1
Gohir.A02G162400 Gossypium hirsutum HOM05D007898 ORTHO05D010010 6.0e-22 107.8 107 54.2
Gohir.D03G018100 Gossypium hirsutum HOM05D007898 ORTHO05D010010 7.9e-22 107.5 107 53.3
Sopen02g034650 Solanum pennellii HOM05D007898 ORTHO05D010010 1.0e-21 107.1 110 50.9
Oeu043831.1 Olea europaea HOM05D007898 ORTHO05D010010 1.8e-21 106.3 122 45.1
PGR142G0285 Punica granatum HOM05D007898 ORTHO05D010010 2.3e-21 105.9 111 50.5
Nitab4.5_0004932g0020 Nicotiana tabacum HOM05D007898 ORTHO05D010010 3.0e-21 105.5 110 50.9
CDE02G3439 Ceratophyllum demersum HOM05D007898 ORTHO05D010010 3.9e-21 105.1 109 49.5
Lj7P13T39 Lonicera japonica HOM05D007898 ORTHO05D010010 3.9e-21 105.1 114 49.1
PGSC0003DMG400010085 Solanum tuberosum HOM05D007898 ORTHO05D010010 1.1e-20 103.6 110 52.7
AT2G23755 Arabidopsis thaliana HOM05D007898 ORTHO05D010010 3.3e-20 102.1 112 53.6
Carub.0004s0293 Capsella rubella HOM05D007898 ORTHO05D010010 3.3e-20 102.1 109 54.1
CAN.G836.11 Capsicum annuum HOM05D007898 ORTHO05D010010 4.3e-20 101.7 110 50.9
Cc07_g05300 Coffea canephora HOM05D007898 ORTHO05D010010 4.3e-20 101.7 109 50.5
Nitab4.5_0000483g0020 Nicotiana tabacum HOM05D007898 ORTHO05D010010 5.7e-20 101.3 107 51.4
PSO170G4740 Papaver somniferum HOM05D007898 ORTHO05D010010 1.3e-19 100.1 109 49.5
AUR62008035 Chenopodium quinoa HOM05D007898 ORTHO05D010010 1.6e-19 99.8 110 47.3
Migut.K00847 Erythranthe guttata HOM05D007898 ORTHO05D010010 6.3e-19 97.8 110 49.1
AUR62003213 Chenopodium quinoa HOM05D007898 ORTHO05D010010 1.1e-18 97.1 107 46.7
ATR0053G039 Amborella trichopoda HOM05D007898 ORTHO05D010010 1.4e-18 96.7 113 48.7
MELO3C007502.2 Cucumis melo HOM05D007898 ORTHO05D010010 3.1e-18 95.5 122 44.3
CsaV3_6G042630 Cucumis sativus L. HOM05D007898 ORTHO05D010010 6.9e-18 94.4 107 48.6
EL10Ac6g14865 Beta vulgaris HOM05D007898 ORTHO05D010010 1.2e-17 93.6 106 49.1
Solyc02g089960.3 Solanum lycopersicum HOM05D007898 ORTHO05D010010 1.2e-17 93.6 110 49.1
ClCG01G016310 Citrullus lanatus HOM05D007898 ORTHO05D010010 2.0e-17 92.8 109 46.8
Nn1g05126 Nelumbo nucifera HOM05D007898 ORTHO05D010010 2.6e-17 92.4 109 48.6
TAR374G1689 Trochodendron aralioides HOM05D007898 ORTHO05D010010 2.6e-17 92.4 84 52.4
SalBow1G4022 Salvia bowleyana HOM05D007898 ORTHO05D010010 4.5e-17 91.7 111 46.8
Sed0027812 Sechium edule HOM05D007898 ORTHO05D010010 5.9e-17 91.3 107 50.5
Ah.03g142230 Amaranthus hybridus HOM05D007898 ORTHO05D010010 1.3e-16 90.1 103 48.5
FAN26G2880 Fragaria x ananassa HOM05D007898 ORTHO05D010010 1.9e-15 86.3 91 49.5
SEGI_13764 Sequoiadendron giganteum HOM05D007898 ORTHO05D010010 1.6e-14 83.2 109 44.0
BraA09t41069Z Brassica rapa HOM05D007898 ORTHO05D010010 6.1e-14 81.3 114 42.1
Hund14127 Selenicereus undatus HOM05D007898 ORTHO05D010010 1.4e-13 80.1 108 43.5
Ciclev10027359m.g Citrus clementina HOM05D007898 ORTHO05D010010 4.3e-12 75.1 89 47.2
A09p56800 Brassica napus HOM05D007898 ORTHO05D010010 7.4e-12 74.3 94 44.7
Gorai.003G018300 Gossypium raimondii HOM05D007898 ORTHO05D010010 1.7e-11 73.2 113 44.2
SGA_v2.0_scaffold62G21534 Striga asiatica HOM05D007898 ORTHO05D010010 3.7e-11 72.0 91 44.0
C08p39760 Brassica napus HOM05D007898 ORTHO05D010010 4.8e-11 71.6 94 43.6
BolC8t51548H Brassica oleracea HOM05D007898 ORTHO05D010010 4.8e-11 71.6 94 43.6
Haze_15152 Corylus avellana HOM05D007898 ORTHO05D010010 1.0e-08 63.9 114 40.4
CDE02G3192 Ceratophyllum demersum HOM05D007898 ORTHO05D010010 6.5e-08 61.2 86 39.5
Lj4g0012479 Lotus japonicus HOM05D007898 ORTHO05D010010 3.2e-07 58.9 72 44.4


User provided reference genes

Program Settings