Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI06973 Sapria himalayana HOM05D006022 ORTHO05D007649 7.9e-261 903.3 469 100.0
Potri.001G089900 Populus trichocarpa HOM05D006022 ORTHO05D007649 3.2e-68 263.5 400 44.5
Atru.chr9.1963 Acer truncatum HOM05D006022 ORTHO05D007649 1.3e-66 258.1 432 40.5
Dinv38822 Davidia involucrata HOM05D006022 ORTHO05D007406 1.9e-65 254.2 370 44.9
Ciclev10018527m.g Citrus clementina HOM05D006022 ORTHO05D007649 2.5e-65 253.8 364 45.3
Sabra01G0066300 Salix brachista HOM05D006022 ORTHO05D007649 4.3e-65 253.1 395 43.8
QL02p030100 Quercus lobata HOM05D006022 ORTHO05D007649 4.8e-64 249.6 368 45.4
Gorai.004G132300 Gossypium raimondii HOM05D006022 ORTHO05D007649 8.1e-64 248.8 410 42.2
GSVIVG01019556001 Vitis vinifera HOM05D006022 ORTHO05D007649 1.1e-63 248.4 339 47.8
Gohir.A08G112400 Gossypium hirsutum HOM05D006022 ORTHO05D007649 1.8e-63 247.7 397 42.8
Thecc.03G300300 Theobroma cacao HOM05D006022 ORTHO05D007649 5.3e-63 246.1 411 42.6
Gohir.D08G125400 Gossypium hirsutum HOM05D006022 ORTHO05D007649 1.5e-62 244.6 411 42.1
COL.COLO4_10720 Corchorus olitorius HOM05D006022 ORTHO05D007649 5.8e-62 242.7 413 42.9
Actinidia22171 Actinidia chinensis HOM05D006022 ORTHO05D007649 7.6e-62 242.3 429 41.7
vmacro11345 Vaccinium macrocarpon HOM05D006022 ORTHO05D007649 1.3e-61 241.5 395 43.0
Rhsim02G0245100 Rhododendron simsii HOM05D006022 ORTHO05D007649 1.7e-61 241.1 419 41.8
Cfa011987 Carpinus fangiana HOM05D006022 ORTHO05D007649 2.2e-61 240.7 429 41.3
Duzib084G0652 Durio zibethinus HOM05D006022 ORTHO05D007649 2.2e-61 240.7 411 43.1
Lj2A165T43 Lonicera japonica HOM05D006022 ORTHO05D007649 2.2e-61 240.7 383 44.4
Nn1g00246 Nelumbo nucifera HOM05D006022 ORTHO05D007649 2.2e-61 240.7 390 42.6
RcHm_v2.0_Chr7g0194241 Rosa chinensis HOM05D006022 ORTHO05D007649 2.2e-61 240.7 441 38.8
Oeu023154.1 Olea europaea HOM05D006022 ORTHO05D007649 2.9e-61 240.4 395 42.3
RhsimUnG0007600 Rhododendron simsii HOM05D006022 ORTHO05D007649 2.9e-61 240.4 431 40.4
Thhalv10028398m.g Eutrema salsugineum HOM05D006022 ORTHO05D007649 4.9e-61 239.6 321 47.4
CANSAT21G0687 Cannabis sativa HOM05D006022 ORTHO05D007649 6.4e-61 239.2 473 38.5
Phvul.002G299600 Phaseolus vulgaris HOM05D006022 ORTHO05D007649 6.4e-61 239.2 372 42.2
MELO3C005765.2 Cucumis melo HOM05D006022 ORTHO05D007649 2.4e-60 237.3 332 46.4
Aqoxy5G04291 Aquilegia oxysepala HOM05D006022 ORTHO05D007649 4.2e-60 236.5 356 43.3
AUR62019856 Chenopodium quinoa HOM05D006022 ORTHO05D007649 4.2e-60 236.5 425 40.5
Hma1.2p1_0359F.1_g135140 Hydrangea macrophylla HOM05D006022 ORTHO05D007649 4.2e-60 236.5 331 46.2
Cpa.g.sc79.13 Carica papaya HOM05D006022 ORTHO05D007649 7.1e-60 235.7 389 42.2
Haze_09085 Corylus avellana HOM05D006022 ORTHO05D007649 9.3e-60 235.3 430 41.6
CiPaw.12G081600 Carya illinoinensis HOM05D006022 ORTHO05D007649 1.2e-59 235.0 433 40.0
Medtr8g099585 Medicago truncatula HOM05D006022 ORTHO05D007649 1.2e-59 235.0 380 41.1
Prupe.5G122300 Prunus persica HOM05D006022 ORTHO05D007649 1.2e-59 235.0 402 41.0
ClCG01G001730 Citrullus lanatus HOM05D006022 ORTHO05D007649 1.6e-59 234.6 324 45.7
Sed0008879 Sechium edule HOM05D006022 ORTHO05D007649 1.6e-59 234.6 407 42.3
Glyma.05G217800 Glycine max HOM05D006022 ORTHO05D007649 2.7e-59 233.8 425 40.2
PGR042G3794 Punica granatum HOM05D006022 ORTHO05D007649 2.7e-59 233.8 333 46.5
CsaV3_5G001870 Cucumis sativus L. HOM05D006022 ORTHO05D007649 3.5e-59 233.4 347 44.7
TWI81G0375 Tripterygium wilfordii HOM05D006022 ORTHO05D007649 3.5e-59 233.4 412 39.6
Lsat_1_v5_gn_6_8380 Lactuca sativa HOM05D006022 ORTHO05D007649 6.0e-59 232.6 305 47.5
TAR375G1078 Trochodendron aralioides HOM05D006022 ORTHO05D007649 1.7e-58 231.1 399 40.9
FvH4_5g04850 Fragaria vesca HOM05D006022 ORTHO05D007649 3.0e-58 230.3 443 39.3
THA.LOC104807002 Tarenaya hassleriana HOM05D006022 ORTHO05D007649 3.0e-58 230.3 382 44.0
VMungo0251G1998 Vigna mungo HOM05D006022 ORTHO05D007649 3.0e-58 230.3 374 42.8
AUR62010858 Chenopodium quinoa HOM05D006022 ORTHO05D007649 5.1e-58 229.6 425 40.5
MD14G1130300 Malus domestica HOM05D006022 ORTHO05D007649 5.1e-58 229.6 373 42.4
Carub.0006s2968 Capsella rubella HOM05D006022 ORTHO05D007649 1.9e-57 227.6 390 39.7
Psat7g023280 Pisum sativum HOM05D006022 ORTHO05D007649 1.9e-57 227.6 385 41.0
EL10Ac5g12933 Beta vulgaris HOM05D006022 ORTHO05D007649 2.5e-57 227.3 426 37.6
Cc08_g16230 Coffea canephora HOM05D006022 ORTHO05D007649 3.3e-57 226.9 373 41.8
Lj4g0024036 Lotus japonicus HOM05D006022 ORTHO05D007649 3.3e-57 226.9 410 39.8
FAN04G2854 Fragaria x ananassa HOM05D006022 ORTHO05D007649 4.3e-57 226.5 443 38.8
FAN18G3678 Fragaria x ananassa HOM05D006022 ORTHO05D007649 4.3e-57 226.5 440 38.9
AT4G10930 Arabidopsis thaliana HOM05D006022 ORTHO05D007649 9.6e-57 225.3 393 39.9
FAN18G0793 Fragaria x ananassa HOM05D006022 ORTHO05D007649 9.6e-57 225.3 440 38.9
HanXRQChr10g0316931 Helianthus annuus HOM05D006022 ORTHO05D007649 9.6e-57 225.3 390 40.8
Sp6g06550 Schrenkiella parvula HOM05D006022 ORTHO05D007649 9.6e-57 225.3 337 42.7
Glyma.08G023800 Glycine max HOM05D006022 ORTHO05D007649 1.3e-56 224.9 417 38.8
A03p29210 Brassica napus HOM05D006022 ORTHO05D007649 6.2e-56 222.6 389 40.1
BcaC01g04650 Brassica carinata HOM05D006022 ORTHO05D007649 8.1e-56 222.2 389 39.8
C03p35290 Brassica napus HOM05D006022 ORTHO05D007649 8.1e-56 222.2 389 39.8
BolC3t15840H Brassica oleracea HOM05D006022 ORTHO05D007649 8.1e-56 222.2 389 39.8
ECA233G0648 Erigeron canadensis HOM05D006022 ORTHO05D007649 1.4e-55 221.5 379 39.6
BraA03t12116Z Brassica rapa HOM05D006022 ORTHO05D007649 1.8e-55 221.1 389 39.8
Ca_17472_v3 Cicer arietinum L. HOM05D006022 ORTHO05D007649 2.4e-55 220.7 386 40.4
Eucgr.E00880 Eucalyptus grandis HOM05D006022 ORTHO05D007649 2.4e-55 220.7 355 43.1
Manes.01G050200 Manihot esculenta HOM05D006022 ORTHO05D007649 2.4e-55 220.7 411 40.4
Lalb_Chr05g0224031 Lupinus albus HOM05D006022 ORTHO05D007649 3.1e-55 220.3 436 36.7
BcaB01g02727 Brassica carinata HOM05D006022 ORTHO05D007649 5.3e-55 219.5 465 35.9
CSS0021468 Camellia sinensis var. sinensis HOM05D006022 ORTHO05D007649 5.3e-55 219.5 392 40.8
MD06G1109300 Malus domestica HOM05D006022 ORTHO05D007649 6.9e-55 219.2 400 39.8
AL6G45030 Arabidopsis lyrata HOM05D006022 ORTHO05D007649 1.2e-54 218.4 396 38.9
arahy.Tifrunner.gnm1.ann1.DK6PZW Arachis hypogaea HOM05D006022 ORTHO05D007649 1.2e-54 218.4 343 42.6
PSO170G1024 Papaver somniferum HOM05D006022 ORTHO05D007649 2.6e-54 217.2 343 41.7
Ah.07g197550 Amaranthus hybridus HOM05D006022 ORTHO05D007649 3.4e-54 216.9 431 38.7
CARHR255670 Cardamine hirsuta HOM05D006022 ORTHO05D007649 3.4e-54 216.9 484 35.3
arahy.Tifrunner.gnm1.ann1.MN1JRI Arachis hypogaea HOM05D006022 ORTHO05D007649 4.5e-54 216.5 344 41.6
MBI07_g39841_MAGBIO Magnolia biondii HOM05D006022 ORTHO05D007649 4.5e-54 216.5 448 37.9
Hund14211 Selenicereus undatus HOM05D006022 ORTHO05D007649 2.9e-53 213.8 410 38.8
TPR.G3389 Trifolium pratense HOM05D006022 ORTHO05D007649 2.9e-53 213.8 403 39.7
SGA_v2.0_scaffold111G31401 Striga asiatica HOM05D006022 ORTHO05D007649 3.8e-53 213.4 383 38.1
Sopen12g024380 Solanum pennellii HOM05D006022 ORTHO05D007649 6.4e-53 212.6 386 39.9
CAN.G390.10 Capsicum annuum HOM05D006022 ORTHO05D007649 8.4e-53 212.2 386 40.7
ATR0602G083 Amborella trichopoda HOM05D006022 ORTHO05D007649 1.9e-52 211.1 372 39.8
MSTRG.1801 Avicennia marina HOM05D006022 ORTHO05D007649 3.2e-52 210.3 375 38.1
Solyc12g055910.3 Solanum lycopersicum HOM05D006022 ORTHO05D007649 3.2e-52 210.3 384 39.3
DCAR_029909 Daucus carota HOM05D006022 ORTHO05D007649 5.4e-52 209.5 495 34.9
Peaxi162Scf00117g00919 Petunia axillaris HOM05D006022 ORTHO05D007649 4.6e-51 206.5 390 39.5
Nitab4.5_0004515g0030 Nicotiana tabacum HOM05D006022 ORTHO05D007649 6.0e-51 206.1 417 38.1
unitig_26.g9566 Utricularia gibba HOM05D006022 ORTHO05D007649 6.7e-50 202.6 342 40.1
Zm00001eb209080 Zea mays HOM05D006022 ORTHO05D007649 1.1e-49 201.8 376 40.7
Migut.E01259 Erythranthe guttata HOM05D006022 ORTHO05D007649 3.7e-48 196.8 382 38.5
Nitab4.5_0004010g0010 Nicotiana tabacum HOM05D006022 ORTHO05D007649 1.1e-47 195.3 440 35.7
HPP92_009829 Vanilla planifolia HOM05D006022 ORTHO05D007649 2.2e-45 187.6 375 38.4
Sc22g0004930 Simmondsia chinensis HOM05D006022 ORTHO05D007649 1.3e-42 178.3 357 36.4
TPR.G40773 Trifolium pratense HOM05D006022 ORTHO05D007649 7.6e-38 162.5 184 50.0
SEGI_16880 Sequoiadendron giganteum HOM05D006022 ORTHO05D007649 6.5e-37 159.5 378 32.8
Pp3c6_15100 Physcomitrium patens HOM05D006022 ORTHO05D007649 1.0e-13 82.4 455 25.3
Os12g0209700 Oryza sativa ssp. japonica HOM05D006022 ORTHO05D007649 1.2e-11 75.5 138 39.9
Mapoly0002s0107 Marchantia polymorpha HOM05D006022 ORTHO05D007649 1.4e-10 72.0 391 24.8
AagrBONN_evm.TU.Sc2ySwM_228.3550 Anthoceros agrestis HOM05D006022 ORTHO05D007649 8.8e-10 69.3 409 24.4


User provided reference genes

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