Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI06815 Sapria himalayana HOM05D001960 ORTHO05D033665 5.7e-127 457.6 231 100.0
Peaxi162Scf00163g00105 Petunia axillaris HOM05D001960 ORTHO05D004348 2.8e-33 146.4 76 93.4
unitig_748.g8436 Utricularia gibba HOM05D001960 ORTHO05D004348 2.8e-33 146.4 78 91.0
GSVIVG01011352001 Vitis vinifera HOM05D001960 ORTHO05D004348 3.6e-33 146.0 76 93.4
CAN.G128.149 Capsicum annuum HOM05D001960 ORTHO05D004348 4.8e-33 145.6 76 92.1
Migut.K01329 Erythranthe guttata HOM05D001960 ORTHO05D004348 4.8e-33 145.6 76 92.1
QL02p080802 Quercus lobata HOM05D001960 ORTHO05D004348 4.8e-33 145.6 76 92.1
Solyc10g081530.2 Solanum lycopersicum HOM05D001960 ORTHO05D004348 4.8e-33 145.6 76 92.1
Sopen10g032040 Solanum pennellii HOM05D001960 ORTHO05D004348 4.8e-33 145.6 76 92.1
PGSC0003DMG400028218 Solanum tuberosum HOM05D001960 ORTHO05D004348 4.8e-33 145.6 76 92.1
MSTRG.15485 Avicennia marina HOM05D001960 ORTHO05D004348 6.2e-33 145.2 76 92.1
CANSAT11G2018 Cannabis sativa HOM05D001960 ORTHO05D004348 6.2e-33 145.2 76 92.1
Cfa007519 Carpinus fangiana HOM05D001960 ORTHO05D004348 6.2e-33 145.2 76 92.1
CiPaw.03G029300 Carya illinoinensis HOM05D001960 ORTHO05D004348 6.2e-33 145.2 76 92.1
MELO3C009887.2 Cucumis melo HOM05D001960 ORTHO05D004348 6.2e-33 145.2 76 92.1
CsaV3_3G041630 Cucumis sativus L. HOM05D001960 ORTHO05D004348 6.2e-33 145.2 76 92.1
Migut.H00896 Erythranthe guttata HOM05D001960 ORTHO05D004348 6.2e-33 145.2 76 92.1
Eucgr.I01925 Eucalyptus grandis HOM05D001960 ORTHO05D004348 6.2e-33 145.2 115 67.0
Glyma.09G240300 Glycine max HOM05D001960 ORTHO05D004348 6.2e-33 145.2 76 92.1
Glyma.18G256200 Glycine max HOM05D001960 ORTHO05D004348 6.2e-33 145.2 76 92.1
Hma1.2p1_0449F.1_g155170 Hydrangea macrophylla HOM05D001960 ORTHO05D004348 6.2e-33 145.2 76 92.1
Manes.17G022600 Manihot esculenta HOM05D001960 ORTHO05D004348 6.2e-33 145.2 76 92.1
Manes.17G022700 Manihot esculenta HOM05D001960 ORTHO05D004348 6.2e-33 145.2 76 92.1
Nitab4.5_0013371g0010 Nicotiana tabacum HOM05D001960 ORTHO05D004348 6.2e-33 145.2 76 92.1
Phvul.008G043300 Phaseolus vulgaris HOM05D001960 ORTHO05D004348 6.2e-33 145.2 76 92.1
PGR142G1484 Punica granatum HOM05D001960 ORTHO05D004348 6.2e-33 145.2 76 92.1
VMungo1383G3104 Vigna mungo HOM05D001960 ORTHO05D004348 6.2e-33 145.2 76 92.1
Actinidia38882 Actinidia chinensis HOM05D001960 ORTHO05D004348 8.1e-33 144.8 76 92.1
Aa31LG9G1760 Aethionema arabicum HOM05D001960 ORTHO05D004348 8.1e-33 144.8 76 92.1
Ah.10g031310 Amaranthus hybridus HOM05D001960 ORTHO05D004348 8.1e-33 144.8 76 92.1
Ah.12g065390 Amaranthus hybridus HOM05D001960 ORTHO05D004348 8.1e-33 144.8 76 92.1
EL10Ac2g02943 Beta vulgaris HOM05D001960 ORTHO05D004348 8.1e-33 144.8 76 92.1
BcaB07g30124 Brassica carinata HOM05D001960 ORTHO05D004348 8.1e-33 144.8 76 92.1
BcaC03g17524 Brassica carinata HOM05D001960 ORTHO05D004348 8.1e-33 144.8 76 92.1
BcaC06g33635 Brassica carinata HOM05D001960 ORTHO05D008957 8.1e-33 144.8 76 92.1
A02p36010 Brassica napus HOM05D001960 ORTHO05D004348 8.1e-33 144.8 76 92.1
A06p40400 Brassica napus HOM05D001960 ORTHO05D004348 8.1e-33 144.8 76 92.1
C02p54850 Brassica napus HOM05D001960 ORTHO05D004348 8.1e-33 144.8 76 92.1
C07p37650 Brassica napus HOM05D001960 ORTHO05D004348 8.1e-33 144.8 76 92.1
BolC2t11546H Brassica oleracea HOM05D001960 ORTHO05D004348 8.1e-33 144.8 76 92.1
BolC7t44281H Brassica oleracea HOM05D001960 ORTHO05D007725 8.1e-33 144.8 76 92.1
BraA02t08600Z Brassica rapa HOM05D001960 ORTHO05D004348 8.1e-33 144.8 76 92.1
BraA06t26958Z Brassica rapa HOM05D001960 ORTHO05D004348 8.1e-33 144.8 76 92.1
Carub.0005s0725 Capsella rubella HOM05D001960 ORTHO05D004348 8.1e-33 144.8 76 92.1
Thhalv10004498m.g Eutrema salsugineum HOM05D001960 ORTHO05D004348 8.1e-33 144.8 76 92.1
Oeu050223.1 Olea europaea HOM05D001960 ORTHO05D004348 8.1e-33 144.8 115 67.0
Sp2g17360 Schrenkiella parvula HOM05D001960 ORTHO05D004348 8.1e-33 144.8 76 92.1
Hund13234 Selenicereus undatus HOM05D001960 ORTHO05D004348 8.1e-33 144.8 76 92.1
CSS0024221 Camellia sinensis var. sinensis HOM05D001960 ORTHO05D004348 1.1e-32 144.4 76 92.1
Eucgr.I02249 Eucalyptus grandis HOM05D001960 ORTHO05D004348 1.1e-32 144.4 115 67.0
RcHm_v2.0_Chr2g0169031 Rosa chinensis HOM05D001960 ORTHO05D004348 1.1e-32 144.4 76 92.1
Aa31LG2G4500 Aethionema arabicum HOM05D001960 ORTHO05D004348 1.4e-32 144.1 76 90.8
ATR0706G077 Amborella trichopoda HOM05D001960 ORTHO05D004348 1.4e-32 144.1 76 90.8
MSTRG.3317 Avicennia marina HOM05D001960 ORTHO05D004348 1.4e-32 144.1 76 90.8
Ciclev10012084m.g Citrus clementina HOM05D001960 ORTHO05D004348 1.4e-32 144.1 76 90.8
COL.COLO4_25163 Corchorus olitorius HOM05D001960 ORTHO05D004348 1.4e-32 144.1 76 90.8
Duzib147G0831 Durio zibethinus HOM05D001960 ORTHO05D004348 1.4e-32 144.1 76 90.8
Duzib187G1412 Durio zibethinus HOM05D001960 ORTHO05D004348 1.4e-32 144.1 76 90.8
FvH4_6g49160 Fragaria vesca HOM05D001960 ORTHO05D004348 1.4e-32 144.1 76 92.1
FAN02G2692 Fragaria x ananassa HOM05D001960 ORTHO05D004348 1.4e-32 144.1 76 92.1
FAN05G5323 Fragaria x ananassa HOM05D001960 ORTHO05D004348 1.4e-32 144.1 76 92.1
FAN09G2990 Fragaria x ananassa HOM05D007272 ORTHO05D009305 1.4e-32 144.1 76 92.1
FAN14G2932 Fragaria x ananassa HOM05D001960 ORTHO05D004348 1.4e-32 144.1 76 92.1
Gohir.A07G215700 Gossypium hirsutum HOM05D001960 ORTHO05D004348 1.4e-32 144.1 76 90.8
Gohir.A09G022100 Gossypium hirsutum HOM05D001960 ORTHO05D004348 1.4e-32 144.1 76 90.8
Gohir.D07G222700 Gossypium hirsutum HOM05D001960 ORTHO05D004348 1.4e-32 144.1 76 90.8
Gohir.D09G021300 Gossypium hirsutum HOM05D001960 ORTHO05D004348 1.4e-32 144.1 76 90.8
Gorai.001G257000 Gossypium raimondii HOM05D001960 ORTHO05D004348 1.4e-32 144.1 76 90.8
Gorai.006G025300 Gossypium raimondii HOM05D001960 ORTHO05D004348 1.4e-32 144.1 76 90.8
Manes.17G022500 Manihot esculenta HOM05D001960 ORTHO05D004348 1.4e-32 144.1 76 90.8
Potri.017G079200 Populus trichocarpa HOM05D001960 ORTHO05D004348 1.4e-32 144.1 76 90.8
Rhsim09G0146300 Rhododendron simsii HOM05D001960 ORTHO05D004348 1.4e-32 144.1 76 92.1
Thecc.04G075700 Theobroma cacao HOM05D001960 ORTHO05D004348 1.4e-32 144.1 76 90.8
AL5G18390 Arabidopsis lyrata HOM05D001960 ORTHO05D004348 1.8e-32 143.7 76 90.8
AL5G18410 Arabidopsis lyrata HOM05D001960 ORTHO05D004348 1.8e-32 143.7 76 90.8
AT3G28710 Arabidopsis thaliana HOM05D001960 ORTHO05D004348 1.8e-32 143.7 76 90.8
BcaB04g19480 Brassica carinata HOM05D001960 ORTHO05D004348 1.8e-32 143.7 76 90.8
A09p03760 Brassica napus HOM05D001960 ORTHO05D004348 1.8e-32 143.7 76 90.8
C09p03950 Brassica napus HOM05D001960 ORTHO05D004348 1.8e-32 143.7 76 90.8
BraA09t36012Z Brassica rapa HOM05D001960 ORTHO05D004348 1.8e-32 143.7 76 90.8
Carub.0005s0724 Capsella rubella HOM05D001960 ORTHO05D004348 1.8e-32 143.7 76 90.8
CiPaw.04G019300 Carya illinoinensis HOM05D001960 ORTHO05D004348 1.8e-32 143.7 75 92.0
Ca_04106_v3 Cicer arietinum L. HOM05D001960 ORTHO05D004348 1.8e-32 143.7 75 92.0
Ca_04115_v3 Cicer arietinum L. HOM05D001960 ORTHO05D004348 1.8e-32 143.7 75 92.0
Thhalv10004497m.g Eutrema salsugineum HOM05D001960 ORTHO05D004348 1.8e-32 143.7 76 90.8
Lj1g0025494 Lotus japonicus HOM05D001960 ORTHO05D004348 1.8e-32 143.7 76 90.8
Lalb_Chr02g0159521 Lupinus albus HOM05D001960 ORTHO05D004348 1.8e-32 143.7 76 90.8
Lalb_Chr02g0159571 Lupinus albus HOM05D001960 ORTHO05D004348 1.8e-32 143.7 76 90.8
Medtr7g009485 Medicago truncatula HOM05D001960 ORTHO05D004348 1.8e-32 143.7 75 92.0
Medtr7g009590 Medicago truncatula HOM05D001960 ORTHO05D004348 1.8e-32 143.7 75 92.0
Nitab4.5_0000098g0050 Nicotiana tabacum HOM05D001960 ORTHO05D004348 1.8e-32 143.7 76 90.8
Psat3g196680 Pisum sativum HOM05D001960 ORTHO05D004348 1.8e-32 143.7 75 92.0
Sabra17G0070300 Salix brachista HOM05D001960 ORTHO05D004348 1.8e-32 143.7 76 90.8
SalBow1G4343 Salvia bowleyana HOM05D001960 ORTHO05D004348 1.8e-32 143.7 76 90.8
Sp2g17353 Schrenkiella parvula HOM05D001960 ORTHO05D004348 1.8e-32 143.7 76 90.8
THA.LOC104805447 Tarenaya hassleriana HOM05D001960 ORTHO05D004348 1.8e-32 143.7 76 90.8
THA.LOC104823931 Tarenaya hassleriana HOM05D001960 ORTHO05D004348 1.8e-32 143.7 76 90.8
TPR.G4258 Trifolium pratense HOM05D001960 ORTHO05D004348 1.8e-32 143.7 75 92.0
Actinidia34797 Actinidia chinensis HOM05D001960 ORTHO05D004348 2.4e-32 143.3 76 90.8
Cpa.g.sc14.35 Carica papaya HOM05D001960 ORTHO05D004348 2.4e-32 143.3 76 90.8
DCAR_011153 Daucus carota HOM05D001960 ORTHO05D004348 2.4e-32 143.3 76 90.8
DCAR_011154 Daucus carota HOM05D001960 ORTHO05D004348 2.4e-32 143.3 76 90.8
Dinv33731 Davidia involucrata HOM05D001960 ORTHO05D004348 2.4e-32 143.3 76 90.8
ECA246G2943 Erigeron canadensis HOM05D001960 ORTHO05D004348 2.4e-32 143.3 76 90.8
HanXRQChr15g0474171 Helianthus annuus HOM05D001960 ORTHO05D004348 2.4e-32 143.3 76 90.8
Lj2A726T8 Lonicera japonica HOM05D001960 ORTHO05D004348 2.4e-32 143.3 76 90.8
MD09G1048000 Malus domestica HOM05D001960 ORTHO05D004348 2.4e-32 143.3 76 90.8
MD17G1048200 Malus domestica HOM05D001960 ORTHO05D004348 2.4e-32 143.3 76 90.8
Prupe.3G271000 Prunus persica HOM05D001960 ORTHO05D004348 2.4e-32 143.3 76 90.8
Sed0005459 Sechium edule HOM05D001960 ORTHO05D004348 2.4e-32 143.3 76 90.8
Sc02g0007720 Simmondsia chinensis HOM05D001960 ORTHO05D004348 2.4e-32 143.3 76 90.8
AT3G28715 Arabidopsis thaliana HOM05D001960 ORTHO05D004348 3.1e-32 142.9 76 90.8
BcaC04g23865 Brassica carinata HOM05D001960 ORTHO05D004348 3.1e-32 142.9 76 90.8
CSS0022239 Camellia sinensis var. sinensis HOM05D001960 ORTHO05D004348 3.1e-32 142.9 76 90.8
Hma1.2p1_0423F.1_g150240 Hydrangea macrophylla HOM05D001960 ORTHO05D004348 3.1e-32 142.9 76 90.8
Sed0008481 Sechium edule HOM05D001960 ORTHO05D004348 3.1e-32 142.9 76 90.8
Lsat_1_v5_gn_3_102160 Lactuca sativa HOM05D001960 ORTHO05D004348 4.0e-32 142.5 76 90.8
Lalb_Chr21g0318931 Lupinus albus HOM05D001960 ORTHO05D004348 4.0e-32 142.5 78 89.7
Zm00001eb160620 Zea mays HOM05D001960 ORTHO05D004348 4.0e-32 142.5 76 89.5
PSO017G2769 Papaver somniferum HOM05D001960 ORTHO05D004348 5.3e-32 142.1 76 89.5
PSO478G2180 Papaver somniferum HOM05D001960 ORTHO05D004348 5.3e-32 142.1 76 89.5
HanXRQChr17g0547421 Helianthus annuus HOM05D001960 ORTHO05D004348 6.9e-32 141.7 76 89.5
Oeu060924.1 Olea europaea HOM05D001960 ORTHO05D004348 6.9e-32 141.7 76 89.5
SGA_v2.0_scaffold236G43786 Striga asiatica HOM05D001960 ORTHO05D004348 6.9e-32 141.7 76 90.8
TWI60G1096 Tripterygium wilfordii HOM05D001960 ORTHO05D004348 6.9e-32 141.7 76 89.5
TAR374G0426 Trochodendron aralioides HOM05D001960 ORTHO05D004348 6.9e-32 141.7 75 90.7
BolC9t53326H Brassica oleracea HOM05D001960 ORTHO05D004348 9.0e-32 141.4 76 89.5
Nn1g04484 Nelumbo nucifera HOM05D001960 ORTHO05D004348 9.0e-32 141.4 76 88.2
Nn1g04485 Nelumbo nucifera HOM05D001960 ORTHO05D004348 9.0e-32 141.4 76 88.2
Os01g0587000 Oryza sativa ssp. japonica HOM05D001960 ORTHO05D004348 9.0e-32 141.4 76 88.2
AUR62031635 Chenopodium quinoa HOM05D001960 ORTHO05D004348 1.2e-31 141.0 76 89.5
AUR62038866 Chenopodium quinoa HOM05D001960 ORTHO05D004348 1.2e-31 141.0 76 89.5
Aqoxy3G03291 Aquilegia oxysepala HOM05D001960 ORTHO05D004348 1.5e-31 140.6 76 88.2
TAR629G1922 Trochodendron aralioides HOM05D001960 ORTHO05D004348 1.5e-31 140.6 76 88.2
AagrBONN_evm.TU.Sc2ySwM_340.257 Anthoceros agrestis HOM05D001960 ORTHO05D004348 2.0e-31 140.2 76 88.2
CDE06G0436 Ceratophyllum demersum HOM05D001960 ORTHO05D004348 3.4e-31 139.4 115 66.1
Lsat_1_v5_gn_2_88741 Lactuca sativa HOM05D001960 ORTHO05D004348 3.4e-31 139.4 76 86.8
Pp3c20_18840 Physcomitrium patens HOM05D001960 ORTHO05D004348 4.5e-31 139.0 76 88.2
TWI32G0692 Tripterygium wilfordii HOM05D001960 ORTHO05D004348 5.8e-31 138.7 76 86.8
TWI32G1350 Tripterygium wilfordii HOM05D001960 ORTHO05D004348 5.8e-31 138.7 76 86.8
SGA_v2.0_scaffold30G12526 Striga asiatica HOM05D001960 ORTHO05D004348 7.6e-31 138.3 76 88.2
Hma1.2p1_2982F.1_g331260 Hydrangea macrophylla HOM05D001960 ORTHO05D004348 1.3e-30 137.5 72 91.7
vmacro10254 Vaccinium macrocarpon HOM05D001960 ORTHO05D004348 1.3e-30 137.5 77 89.6
HPP92_006462 Vanilla planifolia HOM05D001960 ORTHO05D004348 1.7e-30 137.1 115 64.3
CBR_g20991 Chara braunii HOM05D001960 ORTHO05D004348 2.9e-30 136.3 76 85.5
ClCG10G014880 Citrullus lanatus HOM05D001960 ORTHO05D004348 2.9e-30 136.3 88 79.5
SMO137G0011 Selaginella moellendorffii HOM05D001960 ORTHO05D004348 2.9e-30 136.3 76 85.5
Mapoly0006s0177 Marchantia polymorpha HOM05D001960 ORTHO05D004348 3.2e-29 132.9 115 60.0
BolC6t36190H Brassica oleracea HOM05D001960 ORTHO05D033665 7.1e-29 131.7 72 88.9
CBR_g20375 Chara braunii HOM05D001960 ORTHO05D004348 7.1e-29 131.7 76 81.6
Mapoly0140s0023 Marchantia polymorpha HOM05D001960 ORTHO05D004348 1.2e-28 131.0 76 80.3
C06p11040 Brassica napus HOM05D001960 ORTHO05D033665 2.7e-28 129.8 72 87.5
Cre03.g176250 Chlamydomonas reinhardtii HOM05D001960 ORTHO05D004348 3.5e-28 129.4 76 81.6
Peaxi162Scf00061g02912 Petunia axillaris HOM05D001960 ORTHO05D004348 7.9e-28 128.3 67 92.5
arahy.Tifrunner.gnm1.ann1.EZF2RR Arachis hypogaea HOM05D001960 ORTHO05D004348 1.0e-27 127.9 110 63.6
arahy.Tifrunner.gnm1.ann1.M50Q99 Arachis hypogaea HOM05D001960 ORTHO05D004348 1.0e-27 127.9 110 63.6
Dinv33729 Davidia involucrata HOM05D001960 ORTHO05D004348 2.3e-27 126.7 76 78.9
Haze_14574 Corylus avellana HOM05D001960 ORTHO05D004348 2.1e-25 120.2 125 55.2
PRCOL_00003698 Prasinoderma coloniale HOM05D001960 ORTHO05D004348 7.6e-23 111.7 76 67.1
CARHR151640 Cardamine hirsuta HOM05D001960 ORTHO05D004348 8.4e-22 108.2 56 91.1
Medtr7g009550 Medicago truncatula HOM05D001960 ORTHO05D004348 9.3e-21 104.8 55 89.1
Nitab4.5_0000387g0100 Nicotiana tabacum HOM05D001960 ORTHO05D004348 1.8e-19 100.5 76 68.4
Haze_26095 Corylus avellana HOM05D001960 ORTHO05D004348 3.9e-19 99.4 77 62.3
Haze_26410 Corylus avellana HOM05D001960 ORTHO05D004348 6.7e-19 98.6 76 56.6
MCO01G616 Micromonas commoda HOM05D001960 ORTHO05D004348 8.7e-19 98.2 79 57.0
BolC2t11552H Brassica oleracea HOM05D001960 ORTHO05D004348 4.3e-18 95.9 70 74.3
Hund15632 Selenicereus undatus HOM05D001960 ORTHO05D004348 9.6e-18 94.7 51 88.2
Cfa024469 Carpinus fangiana HOM05D001960 ORTHO05D004348 3.7e-17 92.8 80 58.8
CARHR040070 Cardamine hirsuta HOM05D001960 ORTHO05D004348 1.8e-16 90.5 56 80.4
Nitab4.5_0002087g0050 Nicotiana tabacum HOM05D001960 ORTHO05D004348 4.5e-15 85.9 76 63.2
Medtr7g009420 Medicago truncatula HOM05D000053 ORTHO05D000035 1.5e-10 70.9 38 89.5
Haze_14570 Corylus avellana HOM05D001960 ORTHO05D004348 1.1e-08 64.7 52 59.6
SHI04268 Sapria himalayana HOM05D001960 ORTHO05D004348 1.5e-07 60.8 30 90.0
Medtr7g009520 Medicago truncatula HOM05D001960 ORTHO05D000035 7.7e-07 58.5 32 84.4


User provided reference genes

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