Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI07081 Sapria himalayana HOM05D006267 ORTHO05D007490 1.2e-277 959.1 480 100.0
Manes.02G016400 Manihot esculenta HOM05D006267 ORTHO05D007490 1.8e-50 204.5 478 34.3
MD06G1092500 Malus domestica HOM05D006267 ORTHO05D007490 2.5e-44 184.1 480 31.9
Potri.001G098500 Populus trichocarpa HOM05D006267 ORTHO05D007490 4.3e-44 183.3 478 32.6
Manes.01G056900 Manihot esculenta HOM05D006267 ORTHO05D007490 3.1e-42 177.2 480 32.9
Potri.003G133100 Populus trichocarpa HOM05D006267 ORTHO05D007490 3.1e-42 177.2 484 32.6
Sabra03G0095400 Salix brachista HOM05D006267 ORTHO05D007490 5.2e-42 176.4 484 32.6
Duzib084G0031 Durio zibethinus HOM05D006267 ORTHO05D007490 1.2e-41 175.3 480 32.5
Prupe.5G107200 Prunus persica HOM05D006267 ORTHO05D007490 1.5e-41 174.9 481 32.2
Glyma.08G018700 Glycine max HOM05D006267 ORTHO05D007490 2.2e-40 171.0 479 32.2
Glyma.05G212200 Glycine max HOM05D006267 ORTHO05D007490 4.9e-40 169.9 478 31.6
FvH4_5g03290 Fragaria vesca HOM05D006267 ORTHO05D007490 6.4e-40 169.5 482 29.9
Thecc.03G287200 Theobroma cacao HOM05D006267 ORTHO05D007490 1.4e-39 168.3 483 31.9
FAN18G3550 Fragaria x ananassa HOM05D006267 ORTHO05D007490 2.4e-39 167.5 482 30.1
Sabra01G0073800 Salix brachista HOM05D006267 ORTHO05D007490 2.4e-39 167.5 442 32.4
FAN04G2714 Fragaria x ananassa HOM05D006267 ORTHO05D007490 3.2e-39 167.2 482 30.1
FAN04G3088 Fragaria x ananassa HOM05D006267 ORTHO05D007490 3.2e-39 167.2 485 29.9
Lj4g0011337 Lotus japonicus HOM05D006267 ORTHO05D007490 3.2e-39 167.2 480 31.0
MD14G1113000 Malus domestica HOM05D006267 ORTHO05D007490 4.1e-39 166.8 483 29.4
RcHm_v2.0_Chr7g0196491 Rosa chinensis HOM05D006267 ORTHO05D007490 2.1e-38 164.5 482 29.9
FAN08G1104 Fragaria x ananassa HOM05D006267 ORTHO05D007490 2.7e-38 164.1 484 29.5
GSVIVG01019426001 Vitis vinifera HOM05D006267 ORTHO05D007490 3.5e-38 163.7 248 40.3
FAN13G1859 Fragaria x ananassa HOM05D006267 ORTHO05D007490 6.0e-38 162.9 484 29.8
COL.COLO4_08352 Corchorus olitorius HOM05D006267 ORTHO05D007490 7.8e-38 162.5 481 31.8
Eucgr.E00783 Eucalyptus grandis HOM05D006267 ORTHO05D007490 2.3e-37 161.0 451 31.0
Dinv37589 Davidia involucrata HOM05D006267 ORTHO05D007490 3.9e-37 160.2 452 32.3
Atru.chr9.2105 Acer truncatum HOM05D006267 ORTHO05D007490 1.9e-36 157.9 489 29.9
FAN13G1356 Fragaria x ananassa HOM05D006267 ORTHO05D007490 7.3e-36 156.0 482 29.5
Dinv38895 Davidia involucrata HOM05D006267 ORTHO05D007490 1.2e-35 155.2 486 31.1
TPR.G12935 Trifolium pratense HOM05D006267 ORTHO05D007490 1.6e-35 154.8 490 28.8
Cfa012253 Carpinus fangiana HOM05D006267 ORTHO05D007490 2.1e-35 154.5 481 31.2
Ca_10954_v3 Cicer arietinum L. HOM05D006267 ORTHO05D007490 2.8e-35 154.1 483 30.0
CSS0029775 Camellia sinensis var. sinensis HOM05D006267 ORTHO05D007490 1.4e-34 151.8 485 30.7
Medtr8g098995 Medicago truncatula HOM05D006267 ORTHO05D007490 1.4e-34 151.8 483 30.6
TWI60G1512 Tripterygium wilfordii HOM05D006267 ORTHO05D007490 5.2e-34 149.8 484 30.0
CANSAT21G1484 Cannabis sativa HOM05D006267 ORTHO05D007490 6.8e-34 149.4 248 37.1
Psat7g029320 Pisum sativum HOM05D006267 ORTHO05D007490 6.8e-34 149.4 246 38.2
Actinidia27358 Actinidia chinensis HOM05D006267 ORTHO05D007490 1.5e-33 148.3 451 29.9
Cpa.g.sc201.8 Carica papaya HOM05D006267 ORTHO05D007490 1.5e-33 148.3 450 30.7
CiPaw.12G088700 Carya illinoinensis HOM05D006267 ORTHO05D007490 2.0e-33 147.9 411 31.1
Actinidia33723 Actinidia chinensis HOM05D006267 ORTHO05D007490 5.8e-33 146.4 448 31.2
TWI15G0222 Tripterygium wilfordii HOM05D006267 ORTHO05D007490 7.6e-33 146.0 486 28.6
Lalb_Chr05g0224451 Lupinus albus HOM05D006267 ORTHO05D007490 9.9e-33 145.6 477 28.9
arahy.Tifrunner.gnm1.ann1.BRCM5A Arachis hypogaea HOM05D006267 ORTHO05D007490 3.8e-32 143.7 482 30.5
arahy.Tifrunner.gnm1.ann1.SWZD22 Arachis hypogaea HOM05D006267 ORTHO05D007490 4.9e-32 143.3 482 30.5
Lalb_Chr09g0333071 Lupinus albus HOM05D006267 ORTHO05D007490 6.4e-32 142.9 481 28.5
Phvul.002G293500 Phaseolus vulgaris HOM05D006267 ORTHO05D007490 1.1e-31 142.1 475 29.1
THA.LOC104817764 Tarenaya hassleriana HOM05D006267 ORTHO05D007490 1.1e-31 142.1 258 37.6
TAR375G0718 Trochodendron aralioides HOM05D006267 ORTHO05D007490 1.1e-31 142.1 522 28.5
Gohir.D11G022800 Gossypium hirsutum HOM05D006267 ORTHO05D007490 4.2e-31 140.2 479 27.6
VMungo0251G1048 Vigna mungo HOM05D006267 ORTHO05D007490 4.2e-31 140.2 481 28.9
Gorai.007G024600 Gossypium raimondii HOM05D006267 ORTHO05D007490 7.1e-31 139.4 479 27.8
Gohir.A11G023100 Gossypium hirsutum HOM05D006267 ORTHO05D007490 1.2e-30 138.7 479 29.0
QL02p033236 Quercus lobata HOM05D006267 ORTHO05D007490 1.6e-30 138.3 482 28.0
AUR62010761 Chenopodium quinoa HOM05D006267 ORTHO05D007490 2.1e-30 137.9 417 28.3
Ciclev10019222m.g Citrus clementina HOM05D006267 ORTHO05D007490 2.7e-30 137.5 471 30.8
AT1G64050 Arabidopsis thaliana HOM05D006267 ORTHO05D007490 1.0e-29 135.6 438 29.0
AUR62019762 Chenopodium quinoa HOM05D006267 ORTHO05D007490 1.0e-29 135.6 248 34.3
VMungo1215G1298 Vigna mungo HOM05D006267 ORTHO05D007490 1.0e-29 135.6 450 27.6
Sc01g0009910 Simmondsia chinensis HOM05D006267 ORTHO05D007490 2.3e-29 134.4 399 29.1
TAR629G1352 Trochodendron aralioides HOM05D006267 ORTHO05D007490 2.3e-29 134.4 298 33.6
Rhsim07G0086900 Rhododendron simsii HOM05D006267 ORTHO05D007490 8.7e-29 132.5 288 35.8
Carub.0002s0075 Capsella rubella HOM05D006267 ORTHO05D007490 1.9e-28 131.3 415 28.7
Sed0011828 Sechium edule HOM05D006267 ORTHO05D007490 3.3e-28 130.6 249 36.5
Lj2A177G41 Lonicera japonica HOM05D006267 ORTHO05D007490 4.3e-28 130.2 416 29.6
ClCG07G007820 Citrullus lanatus HOM05D006267 ORTHO05D007490 5.6e-28 129.8 248 35.5
TAR374G1011 Trochodendron aralioides HOM05D006267 ORTHO05D007490 5.6e-28 129.8 523 29.4
Hma1.2p1_0216F.1_g091140 Hydrangea macrophylla HOM05D006267 ORTHO05D007490 1.6e-27 128.3 482 28.0
Nn1g01698 Nelumbo nucifera HOM05D006267 ORTHO05D007490 1.6e-27 128.3 473 30.4
Phvul.002G160500 Phaseolus vulgaris HOM05D006267 ORTHO05D007490 6.2e-27 126.3 458 27.5
CARHR046900 Cardamine hirsuta HOM05D006267 ORTHO05D007490 8.1e-27 125.9 442 27.6
Sp2g00660 Schrenkiella parvula HOM05D006267 ORTHO05D007490 2.4e-26 124.4 441 26.8
Cc08_g15330 Coffea canephora HOM05D006267 ORTHO05D007490 3.1e-26 124.0 243 34.2
TWI81G0535 Tripterygium wilfordii HOM05D006267 ORTHO05D007490 3.1e-26 124.0 467 27.6
AL2G11010 Arabidopsis lyrata HOM05D006267 ORTHO05D007490 4.0e-26 123.6 441 28.8
MBI04_g06288_MAGBIO Magnolia biondii HOM05D006267 ORTHO05D007490 5.3e-26 123.2 224 35.3
Hund11430 Selenicereus undatus HOM05D006267 ORTHO05D007490 4.4e-25 120.2 473 27.1
Migut.E01211 Erythranthe guttata HOM05D006267 ORTHO05D007490 5.8e-25 119.8 247 34.0
CsaV3_4G006140 Cucumis sativus L. HOM05D006267 ORTHO05D007490 1.3e-24 118.6 489 27.2
Thhalv10023327m.g Eutrema salsugineum HOM05D006267 ORTHO05D007490 2.2e-24 117.9 410 26.6
BcaB07g31428 Brassica carinata HOM05D006267 ORTHO05D007490 1.4e-23 115.2 441 27.9
MSTRG.1836 Avicennia marina HOM05D006267 ORTHO05D007490 4.2e-23 113.6 257 34.6
BolC9t54717H Brassica oleracea HOM05D006267 ORTHO05D007490 2.1e-22 111.3 441 27.2
A09p15090 Brassica napus HOM05D006267 ORTHO05D007490 2.7e-22 110.9 442 27.4
MSTRG.13864 Avicennia marina HOM05D006267 ORTHO05D007490 3.5e-22 110.5 279 30.5
Lsat_1_v5_gn_3_11600 Lactuca sativa HOM05D006267 ORTHO05D007490 3.5e-22 110.5 248 32.3
EL10Ac5g12844 Beta vulgaris HOM05D006267 ORTHO05D007490 4.6e-22 110.2 251 32.7
Sed0002932 Sechium edule HOM05D006267 ORTHO05D007490 7.9e-22 109.4 295 31.9
BraA09t37153Z Brassica rapa HOM05D006267 ORTHO05D007490 1.7e-21 108.2 442 27.4
BcaC04g22526 Brassica carinata HOM05D006267 ORTHO05D007490 3.0e-21 107.5 441 26.8
Aa31LG2G1120 Aethionema arabicum HOM05D006267 ORTHO05D007490 6.6e-21 106.3 299 29.8
Aqoxy7G00177 Aquilegia oxysepala HOM05D006267 ORTHO05D007490 8.7e-21 105.9 465 27.1
C09p18210 Brassica napus HOM05D006267 ORTHO05D007490 8.7e-21 105.9 441 26.8
PGR042G1146 Punica granatum HOM05D006267 ORTHO05D007490 3.3e-20 104.0 248 31.0
MELO3C016335.2 Cucumis melo HOM05D006267 ORTHO05D007490 5.6e-20 103.2 251 31.9
vmacro13979 Vaccinium macrocarpon HOM05D006267 ORTHO05D007490 7.4e-20 102.8 477 27.9
Nitab4.5_0002381g0070 Nicotiana tabacum HOM05D006267 ORTHO05D007490 1.6e-19 101.7 250 32.8
ECA246G3109 Erigeron canadensis HOM05D006267 ORTHO05D007490 4.8e-19 100.1 481 25.6
Peaxi162Scf00117g01519 Petunia axillaris HOM05D006267 ORTHO05D007490 4.8e-19 100.1 248 30.2
Hund14261 Selenicereus undatus HOM05D006267 ORTHO05D007490 4.8e-19 100.1 456 25.7
DCAR_005575 Daucus carota HOM05D006267 ORTHO05D007490 8.1e-19 99.4 251 32.7
HanXRQChr17g0533871 Helianthus annuus HOM05D006267 ORTHO05D007490 8.1e-19 99.4 465 26.0
Duzib205G1874 Durio zibethinus HOM05D006267 ORTHO05D007490 1.1e-18 99.0 246 31.3
Duzib068G0865 Durio zibethinus HOM05D006267 ORTHO05D007490 6.9e-18 96.3 177 37.9
Haze_08744 Corylus avellana HOM05D006267 ORTHO05D007490 4.5e-17 93.6 376 28.2
PGSC0003DMG400004984 Solanum tuberosum HOM05D006267 ORTHO05D007490 5.8e-17 93.2 265 30.6
Solyc12g056170.2 Solanum lycopersicum HOM05D006267 ORTHO05D007490 1.4e-15 88.6 224 31.2
Sopen12g028680 Solanum pennellii HOM05D006267 ORTHO05D007490 1.9e-15 88.2 220 32.3
unitig_52.g17233 Utricularia gibba HOM05D006267 ORTHO05D007490 1.2e-14 85.5 303 27.7
Nitab4.5_0003366g0020 Nicotiana tabacum HOM05D006267 ORTHO05D007490 2.7e-14 84.3 245 29.8
PSO170G4156 Papaver somniferum HOM05D006267 ORTHO05D007490 3.5e-14 84.0 473 27.3
PSO063G3925 Papaver somniferum HOM05D006267 ORTHO05D007490 5.1e-13 80.1 471 27.4
ATR0188G022 Amborella trichopoda HOM05D006267 ORTHO05D007490 9.0e-10 69.3 217 26.3
Zm00001eb237760 Zea mays HOM05D006267 ORTHO05D007490 7.1e-07 59.7 235 28.5


User provided reference genes

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