Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI08594 Sapria himalayana HOM05D026647 ORTHO05D365736 9.3e-71 270.0 128 100.0
SHI32453 Sapria himalayana HOM05D026647 ORTHO05D366018 1.3e-11 73.6 48 70.8
SHI00381 Sapria himalayana HOM05D000002 ORTHO05D364812 5.4e-10 68.2 45 68.9
SGA_v2.0_scaffold48G17859 Striga asiatica HOM05D000002 ORTHO05D000001 2.7e-09 65.9 44 68.2
SGA_v2.0_scaffold43G16507 Striga asiatica HOM05D000002 ORTHO05D000001 3.5e-09 65.5 44 68.2
SHI16758 Sapria himalayana HOM05D000002 ORTHO05D000001 4.5e-09 65.1 51 62.7
SHI06379 Sapria himalayana HOM05D001083 ORTHO05D006562 5.9e-09 64.7 45 64.4
Sopen01g011790 Solanum pennellii HOM05D000002 ORTHO05D000001 2.2e-08 62.8 44 65.9
Sopen09g020870 Solanum pennellii HOM05D000002 ORTHO05D000001 2.2e-08 62.8 44 65.9
Sopen10g013010 Solanum pennellii HOM05D000002 ORTHO05D000001 2.9e-08 62.4 64 56.2
CAN.G198.13 Capsicum annuum HOM05D000002 ORTHO05D000001 5.0e-08 61.6 63 54.0
Sopen12g025060 Solanum pennellii HOM05D000002 ORTHO05D000001 5.0e-08 61.6 64 56.2
MELO3C028478.2 Cucumis melo HOM05D000002 ORTHO05D000001 6.5e-08 61.2 44 63.6
SHI07102 Sapria himalayana HOM05D000002 ORTHO05D365083 1.1e-07 60.5 45 60.0
TAR121G0004 Trochodendron aralioides HOM05D000002 ORTHO05D000001 1.1e-07 60.5 44 63.6
SHI00673 Sapria himalayana HOM05D000002 ORTHO05D014187 1.5e-07 60.1 65 50.8
SHI14598 Sapria himalayana HOM05D000002 ORTHO05D014187 1.5e-07 60.1 44 61.4
CSS0014164 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.9e-07 59.7 44 63.6
Sopen05g014770 Solanum pennellii HOM05D000002 ORTHO05D000001 1.9e-07 59.7 64 54.7
Sopen10g028200 Solanum pennellii HOM05D000002 ORTHO05D000001 1.9e-07 59.7 64 54.7
SHI01953 Sapria himalayana HOM05D000002 ORTHO05D000001 3.2e-07 58.9 45 62.2
SHI07193 Sapria himalayana HOM05D000002 ORTHO05D022395 4.2e-07 58.5 45 62.2
Sopen08g016360 Solanum pennellii HOM05D000002 ORTHO05D000001 4.2e-07 58.5 44 61.4
CSS0027517 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.2e-07 57.8 44 61.4
Sopen08g011630 Solanum pennellii HOM05D000002 ORTHO05D000001 9.4e-07 57.4 43 60.5
SHI05504 Sapria himalayana HOM05D000002 ORTHO05D000001 1.6e-06 56.6 45 55.6
MELO3C032084.2 Cucumis melo HOM05D000002 ORTHO05D000001 2.7e-06 55.8 44 61.4
TWI60G0395 Tripterygium wilfordii HOM05D000002 ORTHO05D000001 2.7e-06 55.8 40 62.5
TWI75G1623 Tripterygium wilfordii HOM05D000002 ORTHO05D000001 2.7e-06 55.8 40 62.5
SHI06516 Sapria himalayana HOM05D000002 ORTHO05D000001 3.6e-06 55.5 57 52.6
SHI07500 Sapria himalayana HOM05D000002 ORTHO05D000001 3.6e-06 55.5 53 54.7
ClCG02G011100 Citrullus lanatus HOM05D000002 ORTHO05D000001 4.7e-06 55.1 44 56.8
SHI14642 Sapria himalayana HOM05D000002 ORTHO05D000001 4.7e-06 55.1 44 56.8
SHI28565 Sapria himalayana HOM05D000002 ORTHO05D370251 6.1e-06 54.7 84 36.9
Sopen06g018510 Solanum pennellii HOM05D000002 ORTHO05D000001 6.1e-06 54.7 40 62.5
CSS0002104 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 8.0e-06 54.3 35 65.7
CSS0002770 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 8.0e-06 54.3 35 65.7
CSS0024977 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 8.0e-06 54.3 35 65.7
CSS0044467 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 8.0e-06 54.3 35 65.7
PGR031G1068 Punica granatum HOM05D000002 ORTHO05D000001 8.0e-06 54.3 44 61.4


User provided reference genes

Program Settings