Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI08591 Sapria himalayana HOM05D007510 ORTHO05D009587 8.1e-41 169.9 79 100.0
Aa31LG1G14840 Aethionema arabicum HOM05D007510 ORTHO05D009587 4.8e-17 90.9 58 65.5
Ah.02g124790 Amaranthus hybridus HOM05D007510 ORTHO05D009587 6.9e-16 87.0 69 58.0
C09p59910 Brassica napus HOM05D007510 ORTHO05D009587 1.5e-15 85.9 66 57.6
BolC9t58827H Brassica oleracea HOM05D007510 ORTHO05D009587 1.5e-15 85.9 66 57.6
Lsat_1_v5_gn_4_151140 Lactuca sativa HOM05D007510 ORTHO05D009587 3.4e-15 84.7 70 54.3
BcaC04g18811 Brassica carinata HOM05D007510 ORTHO05D009587 4.5e-15 84.3 66 56.1
ClCG01G020060 Citrullus lanatus HOM05D007510 ORTHO05D000703 4.5e-15 84.3 54 64.8
COL.COLO4_21980 Corchorus olitorius HOM05D001094 ORTHO05D001050 4.5e-15 84.3 66 59.1
Ciclev10026716m.g Citrus clementina HOM05D007510 ORTHO05D009587 7.6e-15 83.6 64 57.8
HanXRQChr11g0325681 Helianthus annuus HOM05D007510 ORTHO05D009587 7.6e-15 83.6 59 57.6
HanXRQChr15g0494821 Helianthus annuus HOM05D007510 ORTHO05D009587 1.3e-14 82.8 72 50.0
CiPaw.04G025800 Carya illinoinensis HOM05D007510 ORTHO05D009587 1.7e-14 82.4 68 57.4
Aa31LG11G5850 Aethionema arabicum HOM05D007510 ORTHO05D009587 2.2e-14 82.0 57 63.2
A02p04090 Brassica napus HOM05D007510 ORTHO05D009587 2.2e-14 82.0 51 60.8
A10p22120 Brassica napus HOM05D007510 ORTHO05D009587 3.8e-14 81.3 62 59.7
BraA10t44271Z Brassica rapa HOM05D007510 ORTHO05D009587 3.8e-14 81.3 62 59.7
Sp6g26950 Schrenkiella parvula HOM05D007510 ORTHO05D009587 4.9e-14 80.9 64 53.1
TPR.G21530 Trifolium pratense HOM05D007510 ORTHO05D009587 6.4e-14 80.5 66 59.1
CiPaw.08G136300 Carya illinoinensis HOM05D007510 ORTHO05D009587 8.4e-14 80.1 66 59.1
Medtr8g076660 Medicago truncatula HOM05D007510 ORTHO05D009587 1.1e-13 79.7 63 54.0
BraA02t05372Z Brassica rapa HOM05D007510 ORTHO05D009587 1.4e-13 79.3 48 66.7
Sc16g0002400 Simmondsia chinensis HOM05D007510 ORTHO05D009587 1.4e-13 79.3 50 66.0
Oeu037724.1 Olea europaea HOM05D007510 ORTHO05D009587 1.9e-13 79.0 55 61.8
Oeu037725.1 Olea europaea HOM05D007510 ORTHO05D009587 1.9e-13 79.0 55 61.8
Thhalv10014934m.g Eutrema salsugineum HOM05D007510 ORTHO05D009587 2.4e-13 78.6 81 49.4
Carub.0006s1547 Capsella rubella HOM05D007510 ORTHO05D009587 3.2e-13 78.2 50 66.0
Lj4g0024164 Lotus japonicus HOM05D007510 ORTHO05D009587 3.2e-13 78.2 43 74.4
AUR62007639 Chenopodium quinoa HOM05D007510 ORTHO05D009587 5.4e-13 77.4 69 53.6
MELO3C007880.2 Cucumis melo HOM05D007510 ORTHO05D009587 7.1e-13 77.0 62 56.5
CsaV3_6G046830 Cucumis sativus L. HOM05D007510 ORTHO05D009587 7.1e-13 77.0 72 54.2
BcaB08g36792 Brassica carinata HOM05D007510 ORTHO05D009587 9.3e-13 76.6 66 53.0
AL6G28360 Arabidopsis lyrata HOM05D007510 ORTHO05D009587 1.2e-12 76.3 46 67.4
ECA232G0818 Erigeron canadensis HOM05D001094 ORTHO05D001050 1.2e-12 76.3 70 54.3
vmacro22104 Vaccinium macrocarpon HOM05D007510 ORTHO05D009587 1.2e-12 76.3 66 56.1
BcaNung00409 Brassica carinata HOM05D007510 ORTHO05D009587 2.1e-12 75.5 66 50.0
VMungo0251G3154 Vigna mungo HOM05D007510 ORTHO05D009587 2.1e-12 75.5 58 58.6
Solyc02g084650.3 Solanum lycopersicum HOM05D007510 ORTHO05D009587 2.7e-12 75.1 61 52.5
Sopen02g029320 Solanum pennellii HOM05D007510 ORTHO05D009587 2.7e-12 75.1 61 52.5
PGSC0003DMG400003618 Solanum tuberosum HOM05D007510 ORTHO05D009587 2.7e-12 75.1 48 62.5
CSS0038414 Camellia sinensis var. sinensis HOM05D007510 ORTHO05D009587 3.5e-12 74.7 50 60.0
Nn6g32199 Nelumbo nucifera HOM05D007510 ORTHO05D009587 3.5e-12 74.7 68 51.5
AT5G17280 Arabidopsis thaliana HOM05D007510 ORTHO05D009587 4.6e-12 74.3 66 51.5
Rhsim08G0036700 Rhododendron simsii HOM05D007510 ORTHO05D009587 4.6e-12 74.3 48 64.6
Glyma.02G052200 Glycine max HOM05D007510 ORTHO05D009587 6.0e-12 73.9 37 75.7
Migut.H02491 Erythranthe guttata HOM05D007510 ORTHO05D009587 7.9e-12 73.6 54 57.4
SalBow5G2055 Salvia bowleyana HOM05D007510 ORTHO05D009587 7.9e-12 73.6 47 66.0
unitig_27.g25318 Utricularia gibba HOM05D007510 ORTHO05D009587 7.9e-12 73.6 35 80.0
Actinidia26112 Actinidia chinensis HOM05D007510 ORTHO05D009587 1.0e-11 73.2 42 69.0
Lalb_Chr05g0229951 Lupinus albus HOM05D007510 ORTHO05D009587 1.0e-11 73.2 51 58.8
Nitab4.5_0002266g0030 Nicotiana tabacum HOM05D007510 ORTHO05D009587 1.0e-11 73.2 64 50.0
CAN.G358.14 Capsicum annuum HOM05D007510 ORTHO05D009587 1.3e-11 72.8 53 54.7
Nitab4.5_0012525g0020 Nicotiana tabacum HOM05D007510 ORTHO05D009587 1.3e-11 72.8 50 60.0
arahy.Tifrunner.gnm1.ann1.X6BQPF Arachis hypogaea HOM05D007510 ORTHO05D009587 2.3e-11 72.0 58 50.0
Gohir.A02G168700 Gossypium hirsutum HOM05D007510 ORTHO05D009587 2.3e-11 72.0 64 54.7
Gohir.D03G011300 Gossypium hirsutum HOM05D007510 ORTHO05D009587 3.0e-11 71.6 64 54.7
Gorai.003G011700 Gossypium raimondii HOM05D007510 ORTHO05D009587 3.0e-11 71.6 64 54.7
Os09g0530900 Oryza sativa ssp. japonica HOM05D007510 ORTHO05D009587 3.9e-11 71.2 46 67.4
Psat4g096640 Pisum sativum HOM05D007510 ORTHO05D009587 3.9e-11 71.2 61 47.5
FAN28G2971 Fragaria x ananassa HOM05D007510 ORTHO05D009587 6.7e-11 70.5 62 54.8
Prupe.7G163800 Prunus persica HOM05D007510 ORTHO05D000703 6.7e-11 70.5 70 54.3
Nn5g29177 Nelumbo nucifera HOM05D007510 ORTHO05D009587 1.1e-10 69.7 61 50.8
Cpa.g.sc6.200 Carica papaya HOM05D007510 ORTHO05D009587 1.5e-10 69.3 82 45.1
MD02G1136700 Malus domestica HOM05D007510 ORTHO05D000703 1.9e-10 68.9 43 69.8
PGR102G2493 Punica granatum HOM05D007510 ORTHO05D009587 1.9e-10 68.9 37 70.3
TAR625G1319 Trochodendron aralioides HOM05D007510 ORTHO05D009587 1.9e-10 68.9 37 70.3
EL10As8g23866 Beta vulgaris HOM05D007510 ORTHO05D009587 2.5e-10 68.6 33 75.8
BcaC03g18546 Brassica carinata HOM05D007510 ORTHO05D009587 3.3e-10 68.2 58 51.7
Thecc.01G024800 Theobroma cacao HOM05D007510 ORTHO05D009587 3.3e-10 68.2 44 63.6
Duzib264G0517 Durio zibethinus HOM05D007510 ORTHO05D009587 4.3e-10 67.8 44 63.6
Hma1.2p1_0266F.1_g107010 Hydrangea macrophylla HOM05D007510 ORTHO05D009587 4.3e-10 67.8 64 46.9
C02p08940 Brassica napus HOM05D007510 ORTHO05D009587 5.6e-10 67.4 31 80.6
BolC2t06803H Brassica oleracea HOM05D007510 ORTHO05D009587 5.6e-10 67.4 31 80.6
Manes.02G175500 Manihot esculenta HOM05D007510 ORTHO05D009587 5.6e-10 67.4 61 52.5
CANSAT01G2887 Cannabis sativa HOM05D007510 ORTHO05D009587 1.3e-09 66.2 71 45.1
CANSAT78G1864 Cannabis sativa HOM05D007510 ORTHO05D009587 1.3e-09 66.2 37 67.6
Cfa006928 Carpinus fangiana HOM05D007510 ORTHO05D009587 1.6e-09 65.9 55 49.1
Haze_03821 Corylus avellana HOM05D007510 ORTHO05D009587 1.6e-09 65.9 33 72.7
Potri.007G017200 Populus trichocarpa HOM05D007510 ORTHO05D009587 1.6e-09 65.9 75 49.3
Sc03g0003350 Simmondsia chinensis HOM05D007510 ORTHO05D009587 1.6e-09 65.9 59 52.5
HPP92_022284 Vanilla planifolia HOM05D007510 ORTHO05D009587 1.6e-09 65.9 59 50.8
HPP92_022401 Vanilla planifolia HOM05D007510 ORTHO05D009587 1.6e-09 65.9 59 50.8
Atru.chr3.749 Acer truncatum HOM05D007510 ORTHO05D009587 2.8e-09 65.1 31 77.4
Ca_22347_v3 Cicer arietinum L. HOM05D007510 ORTHO05D009587 2.8e-09 65.1 33 72.7
FvH4_1g12420 Fragaria vesca HOM05D000116 ORTHO05D000703 3.7e-09 64.7 62 51.6
Phvul.003G257700 Phaseolus vulgaris HOM05D007510 ORTHO05D009587 3.7e-09 64.7 33 72.7
QL06p034549 Quercus lobata HOM05D007510 ORTHO05D009587 3.7e-09 64.7 55 52.7
HPP92_028382 Vanilla planifolia HOM05D007510 ORTHO05D009587 3.7e-09 64.7 59 50.8
SGA_v2.0_scaffold280G46849 Striga asiatica HOM05D007510 ORTHO05D009587 4.8e-09 64.3 33 75.8
CDE04G3692 Ceratophyllum demersum HOM05D001179 ORTHO05D002194 6.2e-09 63.9 46 58.7
TWI09G1276 Tripterygium wilfordii HOM05D007510 ORTHO05D009587 6.2e-09 63.9 36 69.4
AagrBONN_evm.TU.Sc2ySwM_228.2268 Anthoceros agrestis HOM05D007510 ORTHO05D009587 1.1e-08 63.2 32 75.0
CARHR195940 Cardamine hirsuta HOM05D007510 ORTHO05D009587 1.1e-08 63.2 29 79.3
FAN26G1275 Fragaria x ananassa HOM05D007510 ORTHO05D009587 1.1e-08 63.2 66 48.5
Sed0019199 Sechium edule HOM05D007510 ORTHO05D009587 1.1e-08 63.2 65 44.6
SEGI_27269 Sequoiadendron giganteum HOM05D007510 ORTHO05D009587 5.3e-08 60.8 32 68.8
ATR0661G079 Amborella trichopoda HOM05D007510 ORTHO05D009587 6.9e-08 60.5 30 70.0
Zm00001eb319510 Zea mays HOM05D007510 ORTHO05D009587 6.9e-08 60.5 41 58.5
Aqoxy1G00866 Aquilegia oxysepala HOM05D007510 ORTHO05D009587 9.0e-08 60.1 29 75.9
AagrBONN_evm.TU.Sc2ySwM_368.2258 Anthoceros agrestis HOM05D007510 ORTHO05D009587 1.2e-07 59.7 68 41.2
CDE12G0095 Ceratophyllum demersum HOM05D007510 ORTHO05D009587 1.2e-07 59.7 30 73.3
Mapoly0025s0056 Marchantia polymorpha HOM05D007510 ORTHO05D009587 1.2e-07 59.7 44 50.0
Dinv40044 Davidia involucrata HOM05D007510 ORTHO05D009587 4.9e-06 54.3 38 55.3


User provided reference genes

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