Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI08608 Sapria himalayana HOM05D000247 ORTHO05D000288 1.5e-59 232.6 114 100.0
Migut.O00229 Erythranthe guttata HOM05D000247 ORTHO05D003114 2.6e-08 62.4 56 46.4
Aqoxy6G01225 Aquilegia oxysepala HOM05D000247 ORTHO05D000288 4.5e-08 61.6 57 50.9
VMungo1215G1982 Vigna mungo HOM05D000247 ORTHO05D000288 2.9e-07 58.9 104 29.8
GSVIVG01008455001 Vitis vinifera HOM05D000247 ORTHO05D003114 3.8e-07 58.5 52 48.1
EL10Ac1g00593 Beta vulgaris HOM05D000247 ORTHO05D000288 6.4e-07 57.8 95 28.4
Cc10_g02320 Coffea canephora HOM05D000247 ORTHO05D000288 6.4e-07 57.8 95 33.7
Medtr5g037950 Medicago truncatula HOM05D000247 ORTHO05D000288 6.4e-07 57.8 104 29.8
TPR.G26745 Trifolium pratense HOM05D000247 ORTHO05D000288 6.4e-07 57.8 104 29.8
Cfa019632 Carpinus fangiana HOM05D000247 ORTHO05D003114 1.4e-06 56.6 52 44.2
Eucgr.H00536 Eucalyptus grandis HOM05D000247 ORTHO05D003114 1.4e-06 56.6 52 44.2
QL10p031032 Quercus lobata HOM05D000247 ORTHO05D003114 1.4e-06 56.6 52 44.2
AagrBONN_evm.TU.Sc2ySwM_117.1964 Anthoceros agrestis HOM05D000247 ORTHO05D000288 1.9e-06 56.2 57 47.4
CANSAT11G2653 Cannabis sativa HOM05D000247 ORTHO05D000288 1.9e-06 56.2 95 33.7
Glyma.01G041200 Glycine max HOM05D000247 ORTHO05D000288 1.9e-06 56.2 104 27.9
Lsat_1_v5_gn_4_116761 Lactuca sativa HOM05D000247 ORTHO05D000288 1.9e-06 56.2 58 44.8
Lj2g0021816 Lotus japonicus HOM05D000247 ORTHO05D000288 1.9e-06 56.2 104 27.9
GSVIVG01009792001 Vitis vinifera HOM05D000247 ORTHO05D000288 1.9e-06 56.2 95 32.6
GSVIVG01009794001 Vitis vinifera HOM05D000247 ORTHO05D000288 1.9e-06 56.2 95 32.6
ATR0753G140 Amborella trichopoda HOM05D000247 ORTHO05D000288 2.4e-06 55.8 52 46.2
AagrBONN_evm.TU.Sc2ySwM_368.715 Anthoceros agrestis HOM05D000247 ORTHO05D000288 2.4e-06 55.8 57 47.4
AT1G69880 Arabidopsis thaliana HOM05D000247 ORTHO05D000288 2.4e-06 55.8 57 42.1
CiPaw.16G096400 Carya illinoinensis HOM05D000247 ORTHO05D003114 2.4e-06 55.8 52 44.2
Glyma.18G255200 Glycine max HOM05D000247 ORTHO05D000288 2.4e-06 55.8 53 43.4
Manes.06G004100 Manihot esculenta HOM05D000247 ORTHO05D003114 2.4e-06 55.8 52 46.2
PSO541G2362 Papaver somniferum HOM05D000247 ORTHO05D000288 2.4e-06 55.8 57 43.9
PSO675G2845 Papaver somniferum HOM05D000247 ORTHO05D000288 2.4e-06 55.8 57 43.9
Prupe.5G235200 Prunus persica HOM05D000247 ORTHO05D003114 2.4e-06 55.8 57 43.9
Actinidia09071 Actinidia chinensis HOM05D000247 ORTHO05D003114 3.2e-06 55.5 52 46.2
Glyma.01G041100 Glycine max HOM05D000247 ORTHO05D000288 3.2e-06 55.5 109 25.7
SHI08607 Sapria himalayana HOM05D000247 ORTHO05D000288 3.2e-06 55.5 58 43.1
CBR_g30929 Chara braunii HOM05D000247 ORTHO05D000288 4.2e-06 55.1 59 45.8
DCAR_022451 Daucus carota HOM05D000247 ORTHO05D000288 4.2e-06 55.1 95 30.5
PRCOL_00005210 Prasinoderma coloniale HOM05D000247 ORTHO05D000288 4.2e-06 55.1 62 38.7
Sed0016757 Sechium edule HOM05D000247 ORTHO05D000288 4.2e-06 55.1 57 49.1
TWI81G0294 Tripterygium wilfordii HOM05D000247 ORTHO05D003114 4.2e-06 55.1 96 31.2
Aa31LG2G10500 Aethionema arabicum HOM05D000247 ORTHO05D000288 5.5e-06 54.7 107 28.0
MELO3C010974.2 Cucumis melo HOM05D000247 ORTHO05D000288 5.5e-06 54.7 57 40.4
Dinv04600 Davidia involucrata HOM05D000247 ORTHO05D003114 5.5e-06 54.7 52 42.3
Lsat_1_v5_gn_4_116621 Lactuca sativa HOM05D000247 ORTHO05D000288 5.5e-06 54.7 57 40.4
Peaxi162Scf00314g00329 Petunia axillaris HOM05D000247 ORTHO05D003114 5.5e-06 54.7 52 46.2
SEGI_06061 Sequoiadendron giganteum HOM05D000247 ORTHO05D000288 5.5e-06 54.7 57 45.6
TWI18G1122 Tripterygium wilfordii HOM05D000247 ORTHO05D000288 5.5e-06 54.7 97 32.0
TAR374G0622 Trochodendron aralioides HOM05D000247 ORTHO05D000288 5.5e-06 54.7 97 34.0
AL22U10100 Arabidopsis lyrata HOM05D000247 ORTHO05D000288 7.1e-06 54.3 57 38.6
CDE06G1703 Ceratophyllum demersum HOM05D000247 ORTHO05D008926 7.1e-06 54.3 59 44.1
Duzib041G0550 Durio zibethinus HOM05D000247 ORTHO05D000288 7.1e-06 54.3 102 32.4
Duzib114G0701 Durio zibethinus HOM05D000247 ORTHO05D000288 7.1e-06 54.3 53 45.3
Eucgr.J02387 Eucalyptus grandis HOM05D000247 ORTHO05D000288 7.1e-06 54.3 104 30.8
FvH4_5g17540 Fragaria vesca HOM05D000247 ORTHO05D003114 7.1e-06 54.3 57 42.1
FAN04G0502 Fragaria x ananassa HOM05D000247 ORTHO05D003114 7.1e-06 54.3 57 42.1
FAN13G1410 Fragaria x ananassa HOM05D000247 ORTHO05D003114 7.1e-06 54.3 57 42.1
FAN18G1699 Fragaria x ananassa HOM05D000247 ORTHO05D003114 7.1e-06 54.3 57 42.1
Glyma.02G023100 Glycine max HOM05D000247 ORTHO05D000288 7.1e-06 54.3 109 25.7
Gohir.A06G180500 Gossypium hirsutum HOM05D000247 ORTHO05D000288 7.1e-06 54.3 53 47.2
Gohir.D06G187300 Gossypium hirsutum HOM05D000247 ORTHO05D000288 7.1e-06 54.3 53 47.2
Gorai.010G219600 Gossypium raimondii HOM05D000247 ORTHO05D000288 7.1e-06 54.3 53 47.2
Lj2g0012571 Lotus japonicus HOM05D000247 ORTHO05D000288 7.1e-06 54.3 109 25.7
Lj4g0027483 Lotus japonicus HOM05D000247 ORTHO05D008926 7.1e-06 54.3 62 40.3
SalBow5G4045 Salvia bowleyana HOM05D000247 ORTHO05D003114 7.1e-06 54.3 57 45.6
SalBow8G4785 Salvia bowleyana HOM05D000247 ORTHO05D000288 7.1e-06 54.3 109 30.3
TWI75G1259 Tripterygium wilfordii HOM05D000247 ORTHO05D000288 7.1e-06 54.3 97 33.0
TAR374G1523 Trochodendron aralioides HOM05D000247 ORTHO05D000288 7.1e-06 54.3 97 34.0
unitig_26.g9840 Utricularia gibba HOM05D000247 ORTHO05D000288 7.1e-06 54.3 58 43.1
arahy.Tifrunner.gnm1.ann1.MKWV73 Arachis hypogaea HOM05D000247 ORTHO05D003114 9.3e-06 53.9 52 44.2
BcaB03g14765 Brassica carinata HOM05D000247 ORTHO05D000288 9.3e-06 53.9 57 40.4
Carub.0002s1658 Capsella rubella HOM05D000247 ORTHO05D000288 9.3e-06 53.9 57 38.6
Ciclev10002859m.g Citrus clementina HOM05D000247 ORTHO05D000288 9.3e-06 53.9 107 29.0
Cc00_g32010 Coffea canephora HOM05D000247 ORTHO05D000288 9.3e-06 53.9 107 29.9
DCAR_003538 Daucus carota HOM05D000247 ORTHO05D003114 9.3e-06 53.9 53 47.2
DCAR_017326 Daucus carota HOM05D000247 ORTHO05D000288 9.3e-06 53.9 109 25.7
Glyma.02G023000 Glycine max HOM05D000247 ORTHO05D000288 9.3e-06 53.9 107 26.2
Gohir.A03G080200 Gossypium hirsutum HOM05D000247 ORTHO05D000288 9.3e-06 53.9 97 34.0
Lj4g0002480 Lotus japonicus HOM05D000247 ORTHO05D003114 9.3e-06 53.9 52 42.3
Nitab4.5_0001264g0120 Nicotiana tabacum HOM05D000247 ORTHO05D003114 9.3e-06 53.9 57 47.4
Os07g0186000 Oryza sativa ssp. japonica HOM05D000247 ORTHO05D000288 9.3e-06 53.9 57 42.1
Potri.012G045000 Populus trichocarpa HOM05D000247 ORTHO05D003114 9.3e-06 53.9 52 42.3
Sed0023214 Sechium edule HOM05D000247 ORTHO05D000288 9.3e-06 53.9 109 30.3
Hund05922 Selenicereus undatus HOM05D000247 ORTHO05D000288 9.3e-06 53.9 109 27.5
TAR374G1601 Trochodendron aralioides HOM05D000247 ORTHO05D000288 9.3e-06 53.9 97 34.0
VMungo0647G2087 Vigna mungo HOM05D000247 ORTHO05D000288 9.3e-06 53.9 58 39.7


User provided reference genes

Program Settings