Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI07101 Sapria himalayana HOM05D000002 ORTHO05D000001 2.0e-46 188.7 94 100.0
Manes.13G106550 Manihot esculenta HOM05D000002 ORTHO05D000001 8.7e-18 93.6 84 58.3
CSS0008175 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.9e-17 92.4 84 61.9
Sopen11g022020 Solanum pennellii HOM05D000002 ORTHO05D000001 1.9e-17 92.4 84 57.1
Sopen01g017420 Solanum pennellii HOM05D000002 ORTHO05D000001 9.7e-17 90.1 84 59.5
Sopen05g010950 Solanum pennellii HOM05D000002 ORTHO05D000001 9.7e-17 90.1 84 59.5
Sopen05g018370 Solanum pennellii HOM05D000002 ORTHO05D000001 9.7e-17 90.1 84 59.5
Sopen06g017010 Solanum pennellii HOM05D000002 ORTHO05D000001 9.7e-17 90.1 84 59.5
Nn1g02756 Nelumbo nucifera HOM05D000002 ORTHO05D000001 1.6e-16 89.4 84 54.8
Sopen05g010210 Solanum pennellii HOM05D000002 ORTHO05D000001 1.6e-16 89.4 84 56.0
Sopen10g016240 Solanum pennellii HOM05D000002 ORTHO05D000001 1.6e-16 89.4 84 56.0
Sopen10g031560 Solanum pennellii HOM05D000002 ORTHO05D000001 1.6e-16 89.4 84 56.0
Sopen11g010630 Solanum pennellii HOM05D000002 ORTHO05D000001 1.6e-16 89.4 84 56.0
Hma1.2p1_0171F.1_g075850 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 4.1e-15 84.7 84 51.2
Sopen03g025100 Solanum pennellii HOM05D000002 ORTHO05D000001 3.4e-14 81.6 85 54.1
CANSAT01G2627 Cannabis sativa HOM05D000002 ORTHO05D000001 2.9e-13 78.6 85 52.9
RcHm_v2.0_Chr1g0330731 Rosa chinensis HOM05D000002 ORTHO05D000001 2.9e-13 78.6 86 50.0
RcHm_v2.0_Chr7g0237911 Rosa chinensis HOM05D000002 ORTHO05D000001 2.9e-13 78.6 86 50.0
Sopen01g009150 Solanum pennellii HOM05D000002 ORTHO05D000001 2.9e-13 78.6 85 52.9
CAN.G592.1 Capsicum annuum HOM05D000002 ORTHO05D000001 5.0e-13 77.8 83 50.6
Nn2g10460 Nelumbo nucifera HOM05D000002 ORTHO05D000001 5.0e-13 77.8 89 51.7
RcHm_v2.0_Chr1g0329831 Rosa chinensis HOM05D000002 ORTHO05D000001 1.4e-12 76.3 92 46.7
Sopen01g022200 Solanum pennellii HOM05D000006 ORTHO05D000001 1.4e-12 76.3 77 57.1
Hma1.2p1_0414F.1_g147800 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.9e-12 75.9 85 52.9
Rhsim09G0033700 Rhododendron simsii HOM05D000002 ORTHO05D000001 2.5e-12 75.5 85 50.6
CSS0016912 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.2e-12 75.1 85 49.4
Rhsim03G0172600 Rhododendron simsii HOM05D000002 ORTHO05D000001 3.2e-12 75.1 85 50.6
CSS0001757 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.2e-12 74.7 85 48.2
CSS0040555 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.2e-12 74.7 85 43.5
CSS0035821 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.5e-12 74.3 90 48.9
CSS0046072 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.5e-12 74.3 85 48.2
Rhsim01G0080600 Rhododendron simsii HOM05D000002 ORTHO05D000001 1.2e-11 73.2 85 47.1
CSS0045643 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.7e-11 72.0 85 49.4
CSS0005727 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.6e-11 71.6 85 48.2
Nn1g06669 Nelumbo nucifera HOM05D000002 ORTHO05D000001 4.6e-11 71.2 85 42.4
Hma1.2p1_2049F.1_g312480 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 6.1e-11 70.9 87 43.7
Sopen08g006700 Solanum pennellii HOM05D000002 ORTHO05D000001 7.9e-11 70.5 73 52.1
Sopen12g010580 Solanum pennellii HOM05D000014 ORTHO05D000093 7.9e-11 70.5 72 56.9
MD01G1101100 Malus domestica HOM05D000002 ORTHO05D000001 1.4e-10 69.7 86 41.9
CSS0033135 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.3e-10 68.9 85 43.5
CSS0035415 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.0e-10 68.6 85 45.9
CSS0039281 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.9e-10 68.2 85 45.9
Nn6g34560 Nelumbo nucifera HOM05D000002 ORTHO05D000001 5.1e-10 67.8 84 45.2
Nn6g34561 Nelumbo nucifera HOM05D000002 ORTHO05D000001 5.1e-10 67.8 84 45.2
CSS0042438 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.1e-09 66.6 92 44.6
Nn7g37205 Nelumbo nucifera HOM05D000002 ORTHO05D000001 1.1e-09 66.6 87 42.5
FvH4_6g43842 Fragaria vesca HOM05D000002 ORTHO05D000001 2.0e-09 65.9 89 46.1
CSS0023125 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.5e-09 65.5 77 48.1
CSS0040082 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.3e-09 64.7 76 51.3
SHI52580 Sapria himalayana HOM05D000002 ORTHO05D000001 4.3e-09 64.7 86 40.7
SHI53128 Sapria himalayana HOM05D000002 ORTHO05D000001 4.3e-09 64.7 86 40.7
CSS0032896 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.4e-09 63.9 85 41.2
FvH4_1g02351 Fragaria vesca HOM05D000002 ORTHO05D000001 7.4e-09 63.9 87 36.8
Hma1.2p1_0764F.1_g215020 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 7.4e-09 63.9 83 41.0
RcHm_v2.0_Chr4g0409151 Rosa chinensis HOM05D000002 ORTHO05D000001 7.4e-09 63.9 88 38.6
CSS0032835 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 9.7e-09 63.5 79 49.4
CSS0011358 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.3e-08 63.2 85 47.1
SHI05323 Sapria himalayana HOM05D000002 ORTHO05D000001 1.3e-08 63.2 86 36.0
SHI07165 Sapria himalayana HOM05D000002 ORTHO05D000001 1.7e-08 62.8 85 45.9
CSS0024331 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.2e-08 62.4 76 50.0
Hma1.2p1_0990F.1_g244900 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.2e-08 62.4 83 45.8
MD02G1295200 Malus domestica HOM05D000002 ORTHO05D000001 2.2e-08 62.4 87 39.1
CSS0002225 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.8e-08 62.0 87 39.1
CSS0015647 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.8e-08 62.0 87 39.1
CSS0027984 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.8e-08 62.0 87 39.1
Ca_03736_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 3.7e-08 61.6 85 37.6
ECA232G1143 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.7e-08 61.6 91 38.5
SHI03433 Sapria himalayana HOM05D000002 ORTHO05D000001 3.7e-08 61.6 85 45.9
Nn5g30083 Nelumbo nucifera HOM05D000002 ORTHO05D000001 6.3e-08 60.8 87 41.4
Gohir.A01G219850 Gossypium hirsutum HOM05D000002 ORTHO05D000001 8.2e-08 60.5 69 52.2
TAR156G0002 Trochodendron aralioides HOM05D000002 ORTHO05D000001 8.2e-08 60.5 87 40.2
SHI19032 Sapria himalayana HOM05D001972 ORTHO05D002555 1.1e-07 60.1 85 44.7
Sopen09g007480 Solanum pennellii HOM05D000002 ORTHO05D000001 1.1e-07 60.1 67 50.7
Sopen09g023360 Solanum pennellii HOM05D000002 ORTHO05D000001 1.1e-07 60.1 66 47.0
Sopen11g010290 Solanum pennellii HOM05D000002 ORTHO05D000001 1.1e-07 60.1 87 37.9
CSS0017873 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.4e-07 59.7 87 35.6
CSS0045725 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.4e-07 59.7 85 42.4
Hma1.2p1_0176F.1_g077340 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.4e-07 59.7 81 42.0
Hma1.2p1_0279F.1_g112030 Hydrangea macrophylla HOM05D000006 ORTHO05D000001 1.4e-07 59.7 87 47.1
RcHm_v2.0_Chr7g0198271 Rosa chinensis HOM05D000002 ORTHO05D000001 1.4e-07 59.7 91 34.1
Nn1g02421 Nelumbo nucifera HOM05D000002 ORTHO05D000001 1.8e-07 59.3 87 39.1
Sopen01g013480 Solanum pennellii HOM05D000002 ORTHO05D000001 1.8e-07 59.3 76 47.4
CSS0047919 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.4e-07 58.9 87 37.9
Ca_21025_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 2.4e-07 58.9 85 36.5
Ca_23646_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 2.4e-07 58.9 85 34.1
Ca_19090_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 3.1e-07 58.5 77 39.0
Hma1.2p1_1498F.1_g287120 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 3.1e-07 58.5 91 34.1
SHI03363 Sapria himalayana HOM05D000002 ORTHO05D000001 3.1e-07 58.5 88 43.2
CSS0017329 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.1e-07 58.2 86 34.9
Ca_19720_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 4.1e-07 58.2 86 34.9
ECA232G0373 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.1e-07 58.2 100 35.0
RcHm_v2.0_Chr2g0154461 Rosa chinensis HOM05D000002 ORTHO05D000001 4.1e-07 58.2 91 34.1
RcHm_v2.0_Chr3g0453691 Rosa chinensis HOM05D000002 ORTHO05D000001 4.1e-07 58.2 91 34.1
Sopen05g024300 Solanum pennellii HOM05D000002 ORTHO05D000001 4.1e-07 58.2 93 38.7
MD11G1074500 Malus domestica HOM05D000002 ORTHO05D000001 5.3e-07 57.8 85 38.8
VMungo1127G0233 Vigna mungo HOM05D000577 ORTHO05D000001 5.3e-07 57.8 83 36.1
CSS0036210 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.9e-07 57.4 91 35.2
Ca_05390_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 6.9e-07 57.4 78 39.7
ECA246G4670 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.9e-07 57.4 100 34.0
Hma1.2p1_1719F.1_g299230 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 6.9e-07 57.4 87 36.8
SHI45012 Sapria himalayana HOM05D000002 ORTHO05D000001 9.1e-07 57.0 85 44.7
CSS0012713 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.2e-06 56.6 85 40.0
ECA234G3983 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.2e-06 56.6 92 38.0
SHI35127 Sapria himalayana HOM05D000002 ORTHO05D000001 1.2e-06 56.6 85 44.7
Sopen07g014860 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-06 56.6 85 38.8
CSS0012492 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.5e-06 56.2 88 39.8
CSS0036759 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.5e-06 56.2 81 39.5
Ca_19310_v3 Cicer arietinum L. HOM05D014812 ORTHO05D015605 1.5e-06 56.2 85 36.5
Sopen01g009450 Solanum pennellii HOM05D000002 ORTHO05D000001 1.5e-06 56.2 85 38.8
Sopen01g016120 Solanum pennellii HOM05D000002 ORTHO05D000001 1.5e-06 56.2 85 38.8
Sopen05g007000 Solanum pennellii HOM05D000002 ORTHO05D000001 1.5e-06 56.2 85 38.8
Sopen05g015450 Solanum pennellii HOM05D000002 ORTHO05D000001 1.5e-06 56.2 85 38.8
Sopen10g019480 Solanum pennellii HOM05D000002 ORTHO05D000001 1.5e-06 56.2 85 38.8
Sopen10g024570 Solanum pennellii HOM05D000002 ORTHO05D000001 1.5e-06 56.2 85 38.8
Sopen12g027810 Solanum pennellii HOM05D000002 ORTHO05D000001 1.5e-06 56.2 85 38.8
Ca_26745_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 2.0e-06 55.8 79 35.4
Manes.10G112229 Manihot esculenta HOM05D000002 ORTHO05D000001 2.0e-06 55.8 55 47.3
Ca_14154_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 2.6e-06 55.5 85 30.6
Hma1.2p1_0774F.1_g216290 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.6e-06 55.5 91 34.1
CSS0018619 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.4e-06 55.1 88 39.8
CSS0036723 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.4e-06 55.1 88 39.8
Ca_28064_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 3.4e-06 55.1 95 34.7
CSS0020078 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.5e-06 54.7 88 39.8
CSS0020427 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.5e-06 54.7 89 39.3
CSS0040919 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.5e-06 54.7 70 47.1
CSS0045881 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.5e-06 54.7 79 39.2
Ca_02487_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 4.5e-06 54.7 82 32.9
Ca_13725_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 4.5e-06 54.7 92 29.3
FvH4_7g13272 Fragaria vesca HOM05D000002 ORTHO05D000001 4.5e-06 54.7 85 35.3
SHI05340 Sapria himalayana HOM05D000002 ORTHO05D000001 4.5e-06 54.7 88 40.9
SHI38274 Sapria himalayana HOM05D000002 ORTHO05D000001 4.5e-06 54.7 85 44.7
MSTRG.2296 Avicennia marina HOM05D000002 ORTHO05D000001 5.9e-06 54.3 85 40.0
CSS0004228 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.9e-06 54.3 89 39.3
Ca_05908_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 5.9e-06 54.3 85 30.6
Ca_14263_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 5.9e-06 54.3 85 35.3
Rhsim08G0049500 Rhododendron simsii HOM05D004871 ORTHO05D005755 5.9e-06 54.3 72 47.2
SEGI_07554 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 5.9e-06 54.3 102 35.3
Sopen10g021210 Solanum pennellii HOM05D000002 ORTHO05D000001 5.9e-06 54.3 85 36.5
CSS0008869 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.7e-06 53.9 82 36.6


User provided reference genes

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