Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI08627 Sapria himalayana HOM05D000023 ORTHO05D000014 1.1e-34 149.4 78 100.0
SHI26236 Sapria himalayana HOM05D000023 ORTHO05D000014 2.6e-15 85.1 160 39.4
SHI32734 Sapria himalayana HOM05D000023 ORTHO05D000014 4.4e-15 84.3 51 86.3
SHI08605 Sapria himalayana HOM05D000105 ORTHO05D000014 1.3e-14 82.8 51 84.3
SHI28166 Sapria himalayana HOM05D000023 ORTHO05D000014 2.2e-14 82.0 50 88.0
SHI09321 Sapria himalayana HOM05D000023 ORTHO05D000014 2.9e-14 81.6 55 78.2
SHI13402 Sapria himalayana HOM05D004297 ORTHO05D005213 2.9e-14 81.6 51 84.3
SHI14569 Sapria himalayana HOM05D000023 ORTHO05D000014 2.9e-14 81.6 51 84.3
SHI14718 Sapria himalayana HOM05D000023 ORTHO05D000014 2.9e-14 81.6 51 84.3
SHI17120 Sapria himalayana HOM05D000023 ORTHO05D000014 2.9e-14 81.6 51 84.3
SHI21487 Sapria himalayana HOM05D000023 ORTHO05D000014 2.9e-14 81.6 51 84.3
SHI07290 Sapria himalayana HOM05D000023 ORTHO05D000014 3.7e-14 81.3 51 82.4
SHI10685 Sapria himalayana HOM05D000023 ORTHO05D000014 4.9e-14 80.9 51 84.3
SHI05427 Sapria himalayana HOM05D004755 ORTHO05D006137 6.3e-14 80.5 51 82.4
SHI12783 Sapria himalayana HOM05D000023 ORTHO05D000014 6.3e-14 80.5 51 82.4
SHI49901 Sapria himalayana HOM05D000023 ORTHO05D000014 1.4e-13 79.3 51 82.4
SHI27557 Sapria himalayana HOM05D000023 ORTHO05D000014 7.0e-13 77.0 51 82.4
SHI06024 Sapria himalayana HOM05D000023 ORTHO05D000014 1.0e-11 73.2 47 83.0
SHI04695 Sapria himalayana HOM05D000023 ORTHO05D000014 1.3e-11 72.8 71 62.0
SHI29372 Sapria himalayana HOM05D000023 ORTHO05D000014 2.9e-11 71.6 51 76.5
SHI17476 Sapria himalayana HOM05D000023 ORTHO05D000014 6.6e-11 70.5 41 85.4
RcHm_v2.0_Chr2g0102701 Rosa chinensis HOM05D000023 ORTHO05D000014 1.1e-10 69.7 51 70.6
RcHm_v2.0_Chr6g0295001 Rosa chinensis HOM05D000023 ORTHO05D000014 1.1e-10 69.7 51 70.6
MD17G1176800 Malus domestica HOM05D000023 ORTHO05D000014 1.5e-10 69.3 49 69.4
Atru.chr6.596 Acer truncatum HOM05D000023 ORTHO05D000014 1.9e-10 68.9 51 72.5
RcHm_v2.0_Chr6g0278171 Rosa chinensis HOM05D000023 ORTHO05D000014 2.5e-10 68.6 51 68.6
SHI09712 Sapria himalayana HOM05D000023 ORTHO05D000014 3.3e-10 68.2 40 87.5
SHI10518 Sapria himalayana HOM05D000023 ORTHO05D000014 5.6e-10 67.4 48 72.9
Atru.chr7.421 Acer truncatum HOM05D000023 ORTHO05D000014 7.3e-10 67.0 51 70.6
Atru.chr13.2560 Acer truncatum HOM05D000023 ORTHO05D000014 1.2e-09 66.2 50 68.0
Os02g0513700 Oryza sativa ssp. japonica HOM05D000023 ORTHO05D000014 2.1e-09 65.5 51 64.7
SHI28312 Sapria himalayana HOM05D000023 ORTHO05D000014 2.1e-09 65.5 51 70.6
Oeu061850.1 Olea europaea HOM05D000023 ORTHO05D000014 2.8e-09 65.1 51 70.6
RcHm_v2.0_Chr7g0205361 Rosa chinensis HOM05D000023 ORTHO05D000014 8.0e-09 63.5 54 59.3
TWI18G0892 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 8.0e-09 63.5 56 62.5
TWI63G0054 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 8.0e-09 63.5 56 62.5
Atru.chr9.1059 Acer truncatum HOM05D000023 ORTHO05D000014 1.0e-08 63.2 51 66.7
Oeu032447.1 Olea europaea HOM05D000023 ORTHO05D000014 1.0e-08 63.2 51 68.6
FvH4_5g06632 Fragaria vesca HOM05D000023 ORTHO05D000014 1.8e-08 62.4 51 60.8
Os06g0658400 Oryza sativa ssp. japonica HOM05D000023 ORTHO05D000014 1.8e-08 62.4 51 62.7
arahy.Tifrunner.gnm1.ann1.F23DGP Arachis hypogaea HOM05D000023 ORTHO05D000014 2.3e-08 62.0 77 46.8
arahy.Tifrunner.gnm1.ann1.KV4G29 Arachis hypogaea HOM05D000023 ORTHO05D000014 2.3e-08 62.0 77 46.8
arahy.Tifrunner.gnm1.ann1.UW16ZC Arachis hypogaea HOM05D000023 ORTHO05D000014 2.3e-08 62.0 77 46.8
arahy.Tifrunner.gnm1.ann1.PERH2Y Arachis hypogaea HOM05D000023 ORTHO05D000014 3.1e-08 61.6 51 62.7
Dinv11853 Davidia involucrata HOM05D000023 ORTHO05D000014 3.1e-08 61.6 51 60.8
FvH4_5g08812 Fragaria vesca HOM05D000023 ORTHO05D000014 3.1e-08 61.6 43 72.1
arahy.Tifrunner.gnm1.ann1.59J3RY Arachis hypogaea HOM05D000023 ORTHO05D000014 4.0e-08 61.2 51 62.7
QL04p036651 Quercus lobata HOM05D000023 ORTHO05D000014 4.0e-08 61.2 51 62.7
TWI74G0862 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 5.2e-08 60.8 56 58.9
ClCG04G001860 Citrullus lanatus HOM05D000004 ORTHO05D000002 6.8e-08 60.5 51 62.7
COL.COLO4_21793 Corchorus olitorius HOM05D000023 ORTHO05D000014 6.8e-08 60.5 51 58.8
Gorai.011G116500 Gossypium raimondii HOM05D000023 ORTHO05D000014 6.8e-08 60.5 51 62.7
Sp7g11960 Schrenkiella parvula HOM05D000023 ORTHO05D000014 6.8e-08 60.5 50 68.0
arahy.Tifrunner.gnm1.ann1.956LMD Arachis hypogaea HOM05D000023 ORTHO05D000014 8.9e-08 60.1 51 62.7
arahy.Tifrunner.gnm1.ann1.B0DQ39 Arachis hypogaea HOM05D000023 ORTHO05D000014 8.9e-08 60.1 51 62.7
arahy.Tifrunner.gnm1.ann1.CHR5JU Arachis hypogaea HOM05D000023 ORTHO05D000014 8.9e-08 60.1 51 62.7
arahy.Tifrunner.gnm1.ann1.GA19A6 Arachis hypogaea HOM05D000023 ORTHO05D000014 8.9e-08 60.1 51 62.7
arahy.Tifrunner.gnm1.ann1.LZ7HA6 Arachis hypogaea HOM05D000023 ORTHO05D000014 8.9e-08 60.1 51 62.7
BcaC03g13506 Brassica carinata HOM05D000023 ORTHO05D000014 8.9e-08 60.1 74 50.0
QL02p012945 Quercus lobata HOM05D000023 ORTHO05D000014 1.2e-07 59.7 51 60.8
QL03p021217 Quercus lobata HOM05D000023 ORTHO05D000014 1.2e-07 59.7 51 60.8
QL10p037399 Quercus lobata HOM05D000023 ORTHO05D000014 1.2e-07 59.7 51 60.8
TWI74G0427 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 1.2e-07 59.7 51 60.8
arahy.Tifrunner.gnm1.ann1.47Q9LE Arachis hypogaea HOM05D000023 ORTHO05D000014 1.5e-07 59.3 57 56.1
arahy.Tifrunner.gnm1.ann1.HID98C Arachis hypogaea HOM05D000023 ORTHO05D000014 1.5e-07 59.3 51 62.7
ECA233G1350 Erigeron canadensis HOM05D000023 ORTHO05D000001 1.5e-07 59.3 50 66.0
AUR62002256 Chenopodium quinoa HOM05D000074 ORTHO05D002365 2.0e-07 58.9 86 40.7
arahy.Tifrunner.gnm1.ann1.AS3ZE6 Arachis hypogaea HOM05D000023 ORTHO05D000014 2.6e-07 58.5 51 60.8
QL06p009534 Quercus lobata HOM05D000132 ORTHO05D000014 2.6e-07 58.5 51 58.8
QL07p028333 Quercus lobata HOM05D000023 ORTHO05D000014 2.6e-07 58.5 51 60.8
Sp7g14400 Schrenkiella parvula HOM05D000023 ORTHO05D000014 3.4e-07 58.2 77 45.5
TPR.G26330 Trifolium pratense HOM05D000023 ORTHO05D000014 3.4e-07 58.2 50 60.0
TPR.G510 Trifolium pratense HOM05D000023 ORTHO05D000014 3.4e-07 58.2 51 58.8
TWI74G0763 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 3.4e-07 58.2 51 58.8
arahy.Tifrunner.gnm1.ann1.0KMR65 Arachis hypogaea HOM05D000023 ORTHO05D000014 4.4e-07 57.8 51 60.8
Lj5g0002668 Lotus japonicus HOM05D000023 ORTHO05D000014 4.4e-07 57.8 49 61.2
arahy.Tifrunner.gnm1.ann1.RRIW7B Arachis hypogaea HOM05D000023 ORTHO05D000014 5.8e-07 57.4 51 60.8
AUR62006498 Chenopodium quinoa HOM05D000023 ORTHO05D000014 5.8e-07 57.4 49 57.1
AUR62010486 Chenopodium quinoa HOM05D000023 ORTHO05D000014 5.8e-07 57.4 50 60.0
AUR62017341 Chenopodium quinoa HOM05D000023 ORTHO05D000014 5.8e-07 57.4 50 60.0
AUR62019364 Chenopodium quinoa HOM05D000023 ORTHO05D000014 5.8e-07 57.4 50 60.0
AUR62022259 Chenopodium quinoa HOM05D000023 ORTHO05D000014 5.8e-07 57.4 50 60.0
AUR62024763 Chenopodium quinoa HOM05D000023 ORTHO05D000014 5.8e-07 57.4 50 60.0
AUR62030082 Chenopodium quinoa HOM05D000023 ORTHO05D000014 5.8e-07 57.4 50 60.0
AUR62032748 Chenopodium quinoa HOM05D000023 ORTHO05D000014 5.8e-07 57.4 50 60.0
AUR62033875 Chenopodium quinoa HOM05D000023 ORTHO05D000014 5.8e-07 57.4 50 60.0
AUR62035427 Chenopodium quinoa HOM05D000023 ORTHO05D000014 5.8e-07 57.4 50 60.0
AUR62035857 Chenopodium quinoa HOM05D000023 ORTHO05D000014 5.8e-07 57.4 50 60.0
AUR62039095 Chenopodium quinoa HOM05D000023 ORTHO05D000014 5.8e-07 57.4 50 60.0
AUR62044734 Chenopodium quinoa HOM05D000023 ORTHO05D000014 5.8e-07 57.4 50 60.0
COL.COLO4_20882 Corchorus olitorius HOM05D000023 ORTHO05D000014 5.8e-07 57.4 51 56.9
AUR62034670 Chenopodium quinoa HOM05D000023 ORTHO05D000014 7.5e-07 57.0 50 60.0
Glyma.03G100300 Glycine max HOM05D000023 ORTHO05D000014 7.5e-07 57.0 51 60.8
Glyma.18G197350 Glycine max HOM05D000023 ORTHO05D000014 7.5e-07 57.0 51 58.8
SHI16741 Sapria himalayana HOM05D000023 ORTHO05D000014 7.5e-07 57.0 41 70.7
AUR62010568 Chenopodium quinoa HOM05D000023 ORTHO05D000014 9.8e-07 56.6 50 60.0
AUR62016849 Chenopodium quinoa HOM05D000023 ORTHO05D000014 9.8e-07 56.6 50 58.0
QL02p042311 Quercus lobata HOM05D000023 ORTHO05D000014 9.8e-07 56.6 51 58.8
Atru.chr13.2538 Acer truncatum HOM05D000023 ORTHO05D000014 1.3e-06 56.2 45 66.7
arahy.Tifrunner.gnm1.ann1.UX9V95 Arachis hypogaea HOM05D000023 ORTHO05D000014 1.3e-06 56.2 51 58.8
ECA233G4406 Erigeron canadensis HOM05D000131 ORTHO05D000014 1.3e-06 56.2 57 56.1
BcaC09g48560 Brassica carinata HOM05D000023 ORTHO05D000014 1.7e-06 55.8 51 60.8
C05p35430 Brassica napus HOM05D000023 ORTHO05D000014 1.7e-06 55.8 51 60.8
Dinv10684 Davidia involucrata HOM05D000023 ORTHO05D000014 1.7e-06 55.8 51 56.9
HanXRQChr06g0171651 Helianthus annuus HOM05D000023 ORTHO05D000014 1.7e-06 55.8 51 58.8
PSO017G6237 Papaver somniferum HOM05D000023 ORTHO05D000014 1.7e-06 55.8 51 56.9
PSO478G0613 Papaver somniferum HOM05D000023 ORTHO05D000014 1.7e-06 55.8 51 56.9
AUR62005034 Chenopodium quinoa HOM05D000023 ORTHO05D000014 2.2e-06 55.5 49 59.2
SHI29166 Sapria himalayana HOM05D000023 ORTHO05D002750 2.2e-06 55.5 43 67.4
TPR.G17787 Trifolium pratense HOM05D000023 ORTHO05D000014 2.2e-06 55.5 50 58.0
TWI77G0487 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 2.2e-06 55.5 65 46.2
arahy.Tifrunner.gnm1.ann1.2U8NTA Arachis hypogaea HOM05D000023 ORTHO05D000014 3.7e-06 54.7 52 51.9
arahy.Tifrunner.gnm1.ann1.W2G3HI Arachis hypogaea HOM05D000023 ORTHO05D000014 3.7e-06 54.7 51 58.8
SHI27578 Sapria himalayana HOM05D000023 ORTHO05D000014 4.9e-06 54.3 30 86.7
TPR.G20605 Trifolium pratense HOM05D000023 ORTHO05D000014 4.9e-06 54.3 51 56.9
FvH4_2g16371 Fragaria vesca HOM05D000023 ORTHO05D000014 8.3e-06 53.5 51 51.0
PSO700G0308 Papaver somniferum HOM05D000023 ORTHO05D000014 8.3e-06 53.5 51 56.9


User provided reference genes

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