Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI08014 Sapria himalayana HOM05D006215 ORTHO05D007719 3.0e-87 325.1 158 100.0
Gohir.D01G096200 Gossypium hirsutum HOM05D006215 ORTHO05D007719 8.3e-37 157.5 147 55.8
TWI12G0400 Tripterygium wilfordii HOM05D006215 ORTHO05D007719 1.1e-36 157.1 107 67.3
Manes.18G010300 Manihot esculenta HOM05D006215 ORTHO05D007719 2.4e-36 156.0 120 63.3
Gorai.002G121700 Gossypium raimondii HOM05D006215 ORTHO05D007719 3.1e-36 155.6 147 55.1
Potri.002G018100 Populus trichocarpa HOM05D006215 ORTHO05D007719 4.1e-36 155.2 114 63.2
DCAR_009503 Daucus carota HOM05D006215 ORTHO05D007719 7.0e-36 154.5 127 59.8
MELO3C003734.2 Cucumis melo HOM05D006215 ORTHO05D007719 1.2e-35 153.7 94 73.4
CsaV3_3G046060 Cucumis sativus L. HOM05D006215 ORTHO05D007719 1.2e-35 153.7 94 72.3
Gohir.A01G109400 Gossypium hirsutum HOM05D006215 ORTHO05D007719 1.2e-35 153.7 147 55.1
Lalb_Chr23g0266051 Lupinus albus HOM05D006215 ORTHO05D007719 2.0e-35 152.9 98 70.4
Nitab4.5_0004361g0040 Nicotiana tabacum HOM05D006215 ORTHO05D007719 2.0e-35 152.9 121 62.0
Lj1g0006385 Lotus japonicus HOM05D006215 ORTHO05D007719 2.7e-35 152.5 94 75.5
Glyma.06G021900 Glycine max HOM05D006215 ORTHO05D007719 3.5e-35 152.1 109 67.9
COL.COLO4_26102 Corchorus olitorius HOM05D006215 ORTHO05D007719 4.5e-35 151.8 116 61.2
Psat5g012560 Pisum sativum HOM05D006215 ORTHO05D007719 4.5e-35 151.8 94 74.5
Solyc04g081850.4 Solanum lycopersicum HOM05D006215 ORTHO05D007719 4.5e-35 151.8 107 69.2
PGSC0003DMG400009949 Solanum tuberosum HOM05D006215 ORTHO05D007719 4.5e-35 151.8 150 56.0
Thecc.08G049400 Theobroma cacao HOM05D006215 ORTHO05D007719 4.5e-35 151.8 114 63.2
Cpa.g.sc26.282 Carica papaya HOM05D006215 ORTHO05D007719 5.9e-35 151.4 126 58.7
QL02p012562 Quercus lobata HOM05D006215 ORTHO05D007719 5.9e-35 151.4 94 72.3
Ciclev10002478m.g Citrus clementina HOM05D006215 ORTHO05D007719 1.3e-34 150.2 94 71.3
Sopen04g035480 Solanum pennellii HOM05D006215 ORTHO05D007719 1.3e-34 150.2 107 68.2
Cc10_g01280 Coffea canephora HOM05D006215 ORTHO05D007719 2.3e-34 149.4 119 59.7
Sabra02G0014400 Salix brachista HOM05D006215 ORTHO05D007719 2.3e-34 149.4 94 69.1
Duzib041G0142 Durio zibethinus HOM05D006215 ORTHO05D007719 2.9e-34 149.1 104 66.3
MD03G1242500 Malus domestica HOM05D006215 ORTHO05D007719 2.9e-34 149.1 112 64.3
Eucgr.F03725 Eucalyptus grandis HOM05D006215 ORTHO05D007719 3.8e-34 148.7 94 67.0
Prupe.4G165400 Prunus persica HOM05D006215 ORTHO05D007719 3.8e-34 148.7 93 72.0
vmacro21863 Vaccinium macrocarpon HOM05D006215 ORTHO05D007719 3.8e-34 148.7 106 65.1
arahy.Tifrunner.gnm1.ann1.SEC0EX Arachis hypogaea HOM05D006215 ORTHO05D007719 5.0e-34 148.3 101 68.3
CSS0005676 Camellia sinensis var. sinensis HOM05D006215 ORTHO05D007719 5.0e-34 148.3 121 59.5
CSS0039588 Camellia sinensis var. sinensis HOM05D006215 ORTHO05D007719 5.0e-34 148.3 121 59.5
Dinv31883 Davidia involucrata HOM05D006215 ORTHO05D007719 6.6e-34 147.9 94 70.2
SalBow7G2905 Salvia bowleyana HOM05D006215 ORTHO05D007719 6.6e-34 147.9 94 70.2
Phvul.009G018900 Phaseolus vulgaris HOM05D006215 ORTHO05D007719 8.6e-34 147.5 106 67.0
CiPaw.07G144900 Carya illinoinensis HOM05D006215 ORTHO05D007719 1.1e-33 147.1 94 69.1
FvH4_3g18360 Fragaria vesca HOM05D006215 ORTHO05D007719 1.1e-33 147.1 112 60.7
FAN11G1504 Fragaria x ananassa HOM05D006215 ORTHO05D007719 1.1e-33 147.1 112 60.7
Glyma.04G021700 Glycine max HOM05D006215 ORTHO05D007719 1.5e-33 146.7 94 72.3
RcHm_v2.0_Chr5g0031011 Rosa chinensis HOM05D006215 ORTHO05D007719 1.9e-33 146.4 112 60.7
CANSAT25G1322 Cannabis sativa HOM05D006215 ORTHO05D007719 2.5e-33 146.0 102 64.7
Cfa013993 Carpinus fangiana HOM05D006215 ORTHO05D007719 2.5e-33 146.0 94 72.3
Medtr3g114470 Medicago truncatula HOM05D006215 ORTHO05D007719 2.5e-33 146.0 93 73.1
Sed0008956 Sechium edule HOM05D006215 ORTHO05D007719 2.5e-33 146.0 108 62.0
Lsat_1_v5_gn_8_29640 Lactuca sativa HOM05D006215 ORTHO05D007719 4.3e-33 145.2 92 72.8
arahy.Tifrunner.gnm1.ann1.89BLSN Arachis hypogaea HOM05D006215 ORTHO05D007719 5.6e-33 144.8 91 71.4
VMungo1215G3215 Vigna mungo HOM05D006215 ORTHO05D007719 5.6e-33 144.8 94 71.3
Lj4C18G8 Lonicera japonica HOM05D000114 ORTHO05D009837 7.3e-33 144.4 94 70.2
TPR.G38171 Trifolium pratense HOM05D006215 ORTHO05D007719 7.3e-33 144.4 89 75.3
FAN25G2739 Fragaria x ananassa HOM05D006215 ORTHO05D007719 9.5e-33 144.1 112 59.8
ECA233G5922 Erigeron canadensis HOM05D000114 ORTHO05D000075 1.2e-32 143.7 104 65.4
HanXRQChr13g0386921 Helianthus annuus HOM05D006215 ORTHO05D007719 1.2e-32 143.7 92 70.7
Sc15g0004750 Simmondsia chinensis HOM05D006215 ORTHO05D007719 1.2e-32 143.7 117 58.1
Rhsim06G0017400 Rhododendron simsii HOM05D006215 ORTHO05D007719 1.6e-32 143.3 94 66.0
Hund01696 Selenicereus undatus HOM05D006215 ORTHO05D007719 2.1e-32 142.9 109 60.6
GSVIVG01009974001 Vitis vinifera HOM05D006215 ORTHO05D009429 2.1e-32 142.9 110 60.9
Nn5g30812 Nelumbo nucifera HOM05D006215 ORTHO05D007719 2.8e-32 142.5 90 66.7
Atru.chr13.240 Acer truncatum HOM05D006215 ORTHO05D007719 3.6e-32 142.1 141 52.5
HPP92_025438 Vanilla planifolia HOM05D006215 ORTHO05D007719 4.7e-32 141.7 111 63.1
Migut.C00887 Erythranthe guttata HOM05D006215 ORTHO05D007719 6.1e-32 141.4 117 58.1
Ca_15473_v3 Cicer arietinum L. HOM05D006215 ORTHO05D007719 2.3e-31 139.4 90 72.2
Aa31LG4G6130 Aethionema arabicum HOM05D006215 ORTHO05D007719 3.0e-31 139.0 97 67.0
MSTRG.1158 Avicennia marina HOM05D006215 ORTHO05D007719 4.0e-31 138.7 118 56.8
SGA_v2.0_scaffold292G47375 Striga asiatica HOM05D006215 ORTHO05D007719 4.0e-31 138.7 113 61.1
EL10Ac1g02129 Beta vulgaris HOM05D006215 ORTHO05D007719 5.2e-31 138.3 93 65.6
C06p49900 Brassica napus HOM05D006215 ORTHO05D007719 2.6e-30 136.0 91 67.0
Haze_22683 Corylus avellana HOM05D006215 ORTHO05D007719 3.4e-30 135.6 113 60.2
A07p41490 Brassica napus HOM05D006215 ORTHO05D007719 4.4e-30 135.2 93 66.7
BraA07t31681Z Brassica rapa HOM05D006215 ORTHO05D007719 4.4e-30 135.2 93 66.7
CDE04G3084 Ceratophyllum demersum HOM05D006215 ORTHO05D007719 4.4e-30 135.2 131 51.1
FAN21G0515 Fragaria x ananassa HOM05D006215 ORTHO05D007719 7.5e-30 134.4 105 59.0
CANSAT80G2378 Cannabis sativa HOM05D006215 ORTHO05D007719 9.8e-30 134.0 98 62.2
Oeu033622.1 Olea europaea HOM05D006215 ORTHO05D007719 1.3e-29 133.7 143 49.0
BcaB02g07052 Brassica carinata HOM05D006215 ORTHO05D007719 1.7e-29 133.3 94 62.8
CARHR069510 Cardamine hirsuta HOM05D006215 ORTHO05D007719 1.7e-29 133.3 94 64.9
BcaC08g47309 Brassica carinata HOM05D006215 ORTHO05D007719 2.2e-29 132.9 91 65.9
A07p28630 Brassica napus HOM05D006215 ORTHO05D007719 2.2e-29 132.9 108 57.4
BraA07t30504Z Brassica rapa HOM05D006215 ORTHO05D007719 2.2e-29 132.9 108 57.4
BcaC08g45544 Brassica carinata HOM05D006215 ORTHO05D007719 2.9e-29 132.5 94 63.8
C06p32240 Brassica napus HOM05D006215 ORTHO05D007719 2.9e-29 132.5 94 63.8
BolC6t38347H Brassica oleracea HOM05D006215 ORTHO05D007719 2.9e-29 132.5 94 63.8
AT1G75980 Arabidopsis thaliana HOM05D006215 ORTHO05D007719 3.7e-29 132.1 90 70.0
AUR62013912 Chenopodium quinoa HOM05D006215 ORTHO05D007719 8.3e-29 131.0 87 67.8
Aqoxy5G01831 Aquilegia oxysepala HOM05D006215 ORTHO05D007719 1.1e-28 130.6 122 54.9
BcaB05g24966 Brassica carinata HOM05D006215 ORTHO05D007719 1.4e-28 130.2 94 63.8
unitig_32.g11202 Utricularia gibba HOM05D006215 ORTHO05D007719 1.4e-28 130.2 122 57.4
CAN.G311.58 Capsicum annuum HOM05D006215 ORTHO05D007719 1.8e-28 129.8 92 66.3
AL2G36000 Arabidopsis lyrata HOM05D006215 ORTHO05D007719 3.2e-28 129.0 89 68.5
Carub.0002s2287 Capsella rubella HOM05D006215 ORTHO05D007719 4.1e-28 128.6 90 66.7
ATR1088G027 Amborella trichopoda HOM05D006215 ORTHO05D007719 5.4e-28 128.3 105 61.9
Ah.06g187190 Amaranthus hybridus HOM05D006215 ORTHO05D007719 7.0e-28 127.9 115 54.8
Thhalv10019087m.g Eutrema salsugineum HOM05D006215 ORTHO05D007719 7.0e-28 127.9 91 64.8
CANSAT25G3730 Cannabis sativa HOM05D006215 ORTHO05D007719 1.2e-27 127.1 94 60.6
THA.LOC104811433 Tarenaya hassleriana HOM05D006215 ORTHO05D007719 1.6e-27 126.7 117 55.6
Sp5g31100 Schrenkiella parvula HOM05D006215 ORTHO05D007719 2.7e-27 125.9 90 64.4
PSO339G6481 Papaver somniferum HOM05D006215 ORTHO05D007719 3.5e-27 125.6 99 58.6
PSO384G0480 Papaver somniferum HOM05D006215 ORTHO05D007719 7.8e-27 124.4 99 57.6
Zm00001eb209250 Zea mays HOM05D006215 ORTHO05D007719 1.3e-26 123.6 92 59.8
SEGI_18034 Sequoiadendron giganteum HOM05D006215 ORTHO05D007719 1.4e-23 113.6 88 61.4
ClCG05G015490 Citrullus lanatus HOM05D006215 ORTHO05D007719 3.4e-22 109.0 94 58.5
Actinidia17011 Actinidia chinensis HOM05D006215 ORTHO05D007719 2.2e-21 106.3 64 73.4
Glyma.02G160800 Glycine max HOM05D006215 ORTHO05D007719 2.9e-21 105.9 60 78.3
Pp3c20_3890 Physcomitrium patens HOM05D006215 ORTHO05D007719 1.4e-20 103.6 104 49.0
Rhsim06G0015300 Rhododendron simsii HOM05D006215 ORTHO05D007719 3.2e-20 102.4 94 52.1
AUR62018279 Chenopodium quinoa HOM05D006215 ORTHO05D007719 4.6e-19 98.6 59 71.2
Actinidia15453 Actinidia chinensis HOM05D006215 ORTHO05D007719 6.6e-18 94.7 59 67.8
Os02g0120400 Oryza sativa ssp. japonica HOM05D006215 ORTHO05D007719 4.3e-17 92.0 55 70.9
SMO367G0408 Selaginella moellendorffii HOM05D006215 ORTHO05D007719 8.1e-16 87.8 95 47.4
PGR083G2507 Punica granatum HOM05D006215 ORTHO05D007719 1.4e-15 87.0 92 52.2
AagrBONN_evm.TU.Sc2ySwM_117.1002 Anthoceros agrestis HOM05D006215 ORTHO05D007719 1.8e-15 86.7 89 50.6
Mapoly0001s0313 Marchantia polymorpha HOM05D006215 ORTHO05D007719 5.2e-15 85.1 85 48.2
Peaxi162Scf00860g00212 Petunia axillaris HOM05D006215 ORTHO05D007719 8.3e-13 77.8 94 45.7
Medtr6g083100 Medicago truncatula HOM05D006215 ORTHO05D007719 3.0e-10 69.3 106 41.5
Duzib093G1443 Durio zibethinus HOM05D006215 ORTHO05D007719 6.6e-10 68.2 71 52.1
TAR625G0502 Trochodendron aralioides HOM05D006215 ORTHO05D007719 9.5e-09 64.3 59 50.8
BolC6t40028H Brassica oleracea HOM05D006215 ORTHO05D007719 2.1e-08 63.2 50 56.0


User provided reference genes

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