Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI08140 Sapria himalayana HOM05D003425 ORTHO05D003897 2.7e-42 174.9 84 100.0
Ciclev10001170m.g Citrus clementina HOM05D003425 ORTHO05D003897 4.7e-07 57.8 33 72.7
GSVIVG01009755001 Vitis vinifera HOM05D003425 ORTHO05D003897 6.2e-07 57.4 33 75.8
PSO541G3967 Papaver somniferum HOM05D003425 ORTHO05D003897 8.1e-07 57.0 37 64.9
PSO675G3885 Papaver somniferum HOM05D003425 ORTHO05D003897 8.1e-07 57.0 37 64.9
Rhsim07G0021400 Rhododendron simsii HOM05D003425 ORTHO05D003897 8.1e-07 57.0 33 72.7
Sed0018986 Sechium edule HOM05D003425 ORTHO05D003897 1.1e-06 56.6 35 71.4
Hma1.2p1_0775F.1_g216480 Hydrangea macrophylla HOM05D003425 ORTHO05D003897 1.4e-06 56.2 33 69.7
Manes.05G156100 Manihot esculenta HOM05D003425 ORTHO05D003897 1.4e-06 56.2 33 69.7
CsaV3_3G045400 Cucumis sativus L. HOM05D003425 ORTHO05D003897 2.4e-06 55.5 32 71.9
BcaB03g11898 Brassica carinata HOM05D003425 ORTHO05D003897 3.1e-06 55.1 78 39.7
Duzib093G1530 Durio zibethinus HOM05D003425 ORTHO05D003897 3.1e-06 55.1 33 69.7
Gohir.A06G008100 Gossypium hirsutum HOM05D003425 ORTHO05D003897 3.1e-06 55.1 33 69.7
Gohir.D06G003800 Gossypium hirsutum HOM05D003425 ORTHO05D003897 3.1e-06 55.1 33 69.7
Gorai.010G008400 Gossypium raimondii HOM05D003425 ORTHO05D003897 3.1e-06 55.1 33 69.7
Manes.18G020000 Manihot esculenta HOM05D003425 ORTHO05D003897 3.1e-06 55.1 32 71.9
AUR62014493 Chenopodium quinoa HOM05D003425 ORTHO05D003897 4.0e-06 54.7 32 71.9
AUR62044165 Chenopodium quinoa HOM05D003425 ORTHO05D003897 4.0e-06 54.7 32 71.9
TAR625G0421 Trochodendron aralioides HOM05D003425 ORTHO05D003897 4.0e-06 54.7 33 69.7
Aa31LG7G6080 Aethionema arabicum HOM05D003425 ORTHO05D003897 5.2e-06 54.3 31 71.0
CSS0020037 Camellia sinensis var. sinensis HOM05D003425 ORTHO05D003897 5.2e-06 54.3 33 69.7
Cpa.g.sc99.35 Carica papaya HOM05D003425 ORTHO05D003897 5.2e-06 54.3 31 71.0
Cfa013863 Carpinus fangiana HOM05D003425 ORTHO05D003897 5.2e-06 54.3 33 69.7
Dinv36112 Davidia involucrata HOM05D003425 ORTHO05D003897 5.2e-06 54.3 57 49.1
Nn5g29685 Nelumbo nucifera HOM05D003425 ORTHO05D003897 5.2e-06 54.3 35 62.9
ECA246G1007 Erigeron canadensis HOM05D003425 ORTHO05D003897 6.9e-06 53.9 33 63.6
FAN20G1443 Fragaria x ananassa HOM05D003425 ORTHO05D003897 6.9e-06 53.9 33 66.7
FAN27G0002 Fragaria x ananassa HOM05D003425 ORTHO05D003897 6.9e-06 53.9 33 66.7
Glyma.14G072200 Glycine max HOM05D003425 ORTHO05D003897 6.9e-06 53.9 31 71.0
MD15G1023500 Malus domestica HOM05D003425 ORTHO05D003897 6.9e-06 53.9 33 66.7
Rhsim13G0057300 Rhododendron simsii HOM05D003425 ORTHO05D003897 6.9e-06 53.9 43 55.8
VMungo0647G2373 Vigna mungo HOM05D003425 ORTHO05D003897 6.9e-06 53.9 31 71.0
AL1G35540 Arabidopsis lyrata HOM05D003425 ORTHO05D003897 9.0e-06 53.5 33 66.7
Carub.0001s2165 Capsella rubella HOM05D003425 ORTHO05D003897 9.0e-06 53.5 33 66.7
Carub.0002s0599 Capsella rubella HOM05D003425 ORTHO05D003897 9.0e-06 53.5 33 66.7
CARHR022450 Cardamine hirsuta HOM05D003425 ORTHO05D003897 9.0e-06 53.5 33 66.7
Eucgr.F01873 Eucalyptus grandis HOM05D003425 ORTHO05D003897 9.0e-06 53.5 31 67.7
Lalb_Chr23g0266531 Lupinus albus HOM05D003425 ORTHO05D003897 9.0e-06 53.5 33 72.7
Potri.005G230200 Populus trichocarpa HOM05D003425 ORTHO05D003897 9.0e-06 53.5 33 63.6
Sp1g19600 Schrenkiella parvula HOM05D003425 ORTHO05D003897 9.0e-06 53.5 33 66.7
Thecc.08G031800 Theobroma cacao HOM05D003425 ORTHO05D003897 9.0e-06 53.5 33 66.7


User provided reference genes

Program Settings