Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI08688 Sapria himalayana HOM05D000292 ORTHO05D000172 1.5e-36 155.6 76 100.0
SHI06696 Sapria himalayana HOM05D000292 ORTHO05D000172 8.1e-14 80.1 66 69.7
SHI13490 Sapria himalayana HOM05D000292 ORTHO05D000172 1.4e-13 79.3 65 69.2
SHI17838 Sapria himalayana HOM05D000292 ORTHO05D000172 2.4e-13 78.6 66 66.7
SHI13488 Sapria himalayana HOM05D000292 ORTHO05D000172 1.5e-12 75.9 65 66.2
SHI29377 Sapria himalayana HOM05D000292 ORTHO05D000172 2.9e-11 71.6 65 63.1
SalBow3G4452 Salvia bowleyana HOM05D000292 ORTHO05D000172 3.2e-10 68.2 65 55.4
Prupe.2G228800 Prunus persica HOM05D000292 ORTHO05D000172 5.4e-10 67.4 69 56.5
SHI10890 Sapria himalayana HOM05D000292 ORTHO05D000172 7.1e-10 67.0 68 58.8
FAN06G4227 Fragaria x ananassa HOM05D000292 ORTHO05D000172 9.2e-10 66.6 65 56.9
GSVIVG01016636001 Vitis vinifera HOM05D000292 ORTHO05D000172 9.2e-10 66.6 65 56.9
FAN03G0351 Fragaria x ananassa HOM05D000292 ORTHO05D000172 1.2e-09 66.2 65 56.9
MD07G1190600 Malus domestica HOM05D000292 ORTHO05D000172 1.2e-09 66.2 67 59.7
FvH4_7g22740 Fragaria vesca HOM05D000292 ORTHO05D000172 1.6e-09 65.9 65 56.9
FAN01G1249 Fragaria x ananassa HOM05D000292 ORTHO05D000172 1.6e-09 65.9 65 56.9
SalBow3G0746 Salvia bowleyana HOM05D000292 ORTHO05D000172 1.6e-09 65.9 65 52.3
FAN01G2320 Fragaria x ananassa HOM05D000292 ORTHO05D000172 3.5e-09 64.7 65 55.4
FvH4_7g21270 Fragaria vesca HOM05D000292 ORTHO05D000172 4.6e-09 64.3 64 57.8
CsaV3_5G006800 Cucumis sativus L. HOM05D000292 ORTHO05D000172 7.8e-09 63.5 70 48.6
SalBow3G3088 Salvia bowleyana HOM05D000292 ORTHO05D000172 7.8e-09 63.5 54 59.3
Solyc06g069800.2 Solanum lycopersicum HOM05D000292 ORTHO05D000172 7.8e-09 63.5 72 47.2
MELO3C023833.2 Cucumis melo HOM05D000292 ORTHO05D000172 1.0e-08 63.2 70 50.0
FvH4_7g22750 Fragaria vesca HOM05D000292 ORTHO05D000172 1.0e-08 63.2 65 53.8
Nitab4.5_0001048g0050 Nicotiana tabacum HOM05D000292 ORTHO05D000172 1.0e-08 63.2 65 47.7
FvH4_7g21340 Fragaria vesca HOM05D000292 ORTHO05D000172 1.3e-08 62.8 64 57.8
FAN10G0445 Fragaria x ananassa HOM05D000292 ORTHO05D000172 1.7e-08 62.4 64 57.8
SalBow3G2314 Salvia bowleyana HOM05D000292 ORTHO05D000172 1.7e-08 62.4 65 50.8
SGA_v2.0_scaffold634G53299 Striga asiatica HOM05D000292 ORTHO05D000172 1.7e-08 62.4 64 54.7
RcHm_v2.0_Chr1g0365711 Rosa chinensis HOM05D000292 ORTHO05D000172 2.3e-08 62.0 67 55.2
RcHm_v2.0_Chr1g0365731 Rosa chinensis HOM05D000292 ORTHO05D000172 2.3e-08 62.0 67 55.2
CAN.G628.9 Capsicum annuum HOM05D000292 ORTHO05D000172 3.0e-08 61.6 62 51.6
Cc00_g34330 Coffea canephora HOM05D000292 ORTHO05D000172 3.9e-08 61.2 67 49.3
Haze_17004 Corylus avellana HOM05D000292 ORTHO05D000172 3.9e-08 61.2 67 44.8
FAN03G0479 Fragaria x ananassa HOM05D001370 ORTHO05D002518 3.9e-08 61.2 64 51.6
FAN06G2100 Fragaria x ananassa HOM05D000292 ORTHO05D000172 3.9e-08 61.2 64 53.1
QL08p058237 Quercus lobata HOM05D000292 ORTHO05D000172 3.9e-08 61.2 64 51.6
Sopen06g027090 Solanum pennellii HOM05D000002 ORTHO05D000001 3.9e-08 61.2 72 45.8
SGA_v2.0_scaffold385G50477 Striga asiatica HOM05D000292 ORTHO05D000172 3.9e-08 61.2 67 47.8
CANSAT64G2087 Cannabis sativa HOM05D000292 ORTHO05D000172 5.1e-08 60.8 70 51.4
MD07G1190400 Malus domestica HOM05D000292 ORTHO05D000172 5.1e-08 60.8 64 53.1
Sed0025277 Sechium edule HOM05D000292 ORTHO05D000172 5.1e-08 60.8 63 52.4
COL.COLO4_10931 Corchorus olitorius HOM05D000292 ORTHO05D000172 8.7e-08 60.1 60 48.3
Peaxi162Scf00013g00229 Petunia axillaris HOM05D000292 ORTHO05D000172 1.1e-07 59.7 67 47.8
Prupe.7G048700 Prunus persica HOM05D000292 ORTHO05D000172 1.1e-07 59.7 68 48.5
SHI02828 Sapria himalayana HOM05D005808 ORTHO05D006196 1.1e-07 59.7 46 67.4
CANSAT78G0101 Cannabis sativa HOM05D000292 ORTHO05D000172 1.9e-07 58.9 70 48.6
COL.COLO4_14887 Corchorus olitorius HOM05D000292 ORTHO05D000172 1.9e-07 58.9 64 56.2
Lsat_1_v5_gn_2_115780 Lactuca sativa HOM05D000292 ORTHO05D000172 1.9e-07 58.9 44 65.9
SalBow3G1856 Salvia bowleyana HOM05D000292 ORTHO05D000172 1.9e-07 58.9 65 47.7
Ciclev10033365m.g Citrus clementina HOM05D000292 ORTHO05D000172 2.5e-07 58.5 59 54.2
Cc00_g25420 Coffea canephora HOM05D000292 ORTHO05D000172 2.5e-07 58.5 67 49.3
Migut.N02559 Erythranthe guttata HOM05D000292 ORTHO05D000172 2.5e-07 58.5 63 52.4
FvH4_7g21330 Fragaria vesca HOM05D000292 ORTHO05D000172 2.5e-07 58.5 67 52.2
Sed0026934 Sechium edule HOM05D000292 ORTHO05D000172 2.5e-07 58.5 70 48.6
FvH4_7g21300 Fragaria vesca HOM05D000292 ORTHO05D000172 3.3e-07 58.2 68 47.1
Prupe.2G228400 Prunus persica HOM05D000292 ORTHO05D000172 3.3e-07 58.2 77 46.8
Sed0005312 Sechium edule HOM05D000292 ORTHO05D000172 3.3e-07 58.2 67 49.3
TWI38G2330 Tripterygium wilfordii HOM05D000292 ORTHO05D000172 3.3e-07 58.2 59 55.9
Nitab4.5_0001048g0040 Nicotiana tabacum HOM05D000292 ORTHO05D000172 4.3e-07 57.8 67 46.3
Peaxi162Scf00013g00231 Petunia axillaris HOM05D000292 ORTHO05D000172 4.3e-07 57.8 66 45.5
CAN.G628.7 Capsicum annuum HOM05D000292 ORTHO05D000172 5.6e-07 57.4 66 45.5
Haze_17009 Corylus avellana HOM05D000292 ORTHO05D000172 5.6e-07 57.4 77 44.2
Prupe.2G228600 Prunus persica HOM05D000292 ORTHO05D000172 5.6e-07 57.4 67 47.8
Nitab4.5_0002352g0120 Nicotiana tabacum HOM05D000292 ORTHO05D000172 7.3e-07 57.0 68 44.1
RcHm_v2.0_Chr1g0365991 Rosa chinensis HOM05D000292 ORTHO05D000172 7.3e-07 57.0 54 51.9
CANSAT78G2067 Cannabis sativa HOM05D000292 ORTHO05D000172 9.6e-07 56.6 70 48.6
CAN.G587.3 Capsicum annuum HOM05D000292 ORTHO05D000172 9.6e-07 56.6 66 45.5
FAN10G0906 Fragaria x ananassa HOM05D000292 ORTHO05D000172 9.6e-07 56.6 67 49.3
Gohir.D10G220600 Gossypium hirsutum HOM05D000292 ORTHO05D000172 9.6e-07 56.6 46 63.0
Nitab4.5_0009487g0030 Nicotiana tabacum HOM05D000292 ORTHO05D000172 9.6e-07 56.6 69 44.9
QL08p058034 Quercus lobata HOM05D000292 ORTHO05D000172 9.6e-07 56.6 65 47.7
QL08p058126 Quercus lobata HOM05D000292 ORTHO05D000172 9.6e-07 56.6 46 65.2
QL08p058642 Quercus lobata HOM05D000292 ORTHO05D000172 9.6e-07 56.6 68 44.1
CAN.G628.17 Capsicum annuum HOM05D000292 ORTHO05D000172 1.2e-06 56.2 77 41.6
Migut.N02557 Erythranthe guttata HOM05D000292 ORTHO05D000172 1.2e-06 56.2 72 45.8
FAN10G4061 Fragaria x ananassa HOM05D000292 ORTHO05D000172 1.2e-06 56.2 62 54.8
Glyma.20G239900 Glycine max HOM05D000292 ORTHO05D000172 1.2e-06 56.2 64 50.0
SalBow3G3392 Salvia bowleyana HOM05D000292 ORTHO05D000172 1.2e-06 56.2 67 47.8
TWI15G1166 Tripterygium wilfordii HOM05D000292 ORTHO05D000172 1.2e-06 56.2 46 63.0
Cc02_g08420 Coffea canephora HOM05D000292 ORTHO05D000172 1.6e-06 55.8 67 44.8
COL.COLO4_10928 Corchorus olitorius HOM05D000292 ORTHO05D000172 1.6e-06 55.8 63 46.0
Phvul.007G010200 Phaseolus vulgaris HOM05D000292 ORTHO05D000172 1.6e-06 55.8 64 45.3
Rhsim09G0161800 Rhododendron simsii HOM05D000292 ORTHO05D000172 1.6e-06 55.8 64 48.4
Rhsim09G0162900 Rhododendron simsii HOM05D000292 ORTHO05D000172 1.6e-06 55.8 63 50.8
TWI38G0035 Tripterygium wilfordii HOM05D000292 ORTHO05D000172 1.6e-06 55.8 60 50.0
COL.COLO4_14888 Corchorus olitorius HOM05D000292 ORTHO05D000172 2.1e-06 55.5 64 48.4
FvH4_3g24890 Fragaria vesca HOM05D000292 ORTHO05D000172 2.1e-06 55.5 68 44.1
Rhsim09G0159500 Rhododendron simsii HOM05D000292 ORTHO05D000172 2.1e-06 55.5 64 51.6
Rhsim09G0162800 Rhododendron simsii HOM05D000292 ORTHO05D000172 2.1e-06 55.5 67 46.3
MSTRG.12341 Avicennia marina HOM05D000292 ORTHO05D000172 2.8e-06 55.1 65 49.2
CiPaw.02G180500 Carya illinoinensis HOM05D000292 ORTHO05D000172 2.8e-06 55.1 66 47.0
COL.COLO4_10929 Corchorus olitorius HOM05D000292 ORTHO05D000172 2.8e-06 55.1 64 46.9
Migut.N02554 Erythranthe guttata HOM05D000292 ORTHO05D000172 2.8e-06 55.1 66 47.0
Hund16006 Selenicereus undatus HOM05D000292 ORTHO05D000172 2.8e-06 55.1 66 45.5
PGSC0003DMG400033081 Solanum tuberosum HOM05D000292 ORTHO05D000172 2.8e-06 55.1 65 46.2
RcHm_v2.0_Chr5g0044511 Rosa chinensis HOM05D000292 ORTHO05D000172 3.6e-06 54.7 64 48.4
Solyc06g069820.4 Solanum lycopersicum HOM05D000292 ORTHO05D000172 3.6e-06 54.7 67 44.8
Sopen06g027110 Solanum pennellii HOM05D000292 ORTHO05D000172 3.6e-06 54.7 67 44.8
Thecc.10G057300 Theobroma cacao HOM05D000292 ORTHO05D000172 3.6e-06 54.7 63 46.0
Duzib114G0432 Durio zibethinus HOM05D000292 ORTHO05D000172 4.7e-06 54.3 62 46.8
Duzib114G0741 Durio zibethinus HOM05D000292 ORTHO05D000172 4.7e-06 54.3 66 54.5
ECA238G1794 Erigeron canadensis HOM05D000292 ORTHO05D000172 4.7e-06 54.3 48 62.5
Nn7g38385 Nelumbo nucifera HOM05D000292 ORTHO05D000172 4.7e-06 54.3 62 50.0
MD01G1121000 Malus domestica HOM05D000292 ORTHO05D000172 6.2e-06 53.9 66 47.0
Medtr1g115440 Medicago truncatula HOM05D000292 ORTHO05D000172 6.2e-06 53.9 46 56.5
QL08p058624 Quercus lobata HOM05D000292 ORTHO05D000172 6.2e-06 53.9 68 41.2
Rhsim09G0158900 Rhododendron simsii HOM05D000292 ORTHO05D000172 6.2e-06 53.9 64 51.6
Rhsim09G0161600 Rhododendron simsii HOM05D000292 ORTHO05D000172 6.2e-06 53.9 65 47.7
CANSAT56G3835 Cannabis sativa HOM05D000292 ORTHO05D000172 8.1e-06 53.5 70 47.1
Ciclev10032585m.g Citrus clementina HOM05D000292 ORTHO05D000172 8.1e-06 53.5 69 44.9
Migut.N02560 Erythranthe guttata HOM05D000292 ORTHO05D000172 8.1e-06 53.5 67 47.8
Eucgr.J00056 Eucalyptus grandis HOM05D000292 ORTHO05D000172 8.1e-06 53.5 58 50.0
HanXRQChr14g0457651 Helianthus annuus HOM05D000292 ORTHO05D000172 8.1e-06 53.5 44 61.4
Rhsim09G0159600 Rhododendron simsii HOM05D000292 ORTHO05D000172 8.1e-06 53.5 66 50.0
Rhsim09G0162500 Rhododendron simsii HOM05D000292 ORTHO05D000172 8.1e-06 53.5 75 46.7


User provided reference genes

Program Settings