Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI07946 Sapria himalayana HOM05D006709 ORTHO05D008329 2.6e-49 198.4 96 100.0
SalBow7G4607 Salvia bowleyana HOM05D006709 ORTHO05D008329 6.0e-14 80.9 73 60.3
Migut.C00352 Erythranthe guttata HOM05D006709 ORTHO05D008329 1.3e-13 79.7 60 66.7
arahy.Tifrunner.gnm1.ann1.6A59KD Arachis hypogaea HOM05D006709 ORTHO05D008329 3.0e-13 78.6 66 63.6
arahy.Tifrunner.gnm1.ann1.ZQQY3F Arachis hypogaea HOM05D006709 ORTHO05D008329 3.0e-13 78.6 66 63.6
Manes.18G001600 Manihot esculenta HOM05D006709 ORTHO05D008329 3.9e-13 78.2 60 68.3
unitig_37.g13048 Utricularia gibba HOM05D006709 ORTHO05D008329 6.6e-13 77.4 63 65.1
Cpa.g.sc26.6 Carica papaya HOM05D006709 ORTHO05D008329 8.6e-13 77.0 44 77.3
GSVIVG01013436001 Vitis vinifera HOM05D006709 ORTHO05D008329 8.6e-13 77.0 66 63.6
TWI56G0059 Tripterygium wilfordii HOM05D006709 ORTHO05D008329 1.1e-12 76.6 66 62.1
Dinv05492 Davidia involucrata HOM05D006709 ORTHO05D008329 1.5e-12 76.3 66 60.6
RcHm_v2.0_Chr7g0216881 Rosa chinensis HOM05D006709 ORTHO05D008329 1.5e-12 76.3 66 59.1
Duzib151G1059 Durio zibethinus HOM05D006709 ORTHO05D008329 1.9e-12 75.9 54 66.7
Prupe.1G298300 Prunus persica HOM05D006709 ORTHO05D008329 1.9e-12 75.9 66 62.1
vmacro21761 Vaccinium macrocarpon HOM05D006709 ORTHO05D008329 1.9e-12 75.9 60 63.3
HanXRQChr12g0367591 Helianthus annuus HOM05D006709 ORTHO05D008329 2.5e-12 75.5 63 63.5
Potri.005G257100 Populus trichocarpa HOM05D006709 ORTHO05D008329 2.5e-12 75.5 66 59.1
Thecc.08G099000 Theobroma cacao HOM05D006709 ORTHO05D008329 2.5e-12 75.5 63 60.3
Actinidia15528 Actinidia chinensis HOM05D006709 ORTHO05D008329 3.3e-12 75.1 63 60.3
Thhalv10017474m.g Eutrema salsugineum HOM05D006709 ORTHO05D008329 3.3e-12 75.1 50 68.0
Sabra05G0199000 Salix brachista HOM05D006709 ORTHO05D008329 3.3e-12 75.1 66 57.6
Actinidia17082 Actinidia chinensis HOM05D006709 ORTHO05D008329 4.3e-12 74.7 54 66.7
Lj4A4T20 Lonicera japonica HOM05D006709 ORTHO05D008329 4.3e-12 74.7 60 63.3
Nitab4.5_0007096g0020 Nicotiana tabacum HOM05D006709 ORTHO05D008329 4.3e-12 74.7 66 60.6
Psat5g008400 Pisum sativum HOM05D006709 ORTHO05D008329 4.3e-12 74.7 66 60.6
Ca_15382_v3 Cicer arietinum L. HOM05D006709 ORTHO05D008329 5.6e-12 74.3 73 53.4
FvH4_5g26200 Fragaria vesca HOM05D006709 ORTHO05D008329 5.6e-12 74.3 66 56.1
FAN08G1650 Fragaria x ananassa HOM05D006709 ORTHO05D008329 5.6e-12 74.3 66 56.1
FAN13G1766 Fragaria x ananassa HOM05D006709 ORTHO05D008329 5.6e-12 74.3 66 56.1
FAN18G1826 Fragaria x ananassa HOM05D006709 ORTHO05D008329 5.6e-12 74.3 66 56.1
Hma1.2p1_0489F.1_g164140 Hydrangea macrophylla HOM05D006709 ORTHO05D008329 5.6e-12 74.3 44 75.0
Phvul.009G008700 Phaseolus vulgaris HOM05D006709 ORTHO05D008329 5.6e-12 74.3 66 60.6
Sp4g15940 Schrenkiella parvula HOM05D006709 ORTHO05D008329 5.6e-12 74.3 56 66.1
TAR628G1717 Trochodendron aralioides HOM05D006709 ORTHO05D008329 5.6e-12 74.3 50 70.0
Atru.chr13.44 Acer truncatum HOM05D006709 ORTHO05D008329 7.3e-12 73.9 63 60.3
Duzib212G0839 Durio zibethinus HOM05D006709 ORTHO05D008329 7.3e-12 73.9 60 61.7
Oeu035869.2 Olea europaea HOM05D006709 ORTHO05D008329 7.3e-12 73.9 44 75.0
VMungo1309G2593 Vigna mungo HOM05D006709 ORTHO05D008329 7.3e-12 73.9 66 60.6
Lj1g0007500 Lotus japonicus HOM05D006709 ORTHO05D008329 9.6e-12 73.6 50 70.0
TPR.G38103 Trifolium pratense HOM05D006709 ORTHO05D008329 9.6e-12 73.6 66 59.1
MSTRG.1007 Avicennia marina HOM05D006709 ORTHO05D008329 1.2e-11 73.2 56 64.3
CSS0027441 Camellia sinensis var. sinensis HOM05D006709 ORTHO05D008329 1.2e-11 73.2 60 60.0
Ciclev10002952m.g Citrus clementina HOM05D006709 ORTHO05D008329 1.2e-11 73.2 69 55.1
Haze_22867 Corylus avellana HOM05D006709 ORTHO05D008329 1.2e-11 73.2 66 57.6
Gohir.A09G212700 Gossypium hirsutum HOM05D006709 ORTHO05D008329 1.2e-11 73.2 60 60.0
Gohir.D09G206300 Gossypium hirsutum HOM05D006709 ORTHO05D008329 1.2e-11 73.2 60 60.0
Gorai.006G230200 Gossypium raimondii HOM05D006709 ORTHO05D008329 1.2e-11 73.2 60 60.0
PGR031G3816 Punica granatum HOM05D006709 ORTHO05D008329 1.2e-11 73.2 60 60.0
Hund05070 Selenicereus undatus HOM05D006709 ORTHO05D008329 1.2e-11 73.2 60 60.0
ClCG07G009870 Citrullus lanatus HOM05D006709 ORTHO05D008329 1.6e-11 72.8 60 60.0
Medtr3g116150 Medicago truncatula HOM05D006709 ORTHO05D008329 1.6e-11 72.8 50 70.0
Sed0015665 Sechium edule HOM05D006709 ORTHO05D008329 1.6e-11 72.8 64 57.8
AL4G29260 Arabidopsis lyrata HOM05D006709 ORTHO05D008329 2.1e-11 72.4 66 57.6
BcaB01g03928 Brassica carinata HOM05D006709 ORTHO05D008329 2.1e-11 72.4 50 66.0
CANSAT78G0412 Cannabis sativa HOM05D006709 ORTHO05D008329 2.1e-11 72.4 60 58.3
CDE05G2376 Ceratophyllum demersum HOM05D006709 ORTHO05D008329 2.1e-11 72.4 73 54.8
MELO3C016084.2 Cucumis melo HOM05D006709 ORTHO05D008329 2.1e-11 72.4 64 57.8
Glyma.04G014200 Glycine max HOM05D006709 ORTHO05D008329 2.1e-11 72.4 66 59.1
Peaxi162Scf00385g00310 Petunia axillaris HOM05D006709 ORTHO05D008329 2.1e-11 72.4 73 53.4
SEGI_16420 Sequoiadendron giganteum HOM05D006709 ORTHO05D008329 2.1e-11 72.4 80 48.8
Aa31LG9G13520 Aethionema arabicum HOM05D006709 ORTHO05D008329 2.8e-11 72.0 50 66.0
Carub.0004s1522 Capsella rubella HOM05D006709 ORTHO05D008329 2.8e-11 72.0 50 68.0
Nn5g31057 Nelumbo nucifera HOM05D006709 ORTHO05D008329 2.8e-11 72.0 50 66.0
QL02p015873 Quercus lobata HOM05D006709 ORTHO05D008329 2.8e-11 72.0 60 60.0
Aqoxy5G00959 Aquilegia oxysepala HOM05D006709 ORTHO05D008329 3.6e-11 71.6 63 57.1
AT2G33585 Arabidopsis thaliana HOM05D006709 ORTHO05D008329 3.6e-11 71.6 50 68.0
BcaC02g07804 Brassica carinata HOM05D006709 ORTHO05D008329 3.6e-11 71.6 47 66.0
BolC4t27784H Brassica oleracea HOM05D006709 ORTHO05D008329 3.6e-11 71.6 47 66.0
CARHR127610 Cardamine hirsuta HOM05D006709 ORTHO05D008329 3.6e-11 71.6 50 66.0
Rhsim06G0002600 Rhododendron simsii HOM05D006709 ORTHO05D008329 3.6e-11 71.6 44 70.5
Zm00001eb199960 Zea mays HOM05D006709 ORTHO05D008329 3.6e-11 71.6 98 41.8
C04p63090 Brassica napus HOM05D006709 ORTHO05D008329 4.7e-11 71.2 47 66.0
Lalb_Chr03g0035821 Lupinus albus HOM05D006709 ORTHO05D008329 4.7e-11 71.2 63 58.7
Solyc04g082800.3 Solanum lycopersicum HOM05D006709 ORTHO05D008329 4.7e-11 71.2 66 57.6
Sopen04g036440 Solanum pennellii HOM05D006709 ORTHO05D008329 4.7e-11 71.2 66 57.6
EL10Ac1g01866 Beta vulgaris HOM05D006709 ORTHO05D008329 6.2e-11 70.9 60 61.7
BcaC01g05832 Brassica carinata HOM05D006709 ORTHO05D008329 6.2e-11 70.9 47 66.0
A03p18800 Brassica napus HOM05D006709 ORTHO05D008329 6.2e-11 70.9 47 66.0
C03p21970 Brassica napus HOM05D006709 ORTHO05D008329 6.2e-11 70.9 47 66.0
BolC3t14580H Brassica oleracea HOM05D006709 ORTHO05D008329 6.2e-11 70.9 47 66.0
BraA03t11140Z Brassica rapa HOM05D006709 ORTHO05D008329 6.2e-11 70.9 47 66.0
CSS0014821 Camellia sinensis var. sinensis HOM05D006709 ORTHO05D008329 6.2e-11 70.9 66 54.5
Lsat_1_v5_gn_8_26041 Lactuca sativa HOM05D006709 ORTHO05D008329 6.2e-11 70.9 66 59.1
MBI04_g31214_MAGBIO Magnolia biondii HOM05D006709 ORTHO05D008329 6.2e-11 70.9 66 54.5
PSO017G0586 Papaver somniferum HOM05D006709 ORTHO05D008329 6.2e-11 70.9 58 62.1
Lalb_Chr04g0257801 Lupinus albus HOM05D006709 ORTHO05D008329 8.1e-11 70.5 63 55.6
MD06G1003100 Malus domestica HOM05D006709 ORTHO05D008329 8.1e-11 70.5 60 60.0
CAN.G1330.15 Capsicum annuum HOM05D006709 ORTHO05D008329 1.1e-10 70.1 66 56.1
Oeu035760.1 Olea europaea HOM05D006709 ORTHO05D008329 1.1e-10 70.1 63 55.6
Ah.11g042070 Amaranthus hybridus HOM05D006709 ORTHO05D008329 1.4e-10 69.7 60 56.7
Eucgr.F03607 Eucalyptus grandis HOM05D006709 ORTHO05D008329 1.4e-10 69.7 63 57.1
ATR0605G117 Amborella trichopoda HOM05D006709 ORTHO05D008329 1.8e-10 69.3 63 58.7
ECA233G3448 Erigeron canadensis HOM05D006709 ORTHO05D008329 1.8e-10 69.3 54 61.1
Lsat_1_v5_gn_9_48241 Lactuca sativa HOM05D006709 ORTHO05D008329 1.8e-10 69.3 50 64.0
Sc15g0004050 Simmondsia chinensis HOM05D006709 ORTHO05D008329 1.8e-10 69.3 66 57.6
FAN04G1417 Fragaria x ananassa HOM05D006709 ORTHO05D008329 2.4e-10 68.9 61 55.7
Glyma.06G014200 Glycine max HOM05D006709 ORTHO05D008329 2.4e-10 68.9 58 65.5
PGSC0003DMG400009925 Solanum tuberosum HOM05D006709 ORTHO05D008329 2.4e-10 68.9 57 59.6
Os08g0512900 Oryza sativa ssp. japonica HOM05D006709 ORTHO05D008329 3.1e-10 68.6 63 54.0
Manes.05G128900 Manihot esculenta HOM05D006709 ORTHO05D008329 6.8e-10 67.4 54 61.1
BcaB06g28702 Brassica carinata HOM05D006709 ORTHO05D008329 2.0e-09 65.9 47 61.7
A04p25850 Brassica napus HOM05D006709 ORTHO05D008329 2.6e-09 65.5 47 61.7
BraA04t18087Z Brassica rapa HOM05D006709 ORTHO05D008329 2.6e-09 65.5 47 61.7
HPP92_015749 Vanilla planifolia HOM05D006709 ORTHO05D008329 5.8e-09 64.3 41 68.3
COL.COLO4_12285 Corchorus olitorius HOM05D006709 ORTHO05D008329 2.9e-08 62.0 38 68.4
Cc10_g00210 Coffea canephora HOM05D006709 ORTHO05D008329 4.9e-08 61.2 63 55.6
BcaC01g05833 Brassica carinata HOM05D006709 ORTHO05D008329 8.4e-08 60.5 35 77.1
AagrBONN_evm.TU.Sc2ySwM_344.3753 Anthoceros agrestis HOM05D006709 ORTHO05D008329 9.3e-07 57.0 50 48.0
CsaV3_4G008460 Cucumis sativus L. HOM05D006709 ORTHO05D008329 4.6e-06 54.7 45 57.8


User provided reference genes

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