Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI07008 Sapria himalayana HOM05D002129 ORTHO05D002188 3.4e-233 812.0 661 100.0
SHI25813 Sapria himalayana HOM05D007516 ORTHO05D000285 1.8e-32 145.2 235 45.5
Sabra03G0098900 Salix brachista HOM05D002129 ORTHO05D002188 1.6e-25 122.1 176 40.3
Gorai.006G207900 Gossypium raimondii HOM05D002129 ORTHO05D002188 2.6e-23 114.8 183 37.2
arahy.Tifrunner.gnm1.ann1.Q3GPI2 Arachis hypogaea HOM05D002129 ORTHO05D002188 3.4e-23 114.4 172 40.7
MD14G1121500 Malus domestica HOM05D002129 ORTHO05D002188 3.4e-23 114.4 192 39.1
arahy.Tifrunner.gnm1.ann1.DN0YA4 Arachis hypogaea HOM05D002129 ORTHO05D002188 7.5e-23 113.2 172 40.7
Lj4g0008940 Lotus japonicus HOM05D002129 ORTHO05D002188 1.3e-22 112.5 176 40.3
Potri.003G137400 Populus trichocarpa HOM05D002129 ORTHO05D002188 1.3e-22 112.5 171 38.6
Potri.001G094200 Populus trichocarpa HOM05D002129 ORTHO05D002188 2.8e-22 111.3 179 35.8
Manes.02G012600 Manihot esculenta HOM05D002129 ORTHO05D002188 6.3e-22 110.2 167 40.1
Duzib084G0891 Durio zibethinus HOM05D002129 ORTHO05D002188 4.1e-21 107.5 181 36.5
Glyma.05G215100 Glycine max HOM05D002129 ORTHO05D002188 9.2e-21 106.3 188 36.7
QL02p031434 Quercus lobata HOM05D002129 ORTHO05D002188 2.7e-20 104.8 184 35.9
Gohir.D09G185400 Gossypium hirsutum HOM05D002129 ORTHO05D002188 5.9e-20 103.6 175 36.0
Thecc.03G293200 Theobroma cacao HOM05D002129 ORTHO05D002188 5.9e-20 103.6 183 38.3
Duzib068G1418 Durio zibethinus HOM05D002129 ORTHO05D002188 1.0e-19 102.8 175 36.0
Lalb_Chr09g0332631 Lupinus albus HOM05D002129 ORTHO05D002188 1.3e-19 102.4 189 36.0
MD06G1102300 Malus domestica HOM05D002129 ORTHO05D002188 1.3e-19 102.4 184 37.0
Rhsim07G0084000 Rhododendron simsii HOM05D002129 ORTHO05D002188 2.3e-19 101.7 191 36.1
Lalb_Chr16g0390551 Lupinus albus HOM05D002129 ORTHO05D002188 3.8e-19 100.9 176 35.8
Glyma.08G021400 Glycine max HOM05D002129 ORTHO05D002188 8.6e-19 99.8 189 34.4
VMungo0251G1428 Vigna mungo HOM05D002129 ORTHO05D002188 4.3e-18 97.4 176 34.7
Lalb_Chr05g0224241 Lupinus albus HOM05D002129 ORTHO05D002188 1.2e-17 95.9 184 33.7
Manes.01G045900 Manihot esculenta HOM05D002129 ORTHO05D002188 2.8e-17 94.7 177 35.0
Gohir.A09G190800 Gossypium hirsutum HOM05D002129 ORTHO05D002188 3.6e-17 94.4 183 33.3
Prupe.5G115300 Prunus persica HOM05D002129 ORTHO05D002188 3.6e-17 94.4 174 36.8
TWI60G1278 Tripterygium wilfordii HOM05D002129 ORTHO05D002188 2.3e-16 91.7 175 33.7
CiPaw.12G085000 Carya illinoinensis HOM05D002129 ORTHO05D002188 1.5e-15 89.0 183 32.8
Sabra01G0070100 Salix brachista HOM05D002129 ORTHO05D002188 2.0e-15 88.6 184 33.2
FAN08G2643 Fragaria x ananassa HOM05D002129 ORTHO05D002188 5.7e-15 87.0 187 31.6
CSS0045654 Camellia sinensis var. sinensis HOM05D002129 ORTHO05D002188 7.5e-15 86.7 174 34.5
Haze_08667 Corylus avellana HOM05D002129 ORTHO05D002188 7.5e-15 86.7 184 33.7
Medtr8g099275 Medicago truncatula HOM05D002129 ORTHO05D002188 7.5e-15 86.7 183 33.3
FAN18G4528 Fragaria x ananassa HOM05D002129 ORTHO05D002188 1.7e-14 85.5 187 31.6
CiPaw.11G123900 Carya illinoinensis HOM05D002129 ORTHO05D002188 2.2e-14 85.1 184 31.5
Duzib205G0555 Durio zibethinus HOM05D002129 ORTHO05D002188 2.2e-14 85.1 179 33.0
Cfa012842 Carpinus fangiana HOM05D002129 ORTHO05D002188 3.7e-14 84.3 184 33.2
Dinv37550 Davidia involucrata HOM05D002129 ORTHO05D002188 4.9e-14 84.0 183 33.3
FvH4_5g04072 Fragaria vesca HOM05D002129 ORTHO05D002188 4.9e-14 84.0 185 31.4
FAN13G0971 Fragaria x ananassa HOM05D002129 ORTHO05D002188 4.9e-14 84.0 187 31.6
CANSAT21G2383 Cannabis sativa HOM05D002129 ORTHO05D002188 6.4e-14 83.6 171 34.5
FAN18G3989 Fragaria x ananassa HOM05D002129 ORTHO05D002188 6.4e-14 83.6 187 31.0
MELO3C016308.2 Cucumis melo HOM05D002129 ORTHO05D002188 1.1e-13 82.8 195 32.3
CANSAT21G0822 Cannabis sativa HOM05D002129 ORTHO05D002188 2.4e-13 81.6 182 34.1
Sed0022097 Sechium edule HOM05D002129 ORTHO05D002188 2.4e-13 81.6 184 31.0
AUR62019808 Chenopodium quinoa HOM05D002129 ORTHO05D002188 4.1e-13 80.9 185 29.2
DCAR_005027 Daucus carota HOM05D002129 ORTHO05D002188 4.1e-13 80.9 191 31.4
Phvul.002G296300 Phaseolus vulgaris HOM05D002129 ORTHO05D002188 4.1e-13 80.9 175 30.9
AUR62010809 Chenopodium quinoa HOM05D002129 ORTHO05D002188 5.4e-13 80.5 185 29.2
Peaxi162Scf00074g01134 Petunia axillaris HOM05D002129 ORTHO05D002188 7.0e-13 80.1 199 27.6
TPR.G3412 Trifolium pratense HOM05D002129 ORTHO05D002188 7.0e-13 80.1 183 33.3
Ciclev10018618m.g Citrus clementina HOM05D002129 ORTHO05D002188 9.2e-13 79.7 184 32.6
Manes.10G064266 Manihot esculenta HOM05D002129 ORTHO05D002188 2.0e-12 78.6 214 29.0
QL02p031447 Quercus lobata HOM05D002129 ORTHO05D002188 2.0e-12 78.6 187 31.0
COL.COLO4_21718 Corchorus olitorius HOM05D002129 ORTHO05D002188 2.7e-12 78.2 183 32.2
PGR042G1587 Punica granatum HOM05D002129 ORTHO05D002188 2.7e-12 78.2 187 31.0
ClCG07G014890 Citrullus lanatus HOM05D002129 ORTHO05D002188 7.8e-12 76.6 193 31.1
PGSC0003DMG400012303 Solanum tuberosum HOM05D002129 ORTHO05D002188 7.8e-12 76.6 199 27.1
Sopen08g030310 Solanum pennellii HOM05D002129 ORTHO05D002188 1.0e-11 76.3 199 28.1
CsaV3_4G006420 Cucumis sativus L. HOM05D002129 ORTHO05D002188 1.3e-11 75.9 189 30.7
Gorai.003G081700 Gossypium raimondii HOM05D002129 ORTHO05D002188 1.3e-11 75.9 159 31.4
Nitab4.5_0000223g0210 Nicotiana tabacum HOM05D002129 ORTHO05D002188 1.3e-11 75.9 190 27.9
CAN.G532.94 Capsicum annuum HOM05D002129 ORTHO05D002188 1.7e-11 75.5 195 27.2
Sabra03G0098800 Salix brachista HOM05D002129 ORTHO05D002188 1.7e-11 75.5 103 43.7
Solyc08g082010.3 Solanum lycopersicum HOM05D002129 ORTHO05D002188 1.7e-11 75.5 199 27.1
Oeu009945.1 Olea europaea HOM05D002129 ORTHO05D002188 2.3e-11 75.1 194 27.3
Potri.003G137300 Populus trichocarpa HOM05D002129 ORTHO05D002188 2.3e-11 75.1 103 43.7
MD14G1121400 Malus domestica HOM05D002129 ORTHO05D002188 3.0e-11 74.7 159 31.4
Ah.12g052310 Amaranthus hybridus HOM05D002129 ORTHO05D002188 3.9e-11 74.3 190 28.4
EL10Ac5g12884 Beta vulgaris HOM05D002129 ORTHO05D002188 3.9e-11 74.3 185 28.1
Psat7g027480 Pisum sativum HOM05D002129 ORTHO05D002188 3.9e-11 74.3 183 31.1
RcHm_v2.0_Chr7g0195441 Rosa chinensis HOM05D002129 ORTHO05D002188 6.6e-11 73.6 149 32.9
Migut.E01236 Erythranthe guttata HOM05D002129 ORTHO05D002188 2.5e-10 71.6 171 28.7
MBI07_g09921_MAGBIO Magnolia biondii HOM05D002129 ORTHO05D002188 2.5e-10 71.6 204 30.4
Phvul.002G163000 Phaseolus vulgaris HOM05D002129 ORTHO05D002188 5.6e-10 70.5 125 36.8
Migut.A00678 Erythranthe guttata HOM05D002129 ORTHO05D002188 7.3e-10 70.1 197 29.4
Lalb_Chr16g0376981 Lupinus albus HOM05D002129 ORTHO05D002188 7.3e-10 70.1 183 30.6
Psat7g027680 Pisum sativum HOM05D002129 ORTHO05D002188 7.3e-10 70.1 193 30.1
Sed0025225 Sechium edule HOM05D002129 ORTHO05D002188 7.3e-10 70.1 213 30.0
MELO3C016309.2 Cucumis melo HOM05D002129 ORTHO05D002188 9.5e-10 69.7 216 28.7
TPR.G3398 Trifolium pratense HOM05D002129 ORTHO05D002188 9.5e-10 69.7 122 39.3
unitig_52.g17439 Utricularia gibba HOM05D002129 ORTHO05D002188 1.2e-09 69.3 181 30.4
FAN18G4347 Fragaria x ananassa HOM05D002129 ORTHO05D002188 1.6e-09 68.9 149 31.5
MD06G1102200 Malus domestica HOM05D002129 ORTHO05D002188 2.1e-09 68.6 132 35.6
TWI15G0725 Tripterygium wilfordii HOM05D002129 ORTHO05D002188 2.1e-09 68.6 183 32.2
Atru.chr9.2043 Acer truncatum HOM05D002129 ORTHO05D002188 3.6e-09 67.8 117 41.0
CAN.G825.42 Capsicum annuum HOM05D002129 ORTHO05D002188 3.6e-09 67.8 199 24.6
Ca_17496_v3 Cicer arietinum L. HOM05D002129 ORTHO05D002188 3.6e-09 67.8 183 29.0
Eucgr.E00844 Eucalyptus grandis HOM05D002129 ORTHO05D002188 3.6e-09 67.8 156 28.2
Ah.07g197190 Amaranthus hybridus HOM05D002129 ORTHO05D002188 4.7e-09 67.4 185 28.1
FvH4_5g04071 Fragaria vesca HOM05D002129 ORTHO05D002188 4.7e-09 67.4 149 30.9
Medtr8g099265 Medicago truncatula HOM05D002129 ORTHO05D002188 4.7e-09 67.4 168 30.4
FAN04G1467 Fragaria x ananassa HOM05D002129 ORTHO05D002188 6.2e-09 67.0 149 30.9
CsaV3_4G006410 Cucumis sativus L. HOM05D002129 ORTHO05D002188 8.0e-09 66.6 216 28.2
FAN18G1710 Fragaria x ananassa HOM05D002129 ORTHO05D002188 8.0e-09 66.6 149 30.9
Lalb_Chr05g0224251 Lupinus albus HOM05D002129 ORTHO05D002188 8.0e-09 66.6 197 27.9
Manes.01G046000 Manihot esculenta HOM05D002129 ORTHO05D002188 8.0e-09 66.6 129 37.2
arahy.Tifrunner.gnm1.ann1.F3VNHJ Arachis hypogaea HOM05D002129 ORTHO05D002188 1.1e-08 66.2 184 27.2
FAN04G1700 Fragaria x ananassa HOM05D002129 ORTHO05D002188 1.1e-08 66.2 187 27.3
FAN04G3154 Fragaria x ananassa HOM05D002129 ORTHO05D002188 1.1e-08 66.2 187 27.3
Potri.001G094266 Populus trichocarpa HOM05D002129 ORTHO05D002188 2.3e-08 65.1 95 42.1
Prupe.5G115200 Prunus persica HOM05D002129 ORTHO05D002188 2.3e-08 65.1 196 28.6
Actinidia27335 Actinidia chinensis HOM05D002129 ORTHO05D002188 5.2e-08 63.9 196 33.7
Sed0023438 Sechium edule HOM05D002129 ORTHO05D002188 6.8e-08 63.5 99 36.4
Medtr8g099280 Medicago truncatula HOM05D002129 ORTHO05D002188 8.9e-08 63.2 183 30.1
unitig_62.g23616 Utricularia gibba HOM05D002129 ORTHO05D002188 8.9e-08 63.2 203 26.1
MSTRG.25657 Avicennia marina HOM05D002129 ORTHO05D002188 1.5e-07 62.4 189 27.0
ECA233G6022 Erigeron canadensis HOM05D002129 ORTHO05D002188 1.5e-07 62.4 188 30.3
Actinidia27334 Actinidia chinensis HOM05D002129 ORTHO05D002188 3.4e-07 61.2 170 29.4
Gohir.D03G081900 Gossypium hirsutum HOM05D002129 ORTHO05D002188 3.4e-07 61.2 192 31.8
Sc07g0009960 Simmondsia chinensis HOM05D002129 ORTHO05D002188 3.4e-07 61.2 50 56.0
vmacro13912 Vaccinium macrocarpon HOM05D002129 ORTHO05D002188 3.4e-07 61.2 180 28.3
Nitab4.5_0004161g0030 Nicotiana tabacum HOM05D002129 ORTHO05D002188 5.8e-07 60.5 193 25.4
Sc07g0009950 Simmondsia chinensis HOM05D002129 ORTHO05D002188 7.5e-07 60.1 84 41.7
arahy.Tifrunner.gnm1.ann1.P7UIV5 Arachis hypogaea HOM05D002129 ORTHO05D002188 1.3e-06 59.3 184 25.5
Aa31LG9G340 Aethionema arabicum HOM05D002129 ORTHO05D002188 1.7e-06 58.9 183 28.4
MSTRG.1816 Avicennia marina HOM05D002129 ORTHO05D002188 2.2e-06 58.5 184 26.6
arahy.Tifrunner.gnm1.ann1.X2XLI1 Arachis hypogaea HOM05D002129 ORTHO05D002188 3.7e-06 57.8 187 27.3
LjContig00312_ERROPOS870357g0010036 Lotus japonicus HOM05D002129 ORTHO05D002188 3.7e-06 57.8 189 29.1
Sc01g0010120 Simmondsia chinensis HOM05D002129 ORTHO05D002188 4.9e-06 57.4 183 27.9
SalBow8G2059 Salvia bowleyana HOM05D002129 ORTHO05D002188 6.4e-06 57.0 188 28.2


User provided reference genes

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