Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI08598 Sapria himalayana HOM05D005163 ORTHO05D006462 2.7e-61 238.4 116 100.0
Dinv40040 Davidia involucrata HOM05D005163 ORTHO05D006462 3.6e-21 105.1 87 62.1
Actinidia26108 Actinidia chinensis HOM05D005163 ORTHO05D006462 3.0e-20 102.1 87 59.8
CSS0019296 Camellia sinensis var. sinensis HOM05D005163 ORTHO05D006462 8.8e-20 100.5 87 58.6
Cpa.g.sc6.195 Carica papaya HOM05D005163 ORTHO05D006462 8.8e-20 100.5 87 59.8
ClCG01G020030 Citrullus lanatus HOM05D005163 ORTHO05D006462 8.8e-20 100.5 87 56.3
Manes.02G100000 Manihot esculenta HOM05D005163 ORTHO05D006462 1.2e-19 100.1 87 58.6
Actinidia19230 Actinidia chinensis HOM05D005163 ORTHO05D006462 2.0e-19 99.4 85 58.8
Ciclev10025040m.g Citrus clementina HOM05D005163 ORTHO05D006462 2.6e-19 99.0 87 57.5
PGR102G2820 Punica granatum HOM05D005163 ORTHO05D006462 5.7e-19 97.8 87 57.5
Sed0007947 Sechium edule HOM05D005163 ORTHO05D006462 7.5e-19 97.4 86 57.0
Dinv33585 Davidia involucrata HOM05D005163 ORTHO05D006462 9.7e-19 97.1 84 59.5
SalBow8G4654 Salvia bowleyana HOM05D005163 ORTHO05D006462 9.7e-19 97.1 85 57.6
MELO3C007876.2 Cucumis melo HOM05D005163 ORTHO05D006462 1.3e-18 96.7 87 56.3
Sed0022975 Sechium edule HOM05D005163 ORTHO05D006462 1.3e-18 96.7 87 55.2
Aqoxy5G01510 Aquilegia oxysepala HOM05D005163 ORTHO05D006462 1.7e-18 96.3 86 55.8
CsaV3_6G046790 Cucumis sativus L. HOM05D005163 ORTHO05D006462 1.7e-18 96.3 87 55.2
TAR376G0780 Trochodendron aralioides HOM05D005163 ORTHO05D006462 1.7e-18 96.3 87 55.2
Carub.0005s1745 Capsella rubella HOM05D005163 ORTHO05D006462 2.8e-18 95.5 87 56.3
CARHR160630 Cardamine hirsuta HOM05D005163 ORTHO05D006462 2.8e-18 95.5 87 56.3
Migut.H02494 Erythranthe guttata HOM05D005163 ORTHO05D006462 2.8e-18 95.5 86 57.0
Thhalv10010167m.g Eutrema salsugineum HOM05D005163 ORTHO05D006462 2.8e-18 95.5 86 55.8
Hma1.2p1_0913F.1_g236050 Hydrangea macrophylla HOM05D005163 ORTHO05D006462 2.8e-18 95.5 84 57.1
Lalb_Chr05g0212611 Lupinus albus HOM05D005163 ORTHO05D006462 2.8e-18 95.5 85 57.6
Cfa006924 Carpinus fangiana HOM05D005163 ORTHO05D006462 3.7e-18 95.1 87 55.2
Oeu005146.2 Olea europaea HOM05D005163 ORTHO05D006462 3.7e-18 95.1 87 55.2
PSO541G1023 Papaver somniferum HOM05D005163 ORTHO05D006462 3.7e-18 95.1 87 56.3
Ca_24882_v3 Cicer arietinum L. HOM05D005163 ORTHO05D006462 4.8e-18 94.7 87 56.3
Haze_03825 Corylus avellana HOM05D005163 ORTHO05D006462 4.8e-18 94.7 87 55.2
Psat2g156920 Pisum sativum HOM05D005163 ORTHO05D006462 4.8e-18 94.7 87 56.3
TPR.G2381 Trifolium pratense HOM05D005163 ORTHO05D006462 4.8e-18 94.7 86 57.0
AL5G31470 Arabidopsis lyrata HOM05D005163 ORTHO05D006462 6.3e-18 94.4 87 55.2
AT3G51050 Arabidopsis thaliana HOM05D005163 ORTHO05D006462 6.3e-18 94.4 87 55.2
GSVIVG01018847001 Vitis vinifera HOM05D005163 ORTHO05D006462 6.3e-18 94.4 86 54.7
PSO675G4614 Papaver somniferum HOM05D005163 ORTHO05D006462 8.3e-18 94.0 87 55.2
Lj2g0010053 Lotus japonicus HOM05D005163 ORTHO05D006462 1.1e-17 93.6 87 55.2
Medtr5g021150 Medicago truncatula HOM05D005163 ORTHO05D006462 1.1e-17 93.6 86 54.7
Nitab4.5_0000723g0040 Nicotiana tabacum HOM05D005163 ORTHO05D006462 1.1e-17 93.6 86 58.1
Sabra07G0015000 Salix brachista HOM05D005163 ORTHO05D006462 1.1e-17 93.6 85 55.3
Eucgr.J02388 Eucalyptus grandis HOM05D005163 ORTHO05D006462 1.4e-17 93.2 87 52.9
Sp5g11160 Schrenkiella parvula HOM05D005163 ORTHO05D006462 1.4e-17 93.2 85 56.5
Glyma.01G170600 Glycine max HOM05D005163 ORTHO05D006462 1.8e-17 92.8 87 54.0
Atru.chr3.745 Acer truncatum HOM05D005163 ORTHO05D006462 2.4e-17 92.4 87 52.9
Potri.005G118300 Populus trichocarpa HOM05D005163 ORTHO05D006462 2.4e-17 92.4 86 55.8
RcHm_v2.0_Chr2g0100261 Rosa chinensis HOM05D005163 ORTHO05D006462 2.4e-17 92.4 87 55.2
Nitab4.5_0007070g0020 Nicotiana tabacum HOM05D005163 ORTHO05D006462 3.1e-17 92.0 86 57.0
Rhsim08G0123900 Rhododendron simsii HOM05D005163 ORTHO05D006462 3.1e-17 92.0 85 54.1
Cc07_g10240 Coffea canephora HOM05D005163 ORTHO05D006462 4.1e-17 91.7 86 54.7
Duzib187G1632 Durio zibethinus HOM05D005163 ORTHO05D006462 4.1e-17 91.7 87 54.0
QL06p034609 Quercus lobata HOM05D005163 ORTHO05D006462 4.1e-17 91.7 87 51.7
VMungo1215G3295 Vigna mungo HOM05D005163 ORTHO05D006462 4.1e-17 91.7 87 51.7
Aa31LG4G19160 Aethionema arabicum HOM05D005163 ORTHO05D006462 5.3e-17 91.3 87 52.9
arahy.Tifrunner.gnm1.ann1.U2HICA Arachis hypogaea HOM05D005163 ORTHO05D006462 5.3e-17 91.3 87 52.9
arahy.Tifrunner.gnm1.ann1.U51VHD Arachis hypogaea HOM05D005163 ORTHO05D006462 5.3e-17 91.3 87 52.9
Peaxi162Scf00084g01221 Petunia axillaris HOM05D005163 ORTHO05D006462 5.3e-17 91.3 87 55.2
Phvul.002G166800 Phaseolus vulgaris HOM05D005163 ORTHO05D006462 5.3e-17 91.3 87 52.9
Potri.007G017600 Populus trichocarpa HOM05D005163 ORTHO05D006462 5.3e-17 91.3 86 54.7
SGA_v2.0_scaffold280G46851 Striga asiatica HOM05D005163 ORTHO05D006462 5.3e-17 91.3 86 53.5
Sc03g0003300 Simmondsia chinensis HOM05D005163 ORTHO05D006462 7.0e-17 90.9 84 54.8
Oeu024029.1 Olea europaea HOM05D005163 ORTHO05D006462 9.1e-17 90.5 85 54.1
BcaC06g33060 Brassica carinata HOM05D005163 ORTHO05D006462 1.6e-16 89.7 85 51.8
A03p48100 Brassica napus HOM05D005163 ORTHO05D006462 1.6e-16 89.7 85 51.8
COL.COLO4_21984 Corchorus olitorius HOM05D005163 ORTHO05D006462 1.6e-16 89.7 87 54.0
Lj4C212G4 Lonicera japonica HOM05D005163 ORTHO05D006462 1.6e-16 89.7 86 53.5
Lalb_Chr16g0377681 Lupinus albus HOM05D005163 ORTHO05D006462 1.6e-16 89.7 87 54.0
Sabra05G0097300 Salix brachista HOM05D005163 ORTHO05D006462 1.6e-16 89.7 89 52.8
THA.LOC104826639 Tarenaya hassleriana HOM05D005163 ORTHO05D006462 1.6e-16 89.7 86 53.5
Thecc.01G025400 Theobroma cacao HOM05D005163 ORTHO05D006462 1.6e-16 89.7 86 53.5
Gohir.A11G178900 Gossypium hirsutum HOM05D005163 ORTHO05D006462 2.0e-16 89.4 86 53.5
Gohir.D11G186500 Gossypium hirsutum HOM05D005163 ORTHO05D006462 2.0e-16 89.4 86 53.5
Gorai.007G198300 Gossypium raimondii HOM05D005163 ORTHO05D006462 2.0e-16 89.4 86 53.5
Hund16465 Selenicereus undatus HOM05D005163 ORTHO05D006462 2.7e-16 89.0 96 52.1
vmacro17732 Vaccinium macrocarpon HOM05D005163 ORTHO05D006462 2.7e-16 89.0 89 52.8
C07p46120 Brassica napus HOM05D005163 ORTHO05D006462 3.5e-16 88.6 85 50.6
BolC7t45128H Brassica oleracea HOM05D005163 ORTHO05D006462 3.5e-16 88.6 85 50.6
Gohir.A12G062100 Gossypium hirsutum HOM05D005163 ORTHO05D006462 3.5e-16 88.6 86 54.7
Gorai.008G065200 Gossypium raimondii HOM05D005163 ORTHO05D006462 3.5e-16 88.6 86 54.7
Solyc02g084690.3 Solanum lycopersicum HOM05D005163 ORTHO05D006462 3.5e-16 88.6 87 54.0
Sopen02g029360 Solanum pennellii HOM05D005163 ORTHO05D006462 3.5e-16 88.6 87 54.0
CAN.G358.18 Capsicum annuum HOM05D005163 ORTHO05D006462 4.5e-16 88.2 86 53.5
ECA238G0541 Erigeron canadensis HOM05D005163 ORTHO05D006462 5.9e-16 87.8 87 54.0
PGSC0003DMG400003539 Solanum tuberosum HOM05D005163 ORTHO05D006462 5.9e-16 87.8 87 54.0
FAN23G1678 Fragaria x ananassa HOM05D005163 ORTHO05D006462 7.7e-16 87.4 87 52.9
HanXRQChr14g0441521 Helianthus annuus HOM05D005163 ORTHO05D006462 7.7e-16 87.4 87 52.9
MSTRG.23270 Avicennia marina HOM05D005163 ORTHO05D006462 1.0e-15 87.0 85 49.4
Gohir.D12G062000 Gossypium hirsutum HOM05D005163 ORTHO05D006462 1.0e-15 87.0 86 53.5
MD02G1137100 Malus domestica HOM05D005163 ORTHO05D006462 1.0e-15 87.0 86 52.3
Ah.02g124830 Amaranthus hybridus HOM05D005163 ORTHO05D006462 1.3e-15 86.7 83 51.8
Duzib147G0248 Durio zibethinus HOM05D005163 ORTHO05D006462 1.3e-15 86.7 87 49.4
FAN28G1722 Fragaria x ananassa HOM05D005163 ORTHO05D006462 1.3e-15 86.7 87 52.9
Prupe.7G163500 Prunus persica HOM05D005163 ORTHO05D006462 1.3e-15 86.7 85 54.1
Lsat_1_v5_gn_2_78240 Lactuca sativa HOM05D005163 ORTHO05D006462 1.7e-15 86.3 87 52.9
FvH4_1g12400 Fragaria vesca HOM05D005163 ORTHO05D006462 2.2e-15 85.9 87 52.9
FAN19G3097 Fragaria x ananassa HOM05D005163 ORTHO05D006462 2.2e-15 85.9 87 52.9
MD15G1250800 Malus domestica HOM05D005163 ORTHO05D006462 2.2e-15 85.9 86 52.3
Glyma.11G072700 Glycine max HOM05D005163 ORTHO05D006462 3.8e-15 85.1 84 52.4
HanXRQChr07g0191281 Helianthus annuus HOM05D005163 ORTHO05D006462 3.8e-15 85.1 86 51.2
HPP92_021000 Vanilla planifolia HOM05D005163 ORTHO05D006462 3.8e-15 85.1 87 50.6
EL10As8g23870 Beta vulgaris HOM05D005163 ORTHO05D006462 8.5e-15 84.0 84 51.2
Os02g0100700 Oryza sativa ssp. japonica HOM05D005163 ORTHO05D006462 1.1e-14 83.6 86 51.2
TWI73G0422 Tripterygium wilfordii HOM05D005163 ORTHO05D006462 1.5e-14 83.2 88 50.0
unitig_699.g19557 Utricularia gibba HOM05D005163 ORTHO05D006462 1.9e-14 82.8 85 51.8
CiPaw.07G054500 Carya illinoinensis HOM05D005163 ORTHO05D006462 2.5e-14 82.4 86 47.7
AUR62007635 Chenopodium quinoa HOM05D005163 ORTHO05D006462 3.2e-14 82.0 87 48.3
CANSAT01G3091 Cannabis sativa HOM05D005163 ORTHO05D006462 5.5e-14 81.3 87 50.6
AUR62004121 Chenopodium quinoa HOM05D005163 ORTHO05D006462 5.5e-14 81.3 88 47.7
DCAR_031672 Daucus carota HOM05D005163 ORTHO05D006462 7.2e-14 80.9 84 52.4
CDE04G3147 Ceratophyllum demersum HOM05D005163 ORTHO05D006462 2.7e-13 79.0 87 47.1
ATR0661G156 Amborella trichopoda HOM05D005163 ORTHO05D006462 3.6e-13 78.6 87 44.8
Zm00001eb228990 Zea mays HOM05D005163 ORTHO05D006462 8.8e-12 73.9 86 45.3
Mapoly0159s0016 Marchantia polymorpha HOM05D005163 ORTHO05D006462 8.3e-10 67.4 76 47.4
AagrBONN_evm.TU.Sc2ySwM_368.2341 Anthoceros agrestis HOM05D005163 ORTHO05D006462 3.8e-07 58.5 84 35.7
Pp3c2_36750 Physcomitrium patens HOM05D005163 ORTHO05D006462 3.8e-07 58.5 76 39.5
Pp3c2_36751 Physcomitrium patens HOM05D005163 ORTHO05D006462 3.8e-07 58.5 76 39.5
Pp3c11_13530 Physcomitrium patens HOM05D005163 ORTHO05D006462 6.6e-07 57.8 85 36.5
MBI01_g27921_MAGBIO Magnolia biondii HOM05D005163 ORTHO05D006462 4.2e-06 55.1 37 54.1
Pp3c2_37540 Physcomitrium patens HOM05D005163 ORTHO05D006462 4.2e-06 55.1 76 36.8
MBI01_g27920_MAGBIO Magnolia biondii HOM05D005163 ORTHO05D000004 7.2e-06 54.3 33 75.8
Hund14017 Selenicereus undatus HOM05D005163 ORTHO05D006462 9.5e-06 53.9 66 42.4


User provided reference genes

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