Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI08021 Sapria himalayana HOM05D003173 ORTHO05D003546 9.7e-118 426.8 210 100.0
SHI05037 Sapria himalayana HOM05D003173 ORTHO05D003546 3.5e-115 418.3 210 98.1
SHI13075 Sapria himalayana HOM05D003173 ORTHO05D003546 1.7e-114 416.0 210 97.6
SHI27843 Sapria himalayana HOM05D003173 ORTHO05D003546 1.1e-89 333.6 171 95.9
Manes.18G009300 Manihot esculenta HOM05D003173 ORTHO05D003546 1.9e-28 130.2 234 41.0
Duzib093G0730 Durio zibethinus HOM05D003173 ORTHO05D003546 3.0e-26 122.9 215 40.9
Thecc.08G051800 Theobroma cacao HOM05D003173 ORTHO05D003546 1.9e-25 120.2 213 38.0
Gohir.A05G182800 Gossypium hirsutum HOM05D003173 ORTHO05D003546 1.6e-24 117.1 219 40.2
COL.COLO4_26083 Corchorus olitorius HOM05D003173 ORTHO05D003546 4.8e-24 115.5 214 37.9
Duzib116G0616 Durio zibethinus HOM05D003173 ORTHO05D003546 4.8e-24 115.5 219 36.5
Gorai.009G191200 Gossypium raimondii HOM05D003173 ORTHO05D003546 1.1e-23 114.4 219 39.3
TAR628G1607 Trochodendron aralioides HOM05D003173 ORTHO05D003546 1.1e-23 114.4 215 39.1
TAR376G0945 Trochodendron aralioides HOM05D003173 ORTHO05D003546 1.8e-23 113.6 215 36.7
Potri.002G016500 Populus trichocarpa HOM05D003173 ORTHO05D003546 2.4e-23 113.2 223 38.1
Manes.05G142500 Manihot esculenta HOM05D003173 ORTHO05D003546 5.3e-23 112.1 214 37.4
CiPaw.07G143600 Carya illinoinensis HOM05D003173 ORTHO05D003546 9.0e-23 111.3 225 36.9
TWI12G1263 Tripterygium wilfordii HOM05D003173 ORTHO05D003546 1.0e-21 107.8 217 39.2
Potri.005G245600 Populus trichocarpa HOM05D003173 ORTHO05D003546 2.2e-21 106.7 210 37.6
Prupe.1G359400 Prunus persica HOM05D003173 ORTHO05D003546 8.5e-21 104.8 229 37.6
Psat6g001080 Pisum sativum HOM05D003173 ORTHO05D003546 1.1e-20 104.4 224 35.3
Actinidia15462 Actinidia chinensis HOM05D003173 ORTHO05D003546 1.4e-20 104.0 204 36.3
Dinv39556 Davidia involucrata HOM05D003173 ORTHO05D003546 1.9e-20 103.6 193 39.4
Aqoxy6G01958 Aquilegia oxysepala HOM05D003173 ORTHO05D003546 2.5e-20 103.2 218 37.2
Sabra05G0189700 Salix brachista HOM05D003173 ORTHO05D003546 2.5e-20 103.2 222 36.9
Sabra02G0013200 Salix brachista HOM05D003173 ORTHO05D003546 5.5e-20 102.1 220 36.4
TWI56G0288 Tripterygium wilfordii HOM05D003173 ORTHO05D003546 5.5e-20 102.1 219 38.4
Ciclev10002153m.g Citrus clementina HOM05D003173 ORTHO05D003546 7.2e-20 101.7 242 33.9
Cfa014008 Carpinus fangiana HOM05D003173 ORTHO05D003546 2.1e-19 100.1 231 38.5
QL02p012938 Quercus lobata HOM05D003173 ORTHO05D003546 2.7e-19 99.8 242 33.1
MSTRG.24229 Avicennia marina HOM05D003173 ORTHO05D003546 6.1e-19 98.6 227 35.2
Cpa.g.sc26.264 Carica papaya HOM05D003173 ORTHO05D003546 6.1e-19 98.6 216 36.6
Gohir.D05G185800 Gossypium hirsutum HOM05D003173 ORTHO05D003546 7.9e-19 98.2 219 36.1
Gohir.A05G255800 Gossypium hirsutum HOM05D003173 ORTHO05D003546 1.8e-18 97.1 219 33.8
CSS0006148 Camellia sinensis var. sinensis HOM05D003173 ORTHO05D003546 3.0e-18 96.3 218 35.8
Phvul.001G002200 Phaseolus vulgaris HOM05D003173 ORTHO05D003546 3.0e-18 96.3 221 33.9
Haze_22703 Corylus avellana HOM05D003173 ORTHO05D003546 5.1e-18 95.5 234 36.3
Migut.N03186 Erythranthe guttata HOM05D003173 ORTHO05D003546 5.1e-18 95.5 231 34.2
Gorai.009G268900 Gossypium raimondii HOM05D003173 ORTHO05D003546 1.5e-17 94.0 215 34.4
TAR381G1677 Trochodendron aralioides HOM05D003173 ORTHO05D003546 1.5e-17 94.0 212 34.9
Cc10_g01130 Coffea canephora HOM05D003173 ORTHO05D003546 2.5e-17 93.2 237 33.3
Medtr1g026110 Medicago truncatula HOM05D003173 ORTHO05D003546 2.5e-17 93.2 224 32.6
Nn6g31907 Nelumbo nucifera HOM05D003173 ORTHO05D003546 2.5e-17 93.2 225 36.9
Sopen04g035610 Solanum pennellii HOM05D003173 ORTHO05D003546 2.5e-17 93.2 220 35.0
CANSAT25G2829 Cannabis sativa HOM05D003173 ORTHO05D003546 3.3e-17 92.8 240 32.1
Gohir.D05G257500 Gossypium hirsutum HOM05D003173 ORTHO05D003546 3.3e-17 92.8 219 33.8
VMungo1309G1265 Vigna mungo HOM05D003173 ORTHO05D003546 2.2e-16 90.1 242 36.0
CiPaw.08G069200 Carya illinoinensis HOM05D003173 ORTHO05D003546 2.8e-16 89.7 229 35.8
VMungo0647G1822 Vigna mungo HOM05D003173 ORTHO05D003546 2.8e-16 89.7 214 34.1
Peaxi162Scf00744g00026 Petunia axillaris HOM05D003173 ORTHO05D003546 6.3e-16 88.6 218 35.3
SGA_v2.0_scaffold19G08585 Striga asiatica HOM05D003173 ORTHO05D003546 6.3e-16 88.6 204 35.8
CSS0021479 Camellia sinensis var. sinensis HOM05D003173 ORTHO05D003546 8.2e-16 88.2 214 32.7
CSS0028811 Camellia sinensis var. sinensis HOM05D003173 ORTHO05D003546 1.1e-15 87.8 214 32.7
Oeu026120.1 Olea europaea HOM05D003173 ORTHO05D003546 1.1e-15 87.8 213 37.1
Peaxi162Scf00174g00083 Petunia axillaris HOM05D003173 ORTHO05D003546 1.1e-15 87.8 218 33.9
Solyc04g081960.1 Solanum lycopersicum HOM05D003173 ORTHO05D003546 1.1e-15 87.8 216 35.6
Eucgr.J02492 Eucalyptus grandis HOM05D003173 ORTHO05D003546 1.8e-15 87.0 225 33.8
FAN27G2702 Fragaria x ananassa HOM05D003173 ORTHO05D003546 3.1e-15 86.3 221 34.4
Glyma.14G222400 Glycine max HOM05D003173 ORTHO05D003546 3.1e-15 86.3 213 31.9
Glyma.04G020700 Glycine max HOM05D003173 ORTHO05D003546 4.1e-15 85.9 239 34.3
Phvul.009G019900 Phaseolus vulgaris HOM05D003173 ORTHO05D003546 5.3e-15 85.5 244 34.4
Rhsim06G0012200 Rhododendron simsii HOM05D003173 ORTHO05D003546 6.9e-15 85.1 217 34.1
Actinidia37954 Actinidia chinensis HOM05D003173 ORTHO05D003546 1.5e-14 84.0 209 34.9
MELO3C003727.2 Cucumis melo HOM05D003173 ORTHO05D003546 2.6e-14 83.2 210 35.2
FAN20G0850 Fragaria x ananassa HOM05D003173 ORTHO05D003546 2.6e-14 83.2 221 34.4
Lalb_Chr03g0033561 Lupinus albus HOM05D003173 ORTHO05D003546 3.4e-14 82.8 242 32.2
Lalb_Chr19g0131611 Lupinus albus HOM05D003173 ORTHO05D003546 3.4e-14 82.8 250 31.2
PGR031G0086 Punica granatum HOM05D003173 ORTHO05D003546 3.4e-14 82.8 238 31.5
THA.LOC104811444 Tarenaya hassleriana HOM05D003173 ORTHO05D003546 4.5e-14 82.4 227 32.2
FvH4_2g37950 Fragaria vesca HOM05D003173 ORTHO05D003546 7.7e-14 81.6 222 34.7
Carub.0002s2296 Capsella rubella HOM05D003173 ORTHO05D003546 1.0e-13 81.3 235 31.1
PGSC0003DMG400009955 Solanum tuberosum HOM05D003173 ORTHO05D003546 1.0e-13 81.3 226 32.7
arahy.Tifrunner.gnm1.ann1.S3QWAM Arachis hypogaea HOM05D003173 ORTHO05D003546 1.3e-13 80.9 243 31.7
Glyma.06G020800 Glycine max HOM05D003173 ORTHO05D003546 1.3e-13 80.9 238 34.0
CARHR069610 Cardamine hirsuta HOM05D003173 ORTHO05D003546 2.2e-13 80.1 238 31.1
Lalb_Chr23g0265991 Lupinus albus HOM05D003173 ORTHO05D003546 2.2e-13 80.1 214 31.3
Medtr3g114750 Medicago truncatula HOM05D003173 ORTHO05D003546 2.2e-13 80.1 220 31.8
Actinidia29769 Actinidia chinensis HOM05D000228 ORTHO05D001545 2.9e-13 79.7 212 33.0
RcHm_v2.0_Chr6g0303671 Rosa chinensis HOM05D003173 ORTHO05D003546 2.9e-13 79.7 220 35.9
Lsat_1_v5_gn_8_29221 Lactuca sativa HOM05D003173 ORTHO05D003546 3.8e-13 79.3 273 28.2
Sp5g31190 Schrenkiella parvula HOM05D003173 ORTHO05D003546 5.0e-13 79.0 238 29.8
AT1G76070 Arabidopsis thaliana HOM05D003173 ORTHO05D003546 6.5e-13 78.6 246 30.1
arahy.Tifrunner.gnm1.ann1.YK013F Arachis hypogaea HOM05D003173 ORTHO05D003546 6.5e-13 78.6 214 31.8
BcaB07g32036 Brassica carinata HOM05D003173 ORTHO05D003546 6.5e-13 78.6 224 32.6
vmacro04379 Vaccinium macrocarpon HOM05D003173 ORTHO05D003546 6.5e-13 78.6 202 32.2
Nn5g30846 Nelumbo nucifera HOM05D003173 ORTHO05D003546 8.5e-13 78.2 216 32.9
Dinv31893 Davidia involucrata HOM05D003173 ORTHO05D003546 1.1e-12 77.8 208 34.1
A06p16390 Brassica napus HOM05D003173 ORTHO05D003546 2.5e-12 76.6 228 32.0
Glyma.17G261300 Glycine max HOM05D003173 ORTHO05D003546 2.5e-12 76.6 209 34.0
ATR0661G366 Amborella trichopoda HOM05D003173 ORTHO05D003546 3.2e-12 76.3 228 33.3
AL2G36110 Arabidopsis lyrata HOM05D003173 ORTHO05D003546 3.2e-12 76.3 248 30.2
ClCG05G015410 Citrullus lanatus HOM05D003173 ORTHO05D003546 3.2e-12 76.3 206 34.5
arahy.Tifrunner.gnm1.ann1.WLLD0D Arachis hypogaea HOM05D003173 ORTHO05D003546 4.2e-12 75.9 238 30.7
BraA06t24743Z Brassica rapa HOM05D003173 ORTHO05D003546 4.2e-12 75.9 226 32.7
Thhalv10009337m.g Eutrema salsugineum HOM05D003173 ORTHO05D003546 4.2e-12 75.9 227 33.0
Peaxi162Scf00064g00081 Petunia axillaris HOM05D003173 ORTHO05D003546 4.2e-12 75.9 226 29.6
Solyc12g094390.1 Solanum lycopersicum HOM05D003173 ORTHO05D003546 4.2e-12 75.9 219 33.3
BraA02t07073Z Brassica rapa HOM05D003173 ORTHO05D003546 5.5e-12 75.5 238 29.4
Oeu051144.1 Olea europaea HOM05D003173 ORTHO05D003546 5.5e-12 75.5 207 31.4
DCAR_016740 Daucus carota HOM05D000228 ORTHO05D001545 7.2e-12 75.1 260 31.9
FAN15G3480 Fragaria x ananassa HOM05D003173 ORTHO05D003546 7.2e-12 75.1 222 33.8
MBI09_g01020_MAGBIO Magnolia biondii HOM05D003173 ORTHO05D003546 7.2e-12 75.1 216 36.1
PGSC0003DMG400029419 Solanum tuberosum HOM05D003173 ORTHO05D003546 9.4e-12 74.7 223 31.4
TPR.G26427 Trifolium pratense HOM05D003173 ORTHO05D003546 9.4e-12 74.7 225 33.3
BcaC05g25935 Brassica carinata HOM05D003173 ORTHO05D003546 1.2e-11 74.3 223 31.4
C05p18890 Brassica napus HOM05D003173 ORTHO05D003546 1.2e-11 74.3 223 31.4
BraA07t31692Z Brassica rapa HOM05D003173 ORTHO05D003546 1.2e-11 74.3 237 31.2
Aa31LG4G6190 Aethionema arabicum HOM05D003173 ORTHO05D003546 1.6e-11 73.9 256 29.3
CsaV3_3G046130 Cucumis sativus L. HOM05D003173 ORTHO05D003546 1.6e-11 73.9 179 36.9
Migut.C00894 Erythranthe guttata HOM05D003173 ORTHO05D003546 1.6e-11 73.9 216 33.3
BcaC08g47100 Brassica carinata HOM05D003173 ORTHO05D003546 2.1e-11 73.6 242 29.8
HanXRQChr14g0428491 Helianthus annuus HOM05D003173 ORTHO05D003546 2.1e-11 73.6 239 31.0
Sp1g18040 Schrenkiella parvula HOM05D003173 ORTHO05D003546 2.1e-11 73.6 219 30.6
Sopen12g031280 Solanum pennellii HOM05D003173 ORTHO05D003546 2.1e-11 73.6 223 30.0
Hma1.2p1_0023F.1_g015790 Hydrangea macrophylla HOM05D003173 ORTHO05D003546 2.7e-11 73.2 190 31.6
Lj5g0013533 Lotus japonicus HOM05D003173 ORTHO05D003546 4.7e-11 72.4 235 31.5
Sc15g0004670 Simmondsia chinensis HOM05D003173 ORTHO05D003546 4.7e-11 72.4 217 30.0
AL1G33140 Arabidopsis lyrata HOM05D003173 ORTHO05D003546 6.1e-11 72.0 223 30.5
EL10Ac1g02082 Beta vulgaris HOM05D003173 ORTHO05D003546 6.1e-11 72.0 233 30.9
BolC5t30588H Brassica oleracea HOM05D003173 ORTHO05D003546 6.1e-11 72.0 223 30.9
Nitab4.5_0000498g0080 Nicotiana tabacum HOM05D003173 ORTHO05D003546 7.9e-11 71.6 214 32.2
SalBow7G1496 Salvia bowleyana HOM05D003173 ORTHO05D003546 7.9e-11 71.6 209 34.4
TPR.G38194 Trifolium pratense HOM05D003173 ORTHO05D003546 7.9e-11 71.6 215 29.8
Psat5g012200 Pisum sativum HOM05D003173 ORTHO05D003546 1.0e-10 71.2 217 31.8
BolC6t40040H Brassica oleracea HOM05D003173 ORTHO05D003546 1.4e-10 70.9 245 30.6
PSO541G5041 Papaver somniferum HOM05D003173 ORTHO05D003546 1.8e-10 70.5 227 28.2
Thhalv10018992m.g Eutrema salsugineum HOM05D003173 ORTHO05D003546 3.0e-10 69.7 248 29.8
Lalb_Chr08g0246301 Lupinus albus HOM05D003173 ORTHO05D003546 3.0e-10 69.7 188 31.4
A02p20410 Brassica napus HOM05D003173 ORTHO05D003546 3.9e-10 69.3 235 28.5
Hma1.2p1_1598F.1_g292960 Hydrangea macrophylla HOM05D003173 ORTHO05D003546 3.9e-10 69.3 194 32.5
A07p41630 Brassica napus HOM05D003173 ORTHO05D003546 5.1e-10 68.9 246 30.5
Carub.0001s1981 Capsella rubella HOM05D003173 ORTHO05D003546 5.1e-10 68.9 226 31.0
BraA07t29310Z Brassica rapa HOM05D003173 ORTHO05D003546 6.7e-10 68.6 218 31.7
Ca_13485_v3 Cicer arietinum L. HOM05D003173 ORTHO05D003546 8.8e-10 68.2 223 30.5
Lsat_1_v5_gn_2_6961 Lactuca sativa HOM05D003173 ORTHO05D003546 1.1e-09 67.8 266 30.5
A07p15740 Brassica napus HOM05D003173 ORTHO05D003546 1.5e-09 67.4 219 31.1
Nitab4.5_0002353g0090 Nicotiana tabacum HOM05D003173 ORTHO05D003546 1.5e-09 67.4 214 31.3
A07p15840 Brassica napus HOM05D003173 ORTHO05D003546 2.0e-09 67.0 218 31.7
ECA233G2815 Erigeron canadensis HOM05D003173 ORTHO05D003546 2.0e-09 67.0 261 26.8
Atru.chr13.216 Acer truncatum HOM05D003173 ORTHO05D003546 3.3e-09 66.2 209 30.1
BcaC03g15643 Brassica carinata HOM05D003173 ORTHO05D003546 5.7e-09 65.5 235 28.1
BolC2t09356H Brassica oleracea HOM05D003173 ORTHO05D003546 5.7e-09 65.5 235 28.1
ECA238G0569 Erigeron canadensis HOM05D000315 ORTHO05D000527 5.7e-09 65.5 257 28.0
HPP92_002481 Vanilla planifolia HOM05D003173 ORTHO05D003546 5.7e-09 65.5 197 29.9
C02p33480 Brassica napus HOM05D003173 ORTHO05D003546 9.7e-09 64.7 235 28.1
CAN.G401.21 Capsicum annuum HOM05D003173 ORTHO05D003546 9.7e-09 64.7 229 27.9
Nitab4.5_0003030g0080 Nicotiana tabacum HOM05D003173 ORTHO05D003546 9.7e-09 64.7 169 33.1
BcaB03g14324 Brassica carinata HOM05D003173 ORTHO05D003546 2.2e-08 63.5 215 29.3
CDE05G3154 Ceratophyllum demersum HOM05D001535 ORTHO05D003710 2.2e-08 63.5 195 32.8
BolC7t42850H Brassica oleracea HOM05D003173 ORTHO05D003546 2.8e-08 63.2 219 30.1
HanXRQChr12g0366681 Helianthus annuus HOM05D003173 ORTHO05D003546 2.8e-08 63.2 182 31.9
AT1G20310 Arabidopsis thaliana HOM05D003173 ORTHO05D003546 3.7e-08 62.8 226 29.2
Lj4g0000766 Lotus japonicus HOM05D003173 ORTHO05D003546 3.7e-08 62.8 144 29.9
MBI17_g07971_MAGBIO Magnolia biondii HOM05D003173 ORTHO05D003546 4.8e-08 62.4 181 27.6
unitig_748.g7605 Utricularia gibba HOM05D003173 ORTHO05D003546 6.3e-08 62.0 211 28.4
BcaNung03372 Brassica carinata HOM05D003173 ORTHO05D003546 8.2e-08 61.6 220 30.5
C07p23130 Brassica napus HOM05D003173 ORTHO05D003546 8.2e-08 61.6 220 30.5
Potri.005G107500 Populus trichocarpa HOM05D003173 ORTHO05D003546 1.4e-07 60.8 214 28.5
Thecc.01G011100 Theobroma cacao HOM05D003173 ORTHO05D003546 1.8e-07 60.5 139 37.4
unitig_32.g11393 Utricularia gibba HOM05D002221 ORTHO05D002626 2.4e-07 60.1 208 28.4
Aa31LG7G4670 Aethionema arabicum HOM05D003173 ORTHO05D003546 5.3e-07 58.9 190 30.5
arahy.Tifrunner.gnm1.ann1.L00MPK Arachis hypogaea HOM05D003173 ORTHO05D003546 5.3e-07 58.9 156 28.8
Duzib264G0532 Durio zibethinus HOM05D003173 ORTHO05D003546 7.0e-07 58.5 192 29.7
BcaC08g47302 Brassica carinata HOM05D003173 ORTHO05D003546 2.6e-06 56.6 191 29.8
Oeu057579.1 Olea europaea HOM05D003173 ORTHO05D003546 3.5e-06 56.2 205 29.3
PSO675G7160 Papaver somniferum HOM05D003173 ORTHO05D003546 3.5e-06 56.2 230 25.7
Zm00001eb331720 Zea mays HOM05D003173 ORTHO05D003546 5.9e-06 55.5 193 32.1


User provided reference genes

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