Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI07122 Sapria himalayana HOM05D000034 ORTHO05D000037 5.5e-68 260.8 125 100.0
SHI33987 Sapria himalayana HOM05D000034 ORTHO05D000037 3.5e-22 108.6 99 55.6
SHI11769 Sapria himalayana HOM05D000034 ORTHO05D000037 1.4e-18 96.7 94 54.3
SHI02268 Sapria himalayana HOM05D000034 ORTHO05D000037 6.8e-18 94.4 91 54.9
Rhsim04G0111300 Rhododendron simsii HOM05D000034 ORTHO05D000037 2.4e-15 85.9 89 49.4
Rhsim04G0145700 Rhododendron simsii HOM05D000034 ORTHO05D000037 2.4e-15 85.9 105 46.7
Rhsim05G0142800 Rhododendron simsii HOM05D000034 ORTHO05D000037 2.4e-15 85.9 105 46.7
Rhsim05G0210200 Rhododendron simsii HOM05D000034 ORTHO05D000037 2.4e-15 85.9 105 46.7
Rhsim08G0056200 Rhododendron simsii HOM05D000034 ORTHO05D000037 2.4e-15 85.9 105 46.7
Rhsim09G0068200 Rhododendron simsii HOM05D000034 ORTHO05D000037 2.4e-15 85.9 105 46.7
Nn7g38140 Nelumbo nucifera HOM05D000034 ORTHO05D000037 5.4e-15 84.7 93 47.3
SHI11570 Sapria himalayana HOM05D000034 ORTHO05D000037 7.0e-15 84.3 76 56.6
SHI03288 Sapria himalayana HOM05D000034 ORTHO05D000037 8.6e-13 77.4 129 34.1
HanXRQChr03g0077651 Helianthus annuus HOM05D000034 ORTHO05D000037 1.1e-12 77.0 104 44.2
ECA232G1773 Erigeron canadensis HOM05D000034 ORTHO05D000037 1.2e-11 73.6 130 36.9
SHI00882 Sapria himalayana HOM05D000034 ORTHO05D000037 1.2e-11 73.6 40 80.0
SHI15738 Sapria himalayana HOM05D000034 ORTHO05D000037 1.2e-11 73.6 79 49.4
HanXRQChr16g0506241 Helianthus annuus HOM05D000034 ORTHO05D000037 1.6e-11 73.2 113 38.9
PSO210G5707 Papaver somniferum HOM05D000034 ORTHO05D000037 1.6e-11 73.2 93 41.9
PSO801G0789 Papaver somniferum HOM05D000034 ORTHO05D000037 1.6e-11 73.2 93 41.9
SHI12875 Sapria himalayana HOM05D000034 ORTHO05D000037 1.6e-11 73.2 109 37.6
SHI22743 Sapria himalayana HOM05D000034 ORTHO05D000037 1.6e-11 73.2 79 49.4
SHI29151 Sapria himalayana HOM05D000034 ORTHO05D000037 2.1e-11 72.8 39 82.1
ECA238G2489 Erigeron canadensis HOM05D000034 ORTHO05D000037 2.8e-11 72.4 81 46.9
PSO210G3506 Papaver somniferum HOM05D000034 ORTHO05D000037 2.8e-11 72.4 93 40.9
ECA247G4088 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.6e-11 72.0 130 36.2
PSO210G2901 Papaver somniferum HOM05D000034 ORTHO05D000285 4.7e-11 71.6 93 41.9
HanXRQChr12g0361021 Helianthus annuus HOM05D000034 ORTHO05D000037 6.2e-11 71.2 79 48.1
PSO063G6700 Papaver somniferum HOM05D000034 ORTHO05D000037 6.2e-11 71.2 93 40.9
PSO384G0215 Papaver somniferum HOM05D000034 ORTHO05D000037 6.2e-11 71.2 93 41.9
PSO478G0302 Papaver somniferum HOM05D000034 ORTHO05D000037 6.2e-11 71.2 93 40.9
PSO675G1246 Papaver somniferum HOM05D000034 ORTHO05D000037 6.2e-11 71.2 93 40.9
PSO782G3468 Papaver somniferum HOM05D000034 ORTHO05D000037 6.2e-11 71.2 93 40.9
SHI19211 Sapria himalayana HOM05D000034 ORTHO05D000037 6.2e-11 71.2 40 77.5
PSO210G0503 Papaver somniferum HOM05D000034 ORTHO05D000037 1.1e-10 70.5 92 41.3
HanXRQChr07g0185941 Helianthus annuus HOM05D000034 ORTHO05D000037 1.4e-10 70.1 78 47.4
PSO170G6726 Papaver somniferum HOM05D000034 ORTHO05D000037 1.4e-10 70.1 93 40.9
PSO210G7822 Papaver somniferum HOM05D000034 ORTHO05D000037 1.4e-10 70.1 93 40.9
SHI02034 Sapria himalayana HOM05D000034 ORTHO05D000037 1.4e-10 70.1 102 38.2
HanXRQChr12g0382961 Helianthus annuus HOM05D000034 ORTHO05D000037 1.8e-10 69.7 79 46.8
PSO210G2784 Papaver somniferum HOM05D000034 ORTHO05D000037 1.8e-10 69.7 93 40.9
SHI25914 Sapria himalayana HOM05D000034 ORTHO05D000037 1.8e-10 69.7 40 80.0
SHI29524 Sapria himalayana HOM05D000034 ORTHO05D000037 2.3e-10 69.3 72 52.8
SHI43773 Sapria himalayana HOM05D000034 ORTHO05D000037 2.3e-10 69.3 39 74.4
SHI27895 Sapria himalayana HOM05D000034 ORTHO05D000037 3.1e-10 68.9 40 75.0
PSO782G5697 Papaver somniferum HOM05D000034 ORTHO05D000037 4.0e-10 68.6 93 39.8
SHI19427 Sapria himalayana HOM05D000034 ORTHO05D000037 4.0e-10 68.6 40 77.5
PSO017G3185 Papaver somniferum HOM05D000034 ORTHO05D000037 6.8e-10 67.8 93 39.8
SHI05281 Sapria himalayana HOM05D000034 ORTHO05D000037 6.8e-10 67.8 39 76.9
SHI01772 Sapria himalayana HOM05D000034 ORTHO05D000037 8.9e-10 67.4 93 34.4
PSO210G7101 Papaver somniferum HOM05D000034 ORTHO05D000037 1.2e-09 67.0 93 38.7
SHI20365 Sapria himalayana HOM05D000034 ORTHO05D000037 1.2e-09 67.0 40 75.0
SHI19715 Sapria himalayana HOM05D000034 ORTHO05D000037 1.5e-09 66.6 40 72.5
Aqoxy7G01723 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 2.0e-09 66.2 83 44.6
Rhsim01G0138000 Rhododendron simsii HOM05D000034 ORTHO05D000037 2.0e-09 66.2 75 48.0
RhsimUnG0061200 Rhododendron simsii HOM05D000034 ORTHO05D000037 2.0e-09 66.2 75 48.0
SHI20928 Sapria himalayana HOM05D000034 ORTHO05D000037 2.0e-09 66.2 74 47.3
SHI31185 Sapria himalayana HOM05D000034 ORTHO05D000037 2.0e-09 66.2 80 43.8
SHI32230 Sapria himalayana HOM05D000034 ORTHO05D000037 2.0e-09 66.2 37 75.7
TAR049G0003 Trochodendron aralioides HOM05D000034 ORTHO05D000037 2.0e-09 66.2 93 39.8
SHI33942 Sapria himalayana HOM05D000034 ORTHO05D000037 2.6e-09 65.9 39 69.2
SHI12314 Sapria himalayana HOM05D000034 ORTHO05D000037 3.4e-09 65.5 36 77.8
Aqoxy4G01816 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 4.4e-09 65.1 82 41.5
PSO561G0039 Papaver somniferum HOM05D000034 ORTHO05D000037 7.5e-09 64.3 93 38.7
ECA232G0123 Erigeron canadensis HOM05D000034 ORTHO05D000037 9.9e-09 63.9 80 46.2
SHI17513 Sapria himalayana HOM05D000034 ORTHO05D000037 9.9e-09 63.9 40 70.0
SHI23192 Sapria himalayana HOM05D000034 ORTHO05D000037 1.3e-08 63.5 39 74.4
CANSAT21G2255 Cannabis sativa HOM05D000034 ORTHO05D000037 1.7e-08 63.2 79 43.0
PSO339G0656 Papaver somniferum HOM05D000034 ORTHO05D000037 1.7e-08 63.2 93 38.7
SHI03909 Sapria himalayana HOM05D000034 ORTHO05D000037 1.7e-08 63.2 53 60.4
CANSAT54G1366 Cannabis sativa HOM05D000034 ORTHO05D000285 2.2e-08 62.8 79 43.0
MBI05_g23048_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 2.9e-08 62.4 95 38.9
MBI12_g00584_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000140 2.9e-08 62.4 82 40.2
SHI16926 Sapria himalayana HOM05D000034 ORTHO05D000037 2.9e-08 62.4 82 37.8
Atru.chr13.1521 Acer truncatum HOM05D000034 ORTHO05D000037 4.9e-08 61.6 82 41.5
Atru.chr8.769 Acer truncatum HOM05D000034 ORTHO05D000037 4.9e-08 61.6 94 38.3
Aqoxy2G01340 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 4.9e-08 61.6 80 40.0
SHI01182 Sapria himalayana HOM05D000034 ORTHO05D000037 4.9e-08 61.6 93 34.4
Aqoxy4G01435 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 6.4e-08 61.2 94 38.3
Atru.chr2.1460 Acer truncatum HOM05D000034 ORTHO05D000037 1.1e-07 60.5 82 40.2
BcaB01g00914 Brassica carinata HOM05D000034 ORTHO05D000037 1.1e-07 60.5 82 37.8
MBI16_g10437_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 1.1e-07 60.5 96 39.6
MBI16_g45899_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 1.1e-07 60.5 76 39.5
SHI20142 Sapria himalayana HOM05D000034 ORTHO05D000037 1.1e-07 60.5 42 61.9
AL8G20770 Arabidopsis lyrata HOM05D000034 ORTHO05D000037 1.4e-07 60.1 93 32.3
SHI13254 Sapria himalayana HOM05D000034 ORTHO05D037517 1.4e-07 60.1 66 50.0
Atru.chr1.2138 Acer truncatum HOM05D000034 ORTHO05D000037 1.9e-07 59.7 82 39.0
Atru.chr2.3567 Acer truncatum HOM05D000034 ORTHO05D000037 1.9e-07 59.7 82 40.2
Atru.chr5.2050 Acer truncatum HOM05D000034 ORTHO05D000037 1.9e-07 59.7 82 40.2
Aqoxy3G02330 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 1.9e-07 59.7 82 36.6
Aqoxy7G02664 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 2.4e-07 59.3 93 37.6
FvH4_2g04530 Fragaria vesca HOM05D000034 ORTHO05D000037 3.2e-07 58.9 95 36.8
FvH4_2g11121 Fragaria vesca HOM05D000034 ORTHO05D000037 3.2e-07 58.9 95 36.8
SHI02706 Sapria himalayana HOM05D000034 ORTHO05D000037 3.2e-07 58.9 70 48.6
TWI60G0087 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 3.2e-07 58.9 104 35.6
TWI09G1472 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 4.1e-07 58.5 108 36.1
TAR555G0001 Trochodendron aralioides HOM05D000034 ORTHO05D000037 4.1e-07 58.5 85 40.0
Atru.chr5.1943 Acer truncatum HOM05D000034 ORTHO05D000037 5.4e-07 58.2 81 40.7
FvH4_1g10461 Fragaria vesca HOM05D000034 ORTHO05D000037 5.4e-07 58.2 116 32.8
TPR.G29800 Trifolium pratense HOM05D000034 ORTHO05D000037 5.4e-07 58.2 82 37.8
MBI01_g42393_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 7.1e-07 57.8 78 41.0
MBI05_g29692_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 7.1e-07 57.8 77 40.3
Atru.chr11.923 Acer truncatum HOM05D000034 ORTHO05D000037 9.2e-07 57.4 94 36.2
ECA246G3575 Erigeron canadensis HOM05D001106 ORTHO05D000037 9.2e-07 57.4 110 34.5
MBI12_g20262_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 9.2e-07 57.4 78 39.7
SHI22347 Sapria himalayana HOM05D000034 ORTHO05D000037 9.2e-07 57.4 89 34.8
Atru.chr7.11 Acer truncatum HOM05D000034 ORTHO05D000037 1.6e-06 56.6 96 34.4
TPR.G11067 Trifolium pratense HOM05D000034 ORTHO05D000037 1.6e-06 56.6 82 37.8
TAR078G0003 Trochodendron aralioides HOM05D000034 ORTHO05D000037 1.6e-06 56.6 112 32.1
Aqoxy2G02168 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 2.1e-06 56.2 98 36.7
FvH4_3g29911 Fragaria vesca HOM05D000034 ORTHO05D000037 2.1e-06 56.2 116 31.9
Lj2P433T6 Lonicera japonica HOM05D000034 ORTHO05D000037 2.1e-06 56.2 82 37.8
Lj4C317T2 Lonicera japonica HOM05D000034 ORTHO05D001698 2.1e-06 56.2 82 37.8
TWI12G0430 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 2.1e-06 56.2 78 41.0
FvH4_4g17331 Fragaria vesca HOM05D000034 ORTHO05D000037 2.7e-06 55.8 94 35.1
Lju470C3T13 Lonicera japonica HOM05D000034 ORTHO05D000037 2.7e-06 55.8 113 33.6
MBI09_g08429_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 2.7e-06 55.8 116 31.0
MBI16_g14986_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 2.7e-06 55.8 75 44.0
Oeu052246.1 Olea europaea HOM05D000034 ORTHO05D000037 2.7e-06 55.8 94 37.2
arahy.Tifrunner.gnm1.ann1.U05UVI Arachis hypogaea HOM05D000034 ORTHO05D000037 3.5e-06 55.5 76 34.2
FvH4_2g13361 Fragaria vesca HOM05D000034 ORTHO05D000037 3.5e-06 55.5 116 31.9
Lj2g0028060 Lotus japonicus HOM05D000034 ORTHO05D000037 3.5e-06 55.5 83 38.6
Lj3g0017061 Lotus japonicus HOM05D000034 ORTHO05D000037 3.5e-06 55.5 83 38.6
LjContig00272g0009285 Lotus japonicus HOM05D000034 ORTHO05D000037 3.5e-06 55.5 83 38.6
MBI15_g03056_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 3.5e-06 55.5 78 39.7
Atru.chr3.2504 Acer truncatum HOM05D000034 ORTHO05D000037 4.6e-06 55.1 82 36.6
Lj5P793T12 Lonicera japonica HOM05D000034 ORTHO05D000037 4.6e-06 55.1 82 36.6
Lj3g0012091 Lotus japonicus HOM05D000034 ORTHO05D000037 4.6e-06 55.1 78 41.0
MBI18_g28052_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 4.6e-06 55.1 76 40.8
PSO541G0261 Papaver somniferum HOM05D000034 ORTHO05D000037 4.6e-06 55.1 90 35.6
TWI23G0160 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 4.6e-06 55.1 104 34.6
TWI31G1184 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 4.6e-06 55.1 81 39.5
TWI32G1210 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 4.6e-06 55.1 81 39.5
TWI34G1702 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 4.6e-06 55.1 104 34.6
TWI53G0605 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 4.6e-06 55.1 104 34.6
TWI73G1226 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 4.6e-06 55.1 78 41.0
TWI74G1293 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 4.6e-06 55.1 78 41.0
arahy.Tifrunner.gnm1.ann1.TEB0R7 Arachis hypogaea HOM05D000034 ORTHO05D000037 6.0e-06 54.7 79 36.7
arahy.Tifrunner.gnm1.ann1.Z5ZQ3Q Arachis hypogaea HOM05D000034 ORTHO05D000037 6.0e-06 54.7 79 36.7
AUR62009858 Chenopodium quinoa HOM05D000034 ORTHO05D000037 6.0e-06 54.7 94 34.0
AUR62020810 Chenopodium quinoa HOM05D000034 ORTHO05D000037 6.0e-06 54.7 94 34.0
Lj3g0012180 Lotus japonicus HOM05D000034 ORTHO05D000037 6.0e-06 54.7 78 41.0
MBI10_g20855_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 6.0e-06 54.7 74 41.9
MBI17_g21965_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 6.0e-06 54.7 79 38.0
MBI19_g00241_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 6.0e-06 54.7 77 42.9
SHI10898 Sapria himalayana HOM05D000034 ORTHO05D000037 6.0e-06 54.7 65 44.6
TWI38G2340 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 6.0e-06 54.7 104 34.6
Aqoxy1G03317 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 7.8e-06 54.3 77 40.3
arahy.Tifrunner.gnm1.ann1.D4V5SR Arachis hypogaea HOM05D000034 ORTHO05D000037 7.8e-06 54.3 84 39.3
CSS0001254 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 7.8e-06 54.3 79 39.2
MBI19_g18847_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 7.8e-06 54.3 79 38.0
TWI23G0109 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 7.8e-06 54.3 81 40.7
TWI38G0294 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 7.8e-06 54.3 78 39.7
TWI53G0204 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 7.8e-06 54.3 81 39.5


User provided reference genes

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