Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI07073 Sapria himalayana HOM05D004859 ORTHO05D005807 8.0e-70 266.9 130 100.0
SHI13720 Sapria himalayana HOM05D004859 ORTHO05D005807 3.5e-09 65.5 77 50.6
MD12G1260500 Malus domestica HOM05D004859 ORTHO05D005807 6.0e-09 64.7 77 50.6
Potri.013G086400 Populus trichocarpa HOM05D004859 ORTHO05D005807 7.8e-09 64.3 77 50.6
Ca_07986_v3 Cicer arietinum L. HOM05D004859 ORTHO05D005807 1.0e-08 63.9 77 50.6
Duzib128G0817 Durio zibethinus HOM05D004859 ORTHO05D005807 1.0e-08 63.9 77 49.4
MD04G1244600 Malus domestica HOM05D004859 ORTHO05D005807 1.3e-08 63.5 77 49.4
Cc09_g03620 Coffea canephora HOM05D004859 ORTHO05D005807 2.3e-08 62.8 77 49.4
Manes.13G005600 Manihot esculenta HOM05D004859 ORTHO05D005807 2.3e-08 62.8 77 48.1
Prupe.6G361200 Prunus persica HOM05D004859 ORTHO05D005807 3.9e-08 62.0 77 48.1
Thecc.05G199300 Theobroma cacao HOM05D004859 ORTHO05D005807 5.1e-08 61.6 77 48.1
COL.COLO4_19821 Corchorus olitorius HOM05D004859 ORTHO05D005807 6.6e-08 61.2 77 48.1
Duzib177G0866 Durio zibethinus HOM05D004859 ORTHO05D005807 6.6e-08 61.2 77 46.8
Gohir.A08G225000 Gossypium hirsutum HOM05D004859 ORTHO05D005807 6.6e-08 61.2 77 48.1
Gorai.004G261900 Gossypium raimondii HOM05D004859 ORTHO05D005807 6.6e-08 61.2 77 48.1
MELO3C010059.2 Cucumis melo HOM05D004859 ORTHO05D005807 8.7e-08 60.8 78 46.2
Gohir.D08G245400 Gossypium hirsutum HOM05D004859 ORTHO05D005807 8.7e-08 60.8 77 48.1
Manes.12G005900 Manihot esculenta HOM05D004859 ORTHO05D005807 8.7e-08 60.8 77 46.8
Os06g0708600 Oryza sativa ssp. japonica HOM05D004859 ORTHO05D005807 8.7e-08 60.8 77 49.4
TWI18G1000 Tripterygium wilfordii HOM05D004859 ORTHO05D005807 8.7e-08 60.8 77 48.1
unitig_26.g9580 Utricularia gibba HOM05D000798 ORTHO05D000659 8.7e-08 60.8 77 48.1
CDE12G0839 Ceratophyllum demersum HOM05D004859 ORTHO05D005807 1.1e-07 60.5 77 46.8
Glyma.18G241900 Glycine max HOM05D004859 ORTHO05D005807 1.1e-07 60.5 77 48.1
Phvul.008G054200 Phaseolus vulgaris HOM05D004859 ORTHO05D005807 1.1e-07 60.5 77 48.1
THA.LOC104827174 Tarenaya hassleriana HOM05D004859 ORTHO05D005807 1.1e-07 60.5 77 46.8
Glyma.09G250600 Glycine max HOM05D004859 ORTHO05D005807 1.5e-07 60.1 77 48.1
Oeu062049.1 Olea europaea HOM05D004859 ORTHO05D005807 1.5e-07 60.1 77 49.4
Psat3g138280 Pisum sativum HOM05D004859 ORTHO05D005807 1.5e-07 60.1 77 49.4
Potri.019G053500 Populus trichocarpa HOM05D004859 ORTHO05D005807 1.5e-07 60.1 77 46.8
RcHm_v2.0_Chr3g0447891 Rosa chinensis HOM05D004859 ORTHO05D005807 1.5e-07 60.1 77 45.5
THA.LOC104802953 Tarenaya hassleriana HOM05D004859 ORTHO05D005807 1.5e-07 60.1 77 46.8
BcaC05g30510 Brassica carinata HOM05D004859 ORTHO05D005807 1.9e-07 59.7 77 45.5
C09p75910 Brassica napus HOM05D004859 ORTHO05D005807 1.9e-07 59.7 77 45.5
Lj1g0018632 Lotus japonicus HOM05D004859 ORTHO05D005807 1.9e-07 59.7 77 48.1
Lalb_Chr03g0038491 Lupinus albus HOM05D004859 ORTHO05D005807 1.9e-07 59.7 77 46.8
Sc16g0010390 Simmondsia chinensis HOM05D004859 ORTHO05D005807 1.9e-07 59.7 77 46.8
CANSAT54G1839 Cannabis sativa HOM05D004859 ORTHO05D005807 2.5e-07 59.3 77 46.8
Gohir.A13G154200 Gossypium hirsutum HOM05D004859 ORTHO05D005807 2.5e-07 59.3 77 45.5
Gohir.D13G158900 Gossypium hirsutum HOM05D004859 ORTHO05D005807 2.5e-07 59.3 77 45.5
Gorai.013G179600 Gossypium raimondii HOM05D004859 ORTHO05D005807 2.5e-07 59.3 77 45.5
QL01p048380 Quercus lobata HOM05D004859 ORTHO05D005807 2.5e-07 59.3 77 45.5
TPR.G30708 Trifolium pratense HOM05D004859 ORTHO05D005807 2.5e-07 59.3 77 49.4
ATR0568G125 Amborella trichopoda HOM05D004859 ORTHO05D005807 3.3e-07 58.9 77 48.1
A03p07800 Brassica napus HOM05D004859 ORTHO05D005807 4.3e-07 58.5 78 43.6
CSS0011817 Camellia sinensis var. sinensis HOM05D004859 ORTHO05D005807 4.3e-07 58.5 77 46.8
MBI18_g38869_MAGBIO Magnolia biondii HOM05D004859 ORTHO05D005807 4.3e-07 58.5 77 45.5
Sabra13G0077700 Salix brachista HOM05D004859 ORTHO05D005807 4.3e-07 58.5 77 45.5
Atru.chr12.1788 Acer truncatum HOM05D004859 ORTHO05D005807 5.6e-07 58.2 77 48.1
Gohir.A05G391600 Gossypium hirsutum HOM05D004859 ORTHO05D005807 5.6e-07 58.2 77 45.5
Gohir.D04G025700 Gossypium hirsutum HOM05D004859 ORTHO05D005807 5.6e-07 58.2 77 45.5
Gorai.012G028300 Gossypium raimondii HOM05D004859 ORTHO05D005807 5.6e-07 58.2 77 45.5
Medtr7g079990 Medicago truncatula HOM05D004859 ORTHO05D005807 5.6e-07 58.2 77 48.1
unitig_749.g13492 Utricularia gibba HOM05D004859 ORTHO05D005807 5.6e-07 58.2 77 46.8
Aa31LG5G13260 Aethionema arabicum HOM05D004859 ORTHO05D005807 7.3e-07 57.8 77 45.5
Cpa.g.sc39.7 Carica papaya HOM05D004859 ORTHO05D005807 7.3e-07 57.8 77 46.8
ClCG03G010710 Citrullus lanatus HOM05D004859 ORTHO05D005807 7.3e-07 57.8 77 44.2
ECA238G2179 Erigeron canadensis HOM05D004859 ORTHO05D005807 9.6e-07 57.4 77 42.9
Lalb_Chr01g0020391 Lupinus albus HOM05D004859 ORTHO05D005807 9.6e-07 57.4 77 45.5
Migut.F02136 Erythranthe guttata HOM05D004859 ORTHO05D005807 1.3e-06 57.0 77 46.8
FvH4_6g00510 Fragaria vesca HOM05D004859 ORTHO05D005807 1.3e-06 57.0 77 44.2
FAN05G4796 Fragaria x ananassa HOM05D004859 ORTHO05D005807 1.3e-06 57.0 77 44.2
FAN09G3430 Fragaria x ananassa HOM05D004859 ORTHO05D005807 1.3e-06 57.0 77 44.2
FAN14G1059 Fragaria x ananassa HOM05D004859 ORTHO05D005807 1.3e-06 57.0 77 44.2
Oeu020252.1 Olea europaea HOM05D004859 ORTHO05D005807 1.3e-06 57.0 77 46.8
HPP92_025926 Vanilla planifolia HOM05D004859 ORTHO05D005807 1.3e-06 57.0 77 46.8
BcaB01g04980 Brassica carinata HOM05D004859 ORTHO05D005807 1.6e-06 56.6 77 42.9
BcaC03g18492 Brassica carinata HOM05D004859 ORTHO05D005807 1.6e-06 56.6 77 42.9
A10p22730 Brassica napus HOM05D004859 ORTHO05D005807 1.6e-06 56.6 77 42.9
BolC3t13398H Brassica oleracea HOM05D004859 ORTHO05D005807 1.6e-06 56.6 77 42.9
BraA02t05326Z Brassica rapa HOM05D004859 ORTHO05D005807 1.6e-06 56.6 77 42.9
BraA03t10107Z Brassica rapa HOM05D004859 ORTHO05D005807 1.6e-06 56.6 77 42.9
BraA10t44336Z Brassica rapa HOM05D004859 ORTHO05D005807 1.6e-06 56.6 77 42.9
Eucgr.H01388 Eucalyptus grandis HOM05D004859 ORTHO05D005807 1.6e-06 56.6 77 45.5
BcaB08g36850 Brassica carinata HOM05D004859 ORTHO05D005807 2.1e-06 56.2 77 42.9
BcaC04g18876 Brassica carinata HOM05D004859 ORTHO05D005807 2.1e-06 56.2 77 42.9
C09p60710 Brassica napus HOM05D004859 ORTHO05D005807 2.1e-06 56.2 77 42.9
BolC9t58902H Brassica oleracea HOM05D004859 ORTHO05D005807 2.1e-06 56.2 77 42.9
CANSAT35G0417 Cannabis sativa HOM05D004859 ORTHO05D005807 2.1e-06 56.2 77 46.8
CsaV3_1G044540 Cucumis sativus L. HOM05D004859 ORTHO05D005807 2.1e-06 56.2 77 42.9
Thhalv10015095m.g Eutrema salsugineum HOM05D004859 ORTHO05D005807 2.1e-06 56.2 77 42.9
Lsat_1_v5_gn_8_2360 Lactuca sativa HOM05D004859 ORTHO05D005807 2.1e-06 56.2 77 44.2
PSO675G0300 Papaver somniferum HOM05D004859 ORTHO05D005807 2.1e-06 56.2 77 44.2
PSO675G8596 Papaver somniferum HOM05D004859 ORTHO05D005807 2.1e-06 56.2 77 44.2
SalBow6G1022 Salvia bowleyana HOM05D004859 ORTHO05D005807 2.1e-06 56.2 77 45.5
Sp6g27710 Schrenkiella parvula HOM05D004859 ORTHO05D005807 2.1e-06 56.2 77 42.9
SEGI_19955 Sequoiadendron giganteum HOM05D004859 ORTHO05D005807 2.1e-06 56.2 77 44.2
VMungo1383G1359 Vigna mungo HOM05D004859 ORTHO05D005807 2.1e-06 56.2 77 46.8
A02p03550 Brassica napus HOM05D004859 ORTHO05D005807 2.8e-06 55.8 77 42.9
Cfa006265 Carpinus fangiana HOM05D004859 ORTHO05D005807 2.8e-06 55.8 77 45.5
Haze_04552 Corylus avellana HOM05D004859 ORTHO05D005807 2.8e-06 55.8 77 45.5
HanXRQChr11g0333601 Helianthus annuus HOM05D004859 ORTHO05D005807 2.8e-06 55.8 77 42.9
Nitab4.5_0001435g0020 Nicotiana tabacum HOM05D004859 ORTHO05D005807 2.8e-06 55.8 77 48.1
Rhsim09G0129900 Rhododendron simsii HOM05D004859 ORTHO05D005807 2.8e-06 55.8 77 45.5
Sed0011478 Sechium edule HOM05D004859 ORTHO05D005807 2.8e-06 55.8 77 42.9
TWI36G0708 Tripterygium wilfordii HOM05D004859 ORTHO05D005807 2.8e-06 55.8 77 46.8
Zm00001eb227470 Zea mays HOM05D004859 ORTHO05D005807 2.8e-06 55.8 77 46.8
Actinidia38902 Actinidia chinensis HOM05D004859 ORTHO05D005807 3.6e-06 55.5 77 45.5
Ciclev10013411m.g Citrus clementina HOM05D004859 ORTHO05D005807 3.6e-06 55.5 77 45.5
ECA233G5366 Erigeron canadensis HOM05D004859 ORTHO05D005807 3.6e-06 55.5 76 40.8
Nn7g37400 Nelumbo nucifera HOM05D004859 ORTHO05D005807 3.6e-06 55.5 77 44.2
Sc06g0005050 Simmondsia chinensis HOM05D004859 ORTHO05D005807 3.6e-06 55.5 77 42.9
CARHR196760 Cardamine hirsuta HOM05D004859 ORTHO05D005807 4.8e-06 55.1 77 41.6
Nitab4.5_0000083g0160 Nicotiana tabacum HOM05D004859 ORTHO05D005807 4.8e-06 55.1 77 46.8
DCAR_024584 Daucus carota HOM05D004859 ORTHO05D005807 6.2e-06 54.7 77 42.9
PGR031G2676 Punica granatum HOM05D004859 ORTHO05D005807 6.2e-06 54.7 77 46.8
TAR629G2726 Trochodendron aralioides HOM05D004859 ORTHO05D005807 6.2e-06 54.7 78 41.0
GSVIVG01019111001 Vitis vinifera HOM05D004859 ORTHO05D005807 6.2e-06 54.7 77 44.2
Zm00001eb272650 Zea mays HOM05D004859 ORTHO05D005807 6.2e-06 54.7 77 46.8
BcaC05g30507 Brassica carinata HOM05D004859 ORTHO05D005807 8.1e-06 54.3 77 42.9
CSS0045397 Camellia sinensis var. sinensis HOM05D004859 ORTHO05D005807 8.1e-06 54.3 78 43.6
CARHR076800 Cardamine hirsuta HOM05D004859 ORTHO05D005807 8.1e-06 54.3 77 42.9


User provided reference genes

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