Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI08359 Sapria himalayana HOM05D008681 ORTHO05D000037 1.2e-20 102.1 47 100.0
SHI12916 Sapria himalayana HOM05D008681 ORTHO05D000037 5.5e-13 76.6 45 77.8
SHI23572 Sapria himalayana HOM05D008681 ORTHO05D000037 2.1e-12 74.7 43 76.7
SHI29187 Sapria himalayana HOM05D000034 ORTHO05D000037 1.0e-11 72.4 46 67.4
SHI09403 Sapria himalayana HOM05D000034 ORTHO05D000037 3.0e-11 70.9 39 79.5
SHI08819 Sapria himalayana HOM05D008681 ORTHO05D000037 5.2e-11 70.1 43 72.1
SHI10579 Sapria himalayana HOM05D000034 ORTHO05D000037 5.2e-11 70.1 39 76.9
SHI20142 Sapria himalayana HOM05D000034 ORTHO05D000037 1.2e-10 68.9 39 69.2
SHI04621 Sapria himalayana HOM05D008681 ORTHO05D000037 2.6e-10 67.8 45 66.7
SHI11206 Sapria himalayana HOM05D000034 ORTHO05D000037 2.6e-10 67.8 39 76.9
Nn7g38140 Nelumbo nucifera HOM05D000034 ORTHO05D000037 3.4e-10 67.4 39 74.4
SHI22076 Sapria himalayana HOM05D000034 ORTHO05D000037 3.4e-10 67.4 47 66.0
SHI03909 Sapria himalayana HOM05D000034 ORTHO05D000037 5.7e-10 66.6 39 69.2
SHI00882 Sapria himalayana HOM05D000034 ORTHO05D000037 7.5e-10 66.2 34 82.4
Rhsim06G0160000 Rhododendron simsii HOM05D000034 ORTHO05D000285 1.7e-09 65.1 39 69.2
Rhsim05G0142800 Rhododendron simsii HOM05D000034 ORTHO05D000037 2.2e-09 64.7 39 69.2
Rhsim08G0056200 Rhododendron simsii HOM05D000034 ORTHO05D000037 2.2e-09 64.7 39 69.2
SHI20928 Sapria himalayana HOM05D000034 ORTHO05D000037 2.8e-09 64.3 39 71.8
SHI06118 Sapria himalayana HOM05D000034 ORTHO05D000037 4.8e-09 63.5 36 72.2
HanXRQChr03g0077651 Helianthus annuus HOM05D000034 ORTHO05D000037 1.4e-08 62.0 39 69.2
Rhsim04G0111300 Rhododendron simsii HOM05D000034 ORTHO05D000037 1.4e-08 62.0 37 70.3
Rhsim04G0145700 Rhododendron simsii HOM05D000034 ORTHO05D000037 1.4e-08 62.0 37 70.3
Rhsim05G0210200 Rhododendron simsii HOM05D000034 ORTHO05D000037 1.4e-08 62.0 37 70.3
SHI20365 Sapria himalayana HOM05D000034 ORTHO05D000037 1.4e-08 62.0 39 76.9
SHI25914 Sapria himalayana HOM05D000034 ORTHO05D000037 1.8e-08 61.6 34 79.4
Rhsim04G0146200 Rhododendron simsii HOM05D000034 ORTHO05D000037 3.1e-08 60.8 39 66.7
SHI22744 Sapria himalayana HOM05D000034 ORTHO05D000037 5.4e-08 60.1 36 69.4
SHI06119 Sapria himalayana HOM05D000034 ORTHO05D000037 7.0e-08 59.7 39 66.7
SHI19427 Sapria himalayana HOM05D000034 ORTHO05D000037 2.0e-07 58.2 38 68.4
HanXRQChr12g0382961 Helianthus annuus HOM05D000034 ORTHO05D000037 4.5e-07 57.0 39 59.0
Rhsim01G0195900 Rhododendron simsii HOM05D000084 ORTHO05D002966 5.9e-07 56.6 32 71.9
ECA238G2489 Erigeron canadensis HOM05D000034 ORTHO05D000037 1.0e-06 55.8 39 56.4
PSO832G2050 Papaver somniferum HOM05D000034 ORTHO05D000037 1.0e-06 55.8 46 52.2
PSO700G0240 Papaver somniferum HOM05D000034 ORTHO05D000037 1.3e-06 55.5 46 50.0
PSO063G6922 Papaver somniferum HOM05D000034 ORTHO05D000037 2.2e-06 54.7 46 50.0
PSO210G4967 Papaver somniferum HOM05D000034 ORTHO05D000037 2.2e-06 54.7 46 50.0
SHI23384 Sapria himalayana HOM05D000034 ORTHO05D000037 2.2e-06 54.7 39 66.7
CAN.G108.64 Capsicum annuum HOM05D000034 ORTHO05D000037 2.9e-06 54.3 34 58.8
HanXRQChr10g0279481 Helianthus annuus HOM05D000034 ORTHO05D000285 2.9e-06 54.3 39 56.4
HanXRQChr11g0331041 Helianthus annuus HOM05D000034 ORTHO05D000037 2.9e-06 54.3 41 56.1
HanXRQChr12g0372731 Helianthus annuus HOM05D000034 ORTHO05D000037 2.9e-06 54.3 39 53.8
Rhsim09G0068200 Rhododendron simsii HOM05D000034 ORTHO05D000037 2.9e-06 54.3 33 66.7
Atru.chr10.1596 Acer truncatum HOM05D000034 ORTHO05D000037 3.8e-06 53.9 46 52.2
HanXRQChr07g0185941 Helianthus annuus HOM05D000034 ORTHO05D000037 3.8e-06 53.9 39 56.4
SHI29017 Sapria himalayana HOM05D008681 ORTHO05D012248 3.8e-06 53.9 36 66.7
SHI29028 Sapria himalayana HOM05D008681 ORTHO05D012248 3.8e-06 53.9 36 66.7
ECA232G1773 Erigeron canadensis HOM05D000034 ORTHO05D000037 5.0e-06 53.5 39 53.8
ECA233G5785 Erigeron canadensis HOM05D001746 ORTHO05D001823 5.0e-06 53.5 40 62.5
PSO017G6287 Papaver somniferum HOM05D000034 ORTHO05D000037 5.0e-06 53.5 46 47.8
PSO170G2012 Papaver somniferum HOM05D000034 ORTHO05D000037 5.0e-06 53.5 46 47.8
PSO675G0791 Papaver somniferum HOM05D000034 ORTHO05D000037 5.0e-06 53.5 46 47.8
PSO675G4335 Papaver somniferum HOM05D000034 ORTHO05D000037 5.0e-06 53.5 46 47.8
SHI20645 Sapria himalayana HOM05D008681 ORTHO05D000037 5.0e-06 53.5 36 72.2
TWI75G1126 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 6.5e-06 53.1 46 52.2
Aqoxy1G02789 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 8.5e-06 52.8 39 51.3
Aqoxy1G03317 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 8.5e-06 52.8 34 64.7
Aqoxy2G01242 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 8.5e-06 52.8 39 51.3


User provided reference genes

Program Settings