Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI08298 Sapria himalayana HOM05D004348 ORTHO05D006191 6.8e-148 527.3 272 100.0
THA.LOC104806947 Tarenaya hassleriana HOM05D004348 ORTHO05D006191 2.1e-72 276.6 151 85.4
Actinidia15256 Actinidia chinensis HOM05D004348 ORTHO05D006191 4.7e-72 275.4 151 84.1
CARHR242470 Cardamine hirsuta HOM05D004348 ORTHO05D006191 1.8e-71 273.5 151 82.8
Potri.014G034100 Populus trichocarpa HOM05D004348 ORTHO05D006191 5.2e-71 271.9 151 83.4
Sabra14G0024200 Salix brachista HOM05D004348 ORTHO05D006191 5.2e-71 271.9 179 72.1
AL7G16960 Arabidopsis lyrata HOM05D004348 ORTHO05D006191 6.8e-71 271.6 151 82.8
AT4G34310 Arabidopsis thaliana HOM05D004348 ORTHO05D006191 6.8e-71 271.6 151 82.8
Cpa.g.c24415.13 Carica papaya HOM05D004348 ORTHO05D006191 6.8e-71 271.6 151 84.1
RcHm_v2.0_Chr6g0307221 Rosa chinensis HOM05D004348 ORTHO05D006191 8.8e-71 271.2 151 83.4
Dinv35980 Davidia involucrata HOM05D004348 ORTHO05D006191 1.2e-70 270.8 152 84.2
Prupe.1G440200 Prunus persica HOM05D004348 ORTHO05D006191 1.2e-70 270.8 151 82.8
Thhalv10024246m.g Eutrema salsugineum HOM05D004348 ORTHO05D006191 1.5e-70 270.4 151 82.1
CANSAT78G0057 Cannabis sativa HOM05D004348 ORTHO05D006191 2.6e-70 269.6 151 83.4
Sp7g32110 Schrenkiella parvula HOM05D004348 ORTHO05D006191 2.6e-70 269.6 151 82.1
A01p04110 Brassica napus HOM05D004348 ORTHO05D006191 3.4e-70 269.2 151 81.5
C01p04470 Brassica napus HOM05D004348 ORTHO05D006191 3.4e-70 269.2 151 81.5
BolC1t00433H Brassica oleracea HOM05D004348 ORTHO05D006191 3.4e-70 269.2 151 81.5
BraA01t00399Z Brassica rapa HOM05D004348 ORTHO05D006191 3.4e-70 269.2 151 81.5
Carub.0007s0605 Capsella rubella HOM05D004348 ORTHO05D006191 3.4e-70 269.2 151 80.8
Cfa018516 Carpinus fangiana HOM05D004348 ORTHO05D006191 4.4e-70 268.9 151 82.8
QL02p005708 Quercus lobata HOM05D004348 ORTHO05D006191 4.4e-70 268.9 151 82.8
CiPaw.16G046500 Carya illinoinensis HOM05D004348 ORTHO05D006191 7.5e-70 268.1 151 83.4
MD15G1086600 Malus domestica HOM05D004348 ORTHO05D006191 7.5e-70 268.1 151 82.1
Atru.chr13.637 Acer truncatum HOM05D004348 ORTHO05D006191 9.8e-70 267.7 151 82.8
ClCG05G019730 Citrullus lanatus HOM05D004348 ORTHO05D006191 9.8e-70 267.7 151 82.1
Lj4A53T53 Lonicera japonica HOM05D004348 ORTHO05D006191 9.8e-70 267.7 151 83.4
Phvul.001G020000 Phaseolus vulgaris HOM05D004348 ORTHO05D006191 9.8e-70 267.7 151 83.4
CsaV3_4G034150 Cucumis sativus L. HOM05D004348 ORTHO05D006191 1.3e-69 267.3 151 82.1
Sed0015301 Sechium edule HOM05D004348 ORTHO05D006191 1.3e-69 267.3 151 82.8
CSS0012651 Camellia sinensis var. sinensis HOM05D004348 ORTHO05D006191 1.7e-69 266.9 151 83.4
Gohir.D01G106800 Gossypium hirsutum HOM05D004348 ORTHO05D006191 1.7e-69 266.9 151 82.1
Atru.chr1.1668 Acer truncatum HOM05D004348 ORTHO05D006191 2.2e-69 266.5 151 82.1
COL.COLO4_26463 Corchorus olitorius HOM05D004348 ORTHO05D006191 2.2e-69 266.5 150 82.7
Hma1.2p1_0337F.1_g129300 Hydrangea macrophylla HOM05D004348 ORTHO05D006191 2.2e-69 266.5 151 82.1
Medtr1g019960 Medicago truncatula HOM05D004348 ORTHO05D006191 2.2e-69 266.5 151 82.8
AUR62022445 Chenopodium quinoa HOM05D004348 ORTHO05D006191 2.8e-69 266.2 151 80.8
AUR62039313 Chenopodium quinoa HOM05D004348 ORTHO05D006191 2.8e-69 266.2 151 80.8
Aqoxy5G01277 Aquilegia oxysepala HOM05D004348 ORTHO05D006191 3.7e-69 265.8 151 83.4
Gohir.A01G118500 Gossypium hirsutum HOM05D004348 ORTHO05D006191 3.7e-69 265.8 151 81.5
Lalb_Chr24g0399211 Lupinus albus HOM05D004348 ORTHO05D006191 3.7e-69 265.8 151 81.5
Manes.05G171200 Manihot esculenta HOM05D004348 ORTHO05D006191 3.7e-69 265.8 151 83.4
Psat6g012000 Pisum sativum HOM05D004348 ORTHO05D006191 4.9e-69 265.4 151 82.8
FvH4_2g34840 Fragaria vesca HOM05D004348 ORTHO05D006191 6.3e-69 265.0 151 81.5
FAN27G3414 Fragaria x ananassa HOM05D004348 ORTHO05D006191 6.3e-69 265.0 151 81.5
TAR625G1112 Trochodendron aralioides HOM05D004348 ORTHO05D006191 6.3e-69 265.0 151 82.1
Gorai.002G131100 Gossypium raimondii HOM05D004348 ORTHO05D006191 1.1e-68 264.2 151 80.8
MD08G1105600 Malus domestica HOM05D004348 ORTHO05D006191 1.1e-68 264.2 151 80.8
PGR031G2748 Punica granatum HOM05D004348 ORTHO05D006191 1.1e-68 264.2 151 82.1
Eucgr.F02367 Eucalyptus grandis HOM05D004348 ORTHO05D006191 1.8e-68 263.5 151 81.5
Nn5g30212 Nelumbo nucifera HOM05D004348 ORTHO05D006191 1.8e-68 263.5 151 80.8
arahy.Tifrunner.gnm1.ann1.2EEB7P Arachis hypogaea HOM05D004348 ORTHO05D006191 2.4e-68 263.1 151 82.1
arahy.Tifrunner.gnm1.ann1.3D95JG Arachis hypogaea HOM05D004348 ORTHO05D006191 2.4e-68 263.1 151 82.1
FAN15G1136 Fragaria x ananassa HOM05D004348 ORTHO05D006191 2.4e-68 263.1 150 81.3
Sc02g0006980 Simmondsia chinensis HOM05D004348 ORTHO05D006191 3.1e-68 262.7 151 79.5
Ciclev10000175m.g Citrus clementina HOM05D004348 ORTHO05D006191 4.1e-68 262.3 151 80.1
EL10Ac1g01783 Beta vulgaris HOM05D004348 ORTHO05D006191 5.4e-68 261.9 151 78.8
Migut.N02696 Erythranthe guttata HOM05D004348 ORTHO05D006191 5.4e-68 261.9 151 81.5
Nitab4.5_0000068g0550 Nicotiana tabacum HOM05D004348 ORTHO05D006191 7.0e-68 261.5 151 80.1
Rhsim06G0047100 Rhododendron simsii HOM05D004348 ORTHO05D006191 9.2e-68 261.2 151 81.5
Lj5g0025546 Lotus japonicus HOM05D004348 ORTHO05D006191 1.2e-67 260.8 151 81.5
ECA247G1923 Erigeron canadensis HOM05D004348 ORTHO05D006191 2.7e-67 259.6 151 81.5
GSVIVG01009553001 Vitis vinifera HOM05D004348 ORTHO05D006191 3.5e-67 259.2 150 81.3
VMungo0647G0261 Vigna mungo HOM05D004348 ORTHO05D006191 4.5e-67 258.8 151 81.5
Lsat_1_v5_gn_4_124060 Lactuca sativa HOM05D004348 ORTHO05D006191 5.9e-67 258.5 151 78.8
PSO675G6987 Papaver somniferum HOM05D004348 ORTHO05D006191 7.7e-67 258.1 166 72.9
vmacro21553 Vaccinium macrocarpon HOM05D004348 ORTHO05D006191 7.7e-67 258.1 151 80.1
Solyc04g079280.4 Solanum lycopersicum HOM05D004348 ORTHO05D006191 1.0e-66 257.7 151 78.8
Sopen04g032870 Solanum pennellii HOM05D004348 ORTHO05D006191 1.0e-66 257.7 151 78.8
PGSC0003DMG400007988 Solanum tuberosum HOM05D004348 ORTHO05D006191 1.3e-66 257.3 151 78.8
Duzib093G0393 Durio zibethinus HOM05D004348 ORTHO05D006191 1.7e-66 256.9 151 80.1
HanXRQChr02g0038751 Helianthus annuus HOM05D004348 ORTHO05D006191 1.7e-66 256.9 151 81.5
Sed0012719 Sechium edule HOM05D004348 ORTHO05D006191 2.9e-66 256.1 151 78.8
DCAR_020931 Daucus carota HOM05D004348 ORTHO05D006191 6.6e-66 255.0 151 78.1
CAN.G371.44 Capsicum annuum HOM05D004348 ORTHO05D006191 8.6e-66 254.6 151 77.5
SEGI_07910 Sequoiadendron giganteum HOM05D004348 ORTHO05D006191 8.6e-66 254.6 151 81.5
HanXRQChr16g0507461 Helianthus annuus HOM05D004348 ORTHO05D006191 2.5e-65 253.1 151 77.5
Os03g0185500 Oryza sativa ssp. japonica HOM05D004348 ORTHO05D006191 4.3e-65 252.3 169 72.2
ECA232G4920 Erigeron canadensis HOM05D004348 ORTHO05D006191 5.6e-65 251.9 151 77.5
Oeu057258.1 Olea europaea HOM05D004348 ORTHO05D006191 5.6e-65 251.9 158 76.6
Cc10_g04460 Coffea canephora HOM05D004348 ORTHO05D006191 9.5e-65 251.1 150 79.3
CDE10G0798 Ceratophyllum demersum HOM05D004348 ORTHO05D006191 1.2e-64 250.8 151 76.8
unitig_26.g10060 Utricularia gibba HOM05D004348 ORTHO05D006191 1.2e-64 250.8 151 78.1
ATR1159G040 Amborella trichopoda HOM05D004348 ORTHO05D006191 2.1e-64 250.0 151 78.8
Peaxi162Scf00528g00825 Petunia axillaris HOM05D004348 ORTHO05D006191 6.1e-64 248.4 151 77.5
MELO3C016737.2 Cucumis melo HOM05D004348 ORTHO05D006191 8.0e-64 248.1 151 78.1
Oeu003300.1 Olea europaea HOM05D004348 ORTHO05D006191 3.0e-63 246.1 167 71.9
CDE10G0919 Ceratophyllum demersum HOM05D004348 ORTHO05D006191 4.0e-63 245.7 151 76.2
Thecc.08G012500 Theobroma cacao HOM05D004348 ORTHO05D006191 5.7e-62 241.9 151 76.2
Mapoly0033s0109 Marchantia polymorpha HOM05D004348 ORTHO05D006191 1.3e-61 240.7 155 75.5
CiPaw.16G046800 Carya illinoinensis HOM05D004348 ORTHO05D006191 8.3e-61 238.0 145 78.6
SMO144G0009 Selaginella moellendorffii HOM05D004348 ORTHO05D006191 1.1e-60 237.7 152 75.0
AagrBONN_evm.TU.Sc2ySwM_344.1636 Anthoceros agrestis HOM05D004348 ORTHO05D006191 6.6e-58 228.4 152 73.7
SGA_v2.0_scaffold226G43137 Striga asiatica HOM05D004348 ORTHO05D006191 2.1e-56 223.4 153 71.2
Hund26625 Selenicereus undatus HOM05D004348 ORTHO05D006191 4.7e-56 222.2 124 81.5
Pp3c17_5660 Physcomitrium patens HOM05D004348 ORTHO05D006191 1.8e-55 220.3 156 68.6
MD08G1105800 Malus domestica HOM05D004348 ORTHO05D006191 6.8e-55 218.4 124 79.8
Haze_17559 Corylus avellana HOM05D004348 ORTHO05D006191 4.4e-54 215.7 132 77.3
HPP92_028299 Vanilla planifolia HOM05D004348 ORTHO05D006191 3.2e-52 209.5 123 78.0
CBR_g45541 Chara braunii HOM05D004348 ORTHO05D006191 4.6e-51 205.7 154 63.0
Glyma.14G081100 Glycine max HOM05D004348 ORTHO05D006191 1.9e-49 200.3 117 81.2
Aa31LG2G16180 Aethionema arabicum HOM05D004348 ORTHO05D006191 3.6e-48 196.1 120 77.5
Haze_18739 Corylus avellana HOM05D004348 ORTHO05D006191 1.3e-45 187.6 175 57.7
Ca_13305_v3 Cicer arietinum L. HOM05D004348 ORTHO05D006191 1.4e-44 184.1 150 62.7
Lsat_1_v5_gn_1_20621 Lactuca sativa HOM05D004348 ORTHO05D006191 1.4e-44 184.1 96 85.4
Zm00001eb006390 Zea mays HOM05D004348 ORTHO05D006191 1.6e-40 170.6 169 56.2
TPR.G13698 Trifolium pratense HOM05D004348 ORTHO05D006191 1.0e-34 151.4 84 84.5
Glyma.17G244300 Glycine max HOM05D004348 ORTHO05D006191 8.6e-34 148.3 84 81.0
MSTRG.22274 Avicennia marina HOM05D004348 ORTHO05D006191 2.6e-30 136.7 89 70.8
HPP92_019296 Vanilla planifolia HOM05D004348 ORTHO05D006191 6.4e-29 132.1 77 79.2
TPR.G40548 Trifolium pratense HOM05D004348 ORTHO05D006191 4.3e-25 119.4 68 80.9
PRCOL_00001182 Prasinoderma coloniale HOM05D004348 ORTHO05D006191 5.4e-20 102.4 177 37.3
Cre16.g686501 Chlamydomonas reinhardtii HOM05D004348 ORTHO05D006191 3.5e-19 99.8 159 40.9
SGA_v2.0_scaffold6G03459 Striga asiatica HOM05D004348 ORTHO05D006191 2.9e-13 80.1 46 73.9
HPP92_019297 Vanilla planifolia HOM05D004348 ORTHO05D006191 2.9e-13 80.1 62 61.3
Lsat_1_v5_gn_8_33681 Lactuca sativa HOM05D004348 ORTHO05D006191 1.1e-12 78.2 58 69.0
Lsat_1_v5_gn_5_11760 Lactuca sativa HOM05D004348 ORTHO05D006191 1.9e-12 77.4 55 70.9
SGA_v2.0_scaffold162G37946 Striga asiatica HOM05D004348 ORTHO05D006191 1.5e-09 67.8 38 76.3
Mapoly0200s0002 Marchantia polymorpha HOM05D004348 ORTHO05D000239 1.3e-08 64.7 137 32.8
Mapoly0064s0093 Marchantia polymorpha HOM05D004348 ORTHO05D000239 3.7e-08 63.2 159 30.8
Mapoly2546s0001 Marchantia polymorpha HOM05D004348 ORTHO05D000239 3.7e-08 63.2 137 32.1
Mapoly0031s0035 Marchantia polymorpha HOM05D004348 ORTHO05D000239 6.9e-07 58.9 163 29.4
Mapoly0120s0019 Marchantia polymorpha HOM05D004348 ORTHO05D000239 9.0e-07 58.5 153 28.1
Mapoly0637s0001 Marchantia polymorpha HOM05D004348 ORTHO05D000239 1.5e-06 57.8 135 28.1
Mapoly0049s0015 Marchantia polymorpha HOM05D004348 ORTHO05D000239 2.0e-06 57.4 165 29.1
Lsat_1_v5_gn_9_17240 Lactuca sativa HOM05D004348 ORTHO05D006191 5.8e-06 55.8 61 50.8
Mapoly0200s0001 Marchantia polymorpha HOM05D004348 ORTHO05D000239 5.8e-06 55.8 128 28.1


User provided reference genes

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