Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI08440 Sapria himalayana HOM05D000129 ORTHO05D000997 3.0e-75 285.0 136 100.0
Prupe.1G421100 Prunus persica HOM05D000129 ORTHO05D000997 8.5e-14 80.9 81 53.1
CAN.G674.46 Capsicum annuum HOM05D000129 ORTHO05D000997 4.2e-13 78.6 81 50.6
Manes.18G047600 Manihot esculenta HOM05D000129 ORTHO05D000997 4.2e-13 78.6 81 51.9
Nitab4.5_0005086g0030 Nicotiana tabacum HOM05D000129 ORTHO05D000997 4.2e-13 78.6 81 50.6
Nitab4.5_0005915g0030 Nicotiana tabacum HOM05D000129 ORTHO05D000997 4.2e-13 78.6 81 50.6
CiPaw.07G173500 Carya illinoinensis HOM05D000129 ORTHO05D000997 7.2e-13 77.8 81 51.9
Potri.002G117400 Populus trichocarpa HOM05D000129 ORTHO05D000997 7.2e-13 77.8 81 50.6
Lalb_Chr23g0267561 Lupinus albus HOM05D000129 ORTHO05D000997 1.2e-12 77.0 81 49.4
Nn5g30632 Nelumbo nucifera HOM05D000129 ORTHO05D000997 1.2e-12 77.0 81 48.1
Cc10_g05070 Coffea canephora HOM05D000129 ORTHO05D000997 1.6e-12 76.6 81 49.4
Glyma.04G046700 Glycine max HOM05D000129 ORTHO05D000997 1.6e-12 76.6 81 50.6
Lj4C73G4 Lonicera japonica HOM05D000129 ORTHO05D000997 1.6e-12 76.6 81 50.6
Medtr3g103270 Medicago truncatula HOM05D000129 ORTHO05D000997 1.6e-12 76.6 81 50.6
Psat5g037880 Pisum sativum HOM05D000129 ORTHO05D000997 1.6e-12 76.6 81 50.6
Solyc07g022790.4 Solanum lycopersicum HOM05D000129 ORTHO05D000997 1.6e-12 76.6 81 49.4
Sopen07g012030 Solanum pennellii HOM05D000129 ORTHO05D000997 1.6e-12 76.6 81 49.4
TAR381G1656 Trochodendron aralioides HOM05D000129 ORTHO05D000997 1.6e-12 76.6 81 50.6
MD08G1080200 Malus domestica HOM05D000129 ORTHO05D000997 2.1e-12 76.3 81 50.6
MD15G1067300 Malus domestica HOM05D000129 ORTHO05D000997 2.1e-12 76.3 81 50.6
Phvul.009G072800 Phaseolus vulgaris HOM05D000129 ORTHO05D000997 2.1e-12 76.3 81 50.6
QL12p038296 Quercus lobata HOM05D000129 ORTHO05D000997 2.1e-12 76.3 81 49.4
vmacro22048 Vaccinium macrocarpon HOM05D000129 ORTHO05D000997 2.1e-12 76.3 81 50.6
VMungo1309G1806 Vigna mungo HOM05D000129 ORTHO05D000997 2.1e-12 76.3 81 50.6
Atru.chr13.850 Acer truncatum HOM05D000129 ORTHO05D000997 2.7e-12 75.9 81 50.6
Cpa.g.sc142.46 Carica papaya HOM05D000129 ORTHO05D000997 2.7e-12 75.9 81 51.9
Lj1g0005699 Lotus japonicus HOM05D000129 ORTHO05D000997 2.7e-12 75.9 81 50.6
Potri.014G014700 Populus trichocarpa HOM05D000129 ORTHO05D000997 2.7e-12 75.9 81 49.4
arahy.Tifrunner.gnm1.ann1.2ZDN53 Arachis hypogaea HOM05D000129 ORTHO05D000997 3.6e-12 75.5 81 50.6
arahy.Tifrunner.gnm1.ann1.NRZN5K Arachis hypogaea HOM05D000129 ORTHO05D000997 3.6e-12 75.5 81 50.6
DCAR_027593 Daucus carota HOM05D000129 ORTHO05D000997 3.6e-12 75.5 81 49.4
Eucgr.F02237 Eucalyptus grandis HOM05D000129 ORTHO05D000997 3.6e-12 75.5 81 50.6
CSS0014514 Camellia sinensis var. sinensis HOM05D000129 ORTHO05D000997 4.7e-12 75.1 81 50.6
Ca_15897_v3 Cicer arietinum L. HOM05D000129 ORTHO05D000997 4.7e-12 75.1 81 49.4
FvH4_2g32870 Fragaria vesca HOM05D000129 ORTHO05D000997 4.7e-12 75.1 81 48.1
FAN24G2434 Fragaria x ananassa HOM05D000129 ORTHO05D000997 4.7e-12 75.1 81 48.1
PSO541G1994 Papaver somniferum HOM05D000129 ORTHO05D000997 4.7e-12 75.1 81 50.6
PSO675G3743 Papaver somniferum HOM05D000129 ORTHO05D000997 4.7e-12 75.1 81 50.6
Rhsim07G0219200 Rhododendron simsii HOM05D000129 ORTHO05D000997 4.7e-12 75.1 81 49.4
Sabra14G0008800 Salix brachista HOM05D000129 ORTHO05D000997 4.7e-12 75.1 81 49.4
GSVIVG01009320001 Vitis vinifera HOM05D000129 ORTHO05D000997 4.7e-12 75.1 81 49.4
Aqoxy6G02557 Aquilegia oxysepala HOM05D000129 ORTHO05D000997 6.1e-12 74.7 81 49.4
SEGI_00929 Sequoiadendron giganteum HOM05D000129 ORTHO05D000997 6.1e-12 74.7 107 38.3
HPP92_020533 Vanilla planifolia HOM05D000129 ORTHO05D000997 6.1e-12 74.7 89 43.8
Lsat_1_v5_gn_9_76580 Lactuca sativa HOM05D000129 ORTHO05D000997 7.9e-12 74.3 81 46.9
RcHm_v2.0_Chr6g0309841 Rosa chinensis HOM05D000129 ORTHO05D000997 7.9e-12 74.3 81 48.1
Dinv44942 Davidia involucrata HOM05D000129 ORTHO05D000997 1.0e-11 73.9 81 49.4
Hma1.2p1_1170F.1_g263330 Hydrangea macrophylla HOM05D000129 ORTHO05D000997 1.0e-11 73.9 81 48.1
Hma1.2p1_1170F.1_g263340 Hydrangea macrophylla HOM05D000129 ORTHO05D000997 1.0e-11 73.9 81 48.1
ECA232G0094 Erigeron canadensis HOM05D000129 ORTHO05D000997 1.4e-11 73.6 81 48.1
HanXRQChr12g0368611 Helianthus annuus HOM05D000129 ORTHO05D000997 1.4e-11 73.6 81 46.9
Oeu053077.1 Olea europaea HOM05D000129 ORTHO05D000997 1.4e-11 73.6 81 46.9
AUR62036019 Chenopodium quinoa HOM05D000129 ORTHO05D000997 1.8e-11 73.2 81 48.1
CANSAT11G2151 Cannabis sativa HOM05D000129 ORTHO05D000997 2.3e-11 72.8 81 45.7
CDE01G0303 Ceratophyllum demersum HOM05D000129 ORTHO05D000997 2.3e-11 72.8 81 49.4
AUR62037950 Chenopodium quinoa HOM05D000129 ORTHO05D000997 2.3e-11 72.8 80 48.8
Gohir.A05G210900 Gossypium hirsutum HOM05D000129 ORTHO05D000997 2.3e-11 72.8 81 46.9
Gohir.D05G214200 Gossypium hirsutum HOM05D000129 ORTHO05D000997 2.3e-11 72.8 81 46.9
Gorai.009G220900 Gossypium raimondii HOM05D000129 ORTHO05D000997 2.3e-11 72.8 81 46.9
Hund02410 Selenicereus undatus HOM05D000129 ORTHO05D000997 2.3e-11 72.8 80 48.8
Sc15g0005610 Simmondsia chinensis HOM05D000129 ORTHO05D000997 2.3e-11 72.8 99 44.4
ATR0739G155 Amborella trichopoda HOM05D000129 ORTHO05D000997 3.0e-11 72.4 81 48.1
ClCG08G016600 Citrullus lanatus HOM05D000129 ORTHO05D000997 3.0e-11 72.4 81 46.9
PGR031G0208 Punica granatum HOM05D000129 ORTHO05D000997 3.0e-11 72.4 81 48.1
Sed0025438 Sechium edule HOM05D000129 ORTHO05D000997 3.0e-11 72.4 81 48.1
SEGI_16687 Sequoiadendron giganteum HOM05D000129 ORTHO05D000997 3.0e-11 72.4 81 44.4
EL10Ac8g19856 Beta vulgaris HOM05D000129 ORTHO05D000997 3.9e-11 72.0 81 46.9
Migut.N02792 Erythranthe guttata HOM05D000129 ORTHO05D000997 3.9e-11 72.0 81 44.4
SGA_v2.0_scaffold152G36819 Striga asiatica HOM05D000129 ORTHO05D000997 3.9e-11 72.0 81 44.4
COL.COLO4_28480 Corchorus olitorius HOM05D000129 ORTHO05D000997 5.1e-11 71.6 81 46.9
CsaV3_2G026010 Cucumis sativus L. HOM05D000129 ORTHO05D000997 5.1e-11 71.6 81 45.7
Aa31LG1G4760 Aethionema arabicum HOM05D000129 ORTHO05D000997 6.7e-11 71.2 84 45.2
FAN15G0647 Fragaria x ananassa HOM05D000129 ORTHO05D000997 6.7e-11 71.2 81 46.9
FAN27G3321 Fragaria x ananassa HOM05D000129 ORTHO05D000997 6.7e-11 71.2 81 46.9
SalBow2G1224 Salvia bowleyana HOM05D000129 ORTHO05D000997 6.7e-11 71.2 81 45.7
Sp1g08760 Schrenkiella parvula HOM05D000129 ORTHO05D000997 8.8e-11 70.9 99 42.4
AL1G20820 Arabidopsis lyrata HOM05D000129 ORTHO05D000997 1.1e-10 70.5 84 45.2
AT1G10130 Arabidopsis thaliana HOM05D000129 ORTHO05D000997 1.1e-10 70.5 84 45.2
BcaB08g37332 Brassica carinata HOM05D000129 ORTHO05D000997 1.1e-10 70.5 99 41.4
BcaC07g41841 Brassica carinata HOM05D000129 ORTHO05D000997 1.1e-10 70.5 99 41.4
A09p65190 Brassica napus HOM05D000129 ORTHO05D000997 1.1e-10 70.5 99 41.4
C08p49110 Brassica napus HOM05D000129 ORTHO05D000997 1.1e-10 70.5 99 41.4
BolC8t52446H Brassica oleracea HOM05D000129 ORTHO05D000997 1.1e-10 70.5 99 41.4
Carub.0001s0954 Capsella rubella HOM05D000129 ORTHO05D000997 1.1e-10 70.5 84 45.2
Duzib093G1703 Durio zibethinus HOM05D000129 ORTHO05D000997 1.1e-10 70.5 81 45.7
Thhalv10006682m.g Eutrema salsugineum HOM05D000129 ORTHO05D000997 1.1e-10 70.5 84 45.2
BraA09t41862Z Brassica rapa HOM05D000129 ORTHO05D000997 1.5e-10 70.1 84 44.0
Ciclev10000142m.g Citrus clementina HOM05D000129 ORTHO05D000997 1.5e-10 70.1 81 45.7
THA.LOC104816765 Tarenaya hassleriana HOM05D000129 ORTHO05D000997 1.5e-10 70.1 84 42.9
BcaC05g24810 Brassica carinata HOM05D000129 ORTHO05D000997 2.6e-10 69.3 99 41.4
A06p06780 Brassica napus HOM05D000129 ORTHO05D000997 2.6e-10 69.3 99 41.4
C05p08260 Brassica napus HOM05D000129 ORTHO05D000997 2.6e-10 69.3 99 41.4
BolC5t29577H Brassica oleracea HOM05D000129 ORTHO05D000997 2.6e-10 69.3 99 41.4
BraA06t23893Z Brassica rapa HOM05D000129 ORTHO05D000997 2.6e-10 69.3 99 41.4
Ah.11g039370 Amaranthus hybridus HOM05D000129 ORTHO05D000997 7.4e-10 67.8 81 44.4
Thecc.08G086700 Theobroma cacao HOM05D000129 ORTHO05D000997 7.4e-10 67.8 81 45.7
Actinidia19583 Actinidia chinensis HOM05D000129 ORTHO05D000997 1.7e-09 66.6 75 48.0
AagrBONN_evm.TU.Sc2ySwM_344.3348 Anthoceros agrestis HOM05D000129 ORTHO05D000997 2.2e-09 66.2 107 36.4
SMO268G0052 Selaginella moellendorffii HOM05D000129 ORTHO05D000997 6.3e-09 64.7 107 36.4
Haze_22417 Corylus avellana HOM05D000129 ORTHO05D000997 4.1e-08 62.0 30 86.7
Pp3c11_7920 Physcomitrium patens HOM05D000129 ORTHO05D000997 4.1e-08 62.0 107 32.7
Mapoly0044s0031 Marchantia polymorpha HOM05D000129 ORTHO05D000997 2.0e-07 59.7 91 34.1


User provided reference genes

Program Settings