Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI06540 Sapria himalayana HOM05D003313 ORTHO05D004217 3.4e-64 248.1 115 100.0
Oeu016865.1 Olea europaea HOM05D003313 ORTHO05D004217 2.6e-32 142.1 78 83.3
Hund24556 Selenicereus undatus HOM05D003313 ORTHO05D004217 1.0e-31 140.2 78 83.3
Lsat_1_v5_gn_7_68120 Lactuca sativa HOM05D003313 ORTHO05D004217 2.2e-31 139.0 78 82.1
EL10Ac3g07331 Beta vulgaris HOM05D003313 ORTHO05D004217 2.9e-31 138.7 78 82.1
AUR62018429 Chenopodium quinoa HOM05D003313 ORTHO05D004217 2.9e-31 138.7 78 82.1
AUR62021005 Chenopodium quinoa HOM05D003313 ORTHO05D004217 3.8e-31 138.3 78 80.8
DCAR_029311 Daucus carota HOM05D003313 ORTHO05D004217 4.9e-31 137.9 73 84.9
DCAR_032259 Daucus carota HOM05D003313 ORTHO05D004217 6.5e-31 137.5 78 80.8
CANSAT01G1610 Cannabis sativa HOM05D003313 ORTHO05D004217 8.4e-31 137.1 72 86.1
Cpa.g.sc17.19 Carica papaya HOM05D003313 ORTHO05D004217 8.4e-31 137.1 78 79.5
HanXRQChr15g0468281 Helianthus annuus HOM05D003313 ORTHO05D004217 8.4e-31 137.1 78 80.8
Lj9C240T5 Lonicera japonica HOM05D003313 ORTHO05D004217 8.4e-31 137.1 78 80.8
MD05G1154700 Malus domestica HOM05D003313 ORTHO05D004217 8.4e-31 137.1 78 79.5
Cfa004406 Carpinus fangiana HOM05D003313 ORTHO05D004217 1.1e-30 136.7 72 84.7
CiPaw.01G000300 Carya illinoinensis HOM05D003313 ORTHO05D004217 1.1e-30 136.7 72 84.7
Haze_14997 Corylus avellana HOM05D003313 ORTHO05D004217 1.1e-30 136.7 72 84.7
Duzib150G0949 Durio zibethinus HOM05D003313 ORTHO05D004217 1.4e-30 136.3 72 86.1
FvH4_2g17560 Fragaria vesca HOM05D003313 ORTHO05D004217 1.4e-30 136.3 78 79.5
FAN15G1274 Fragaria x ananassa HOM05D003313 ORTHO05D004217 1.4e-30 136.3 78 79.5
FAN24G1237 Fragaria x ananassa HOM05D003313 ORTHO05D004217 1.4e-30 136.3 78 79.5
Thecc.09G202800 Theobroma cacao HOM05D003313 ORTHO05D004217 1.4e-30 136.3 72 86.1
CAN.G1379.33 Capsicum annuum HOM05D003313 ORTHO05D004217 1.9e-30 136.0 78 79.5
Prupe.8G187800 Prunus persica HOM05D003313 ORTHO05D004217 1.9e-30 136.0 72 84.7
QL11p018449 Quercus lobata HOM05D003313 ORTHO05D004217 1.9e-30 136.0 72 84.7
Solyc01g102510.4 Solanum lycopersicum HOM05D003313 ORTHO05D004217 1.9e-30 136.0 78 79.5
Sopen01g044950 Solanum pennellii HOM05D003313 ORTHO05D004217 1.9e-30 136.0 78 79.5
PGSC0003DMG400018227 Solanum tuberosum HOM05D003313 ORTHO05D004217 1.9e-30 136.0 78 79.5
Aqoxy1G01346 Aquilegia oxysepala HOM05D003313 ORTHO05D004217 2.5e-30 135.6 78 76.9
Cc02_g36830 Coffea canephora HOM05D003313 ORTHO05D004217 2.5e-30 135.6 72 84.7
MD10G1149000 Malus domestica HOM05D003313 ORTHO05D004217 2.5e-30 135.6 73 84.9
TAR624G0023 Trochodendron aralioides HOM05D003313 ORTHO05D004217 2.5e-30 135.6 72 83.3
TAR624G1107 Trochodendron aralioides HOM05D003313 ORTHO05D004217 2.5e-30 135.6 72 83.3
vmacro01642 Vaccinium macrocarpon HOM05D003313 ORTHO05D004217 2.5e-30 135.6 74 82.4
Ciclev10018511m.g Citrus clementina HOM05D003313 ORTHO05D004217 3.2e-30 135.2 70 87.1
DCAR_029787 Daucus carota HOM05D003313 ORTHO05D004217 3.2e-30 135.2 70 87.1
Nitab4.5_0000399g0070 Nicotiana tabacum HOM05D003313 ORTHO05D004217 3.2e-30 135.2 73 82.2
RcHm_v2.0_Chr6g0282501 Rosa chinensis HOM05D003313 ORTHO05D004217 3.2e-30 135.2 78 78.2
SalBow4G0229 Salvia bowleyana HOM05D003313 ORTHO05D004217 3.2e-30 135.2 78 79.5
SalBow4G1329 Salvia bowleyana HOM05D003313 ORTHO05D004217 3.2e-30 135.2 78 79.5
GSVIVG01029823001 Vitis vinifera HOM05D003313 ORTHO05D004217 3.2e-30 135.2 72 83.3
BcaC04g23548 Brassica carinata HOM05D003313 ORTHO05D004217 4.2e-30 134.8 78 78.2
A09p06410 Brassica napus HOM05D003313 ORTHO05D004217 4.2e-30 134.8 78 78.2
C09p07140 Brassica napus HOM05D003313 ORTHO05D004217 4.2e-30 134.8 78 78.2
BolC9t53629H Brassica oleracea HOM05D003313 ORTHO05D004217 4.2e-30 134.8 78 78.2
BraA09t36285Z Brassica rapa HOM05D003313 ORTHO05D004217 4.2e-30 134.8 78 78.2
Peaxi162Scf00071g00133 Petunia axillaris HOM05D003313 ORTHO05D004217 4.2e-30 134.8 78 78.2
Sc10g0005440 Simmondsia chinensis HOM05D003313 ORTHO05D004217 4.2e-30 134.8 78 78.2
SGA_v2.0_scaffold311G48230 Striga asiatica HOM05D003313 ORTHO05D004217 4.2e-30 134.8 72 83.3
Atru.chr3.2031 Acer truncatum HOM05D003313 ORTHO05D004217 5.5e-30 134.4 72 83.3
AL6G36310 Arabidopsis lyrata HOM05D003313 ORTHO05D004217 5.5e-30 134.4 78 78.2
AT5G24710 Arabidopsis thaliana HOM05D003313 ORTHO05D004217 5.5e-30 134.4 78 78.2
Thhalv10003520m.g Eutrema salsugineum HOM05D003313 ORTHO05D004217 5.5e-30 134.4 78 78.2
MBI07_g10943_MAGBIO Magnolia biondii HOM05D003313 ORTHO05D004217 5.5e-30 134.4 70 85.7
Nn3g20244 Nelumbo nucifera HOM05D003313 ORTHO05D004217 5.5e-30 134.4 78 76.9
PSO675G1011 Papaver somniferum HOM05D003313 ORTHO05D004217 5.5e-30 134.4 72 83.3
Sp2g22700 Schrenkiella parvula HOM05D003313 ORTHO05D004217 5.5e-30 134.4 78 78.2
Dinv30970 Davidia involucrata HOM05D003313 ORTHO05D004217 7.1e-30 134.0 72 84.7
Aa31LG11G3950 Aethionema arabicum HOM05D003313 ORTHO05D004217 9.3e-30 133.7 78 78.2
MSTRG.27897 Avicennia marina HOM05D003313 ORTHO05D004217 9.3e-30 133.7 78 76.9
THA.LOC104814960 Tarenaya hassleriana HOM05D003313 ORTHO05D004217 9.3e-30 133.7 78 79.5
BcaNung01252 Brassica carinata HOM05D003313 ORTHO05D004217 1.2e-29 133.3 78 76.9
A06p35540 Brassica napus HOM05D003313 ORTHO05D004217 1.2e-29 133.3 78 76.9
C07p43000 Brassica napus HOM05D003313 ORTHO05D004217 1.2e-29 133.3 78 76.9
BolC7t44829H Brassica oleracea HOM05D003313 ORTHO05D004217 1.2e-29 133.3 78 76.9
BraA06t26479Z Brassica rapa HOM05D003313 ORTHO05D004217 1.2e-29 133.3 78 76.9
CSS0016348 Camellia sinensis var. sinensis HOM05D003313 ORTHO05D004217 1.2e-29 133.3 72 83.3
CSS0044155 Camellia sinensis var. sinensis HOM05D003313 ORTHO05D004217 1.2e-29 133.3 72 83.3
Migut.B00692 Erythranthe guttata HOM05D003313 ORTHO05D004217 1.2e-29 133.3 72 81.9
Hma1.2p1_0052F.1_g030180 Hydrangea macrophylla HOM05D003313 ORTHO05D004217 1.2e-29 133.3 78 79.5
ECA240G0535 Erigeron canadensis HOM05D003313 ORTHO05D004217 1.6e-29 132.9 70 84.3
Nitab4.5_0004090g0090 Nicotiana tabacum HOM05D003313 ORTHO05D004217 1.6e-29 132.9 72 81.9
CARHR188770 Cardamine hirsuta HOM05D003313 ORTHO05D004217 2.1e-29 132.5 75 80.0
Phvul.001G220300 Phaseolus vulgaris HOM05D003313 ORTHO05D004217 2.1e-29 132.5 78 76.9
Potri.006G081800 Populus trichocarpa HOM05D003313 ORTHO05D004217 2.1e-29 132.5 72 83.3
Sabra06G0061800 Salix brachista HOM05D003313 ORTHO05D004217 2.1e-29 132.5 72 83.3
Ah.13g077320 Amaranthus hybridus HOM05D003313 ORTHO05D004217 2.7e-29 132.1 78 78.2
CSS0008361 Camellia sinensis var. sinensis HOM05D003313 ORTHO05D004217 2.7e-29 132.1 78 76.9
CSS0011425 Camellia sinensis var. sinensis HOM05D003313 ORTHO05D004217 2.7e-29 132.1 78 76.9
FAN27G0645 Fragaria x ananassa HOM05D003313 ORTHO05D004217 2.7e-29 132.1 78 78.2
FAN27G0740 Fragaria x ananassa HOM05D003313 ORTHO05D004217 2.7e-29 132.1 78 78.2
Lj5C312G5 Lonicera japonica HOM05D003313 ORTHO05D004217 2.7e-29 132.1 73 78.1
PSO541G4460 Papaver somniferum HOM05D003313 ORTHO05D004217 2.7e-29 132.1 78 76.9
Rhsim11G0111700 Rhododendron simsii HOM05D003313 ORTHO05D004217 2.7e-29 132.1 72 83.3
Gohir.A08G082000 Gossypium hirsutum HOM05D003313 ORTHO05D004217 3.5e-29 131.7 72 80.6
TWI38G1822 Tripterygium wilfordii HOM05D003313 ORTHO05D004217 3.5e-29 131.7 72 81.9
HPP92_021469 Vanilla planifolia HOM05D003313 ORTHO05D004217 3.5e-29 131.7 78 76.9
MELO3C021123.2 Cucumis melo HOM05D003313 ORTHO05D004217 4.6e-29 131.3 70 82.9
CsaV3_7G026710 Cucumis sativus L. HOM05D003313 ORTHO05D004217 4.6e-29 131.3 70 82.9
Lj1g0026129 Lotus japonicus HOM05D003313 ORTHO05D004217 4.6e-29 131.3 78 76.9
Manes.11G105500 Manihot esculenta HOM05D003313 ORTHO05D004217 4.6e-29 131.3 78 75.6
Sed0021054 Sechium edule HOM05D003313 ORTHO05D004217 4.6e-29 131.3 70 82.9
ClCG09G008380 Citrullus lanatus HOM05D003313 ORTHO05D004217 6.0e-29 131.0 70 81.4
Gohir.D08G091400 Gossypium hirsutum HOM05D003313 ORTHO05D004217 6.0e-29 131.0 72 79.2
Gorai.004G096900 Gossypium raimondii HOM05D003313 ORTHO05D004217 6.0e-29 131.0 72 79.2
Carub.0006s2256 Capsella rubella HOM05D003313 ORTHO05D004217 1.0e-28 130.2 78 74.4
CDE09G1422 Ceratophyllum demersum HOM05D003313 ORTHO05D004217 1.0e-28 130.2 72 79.2
Hund19080 Selenicereus undatus HOM05D003313 ORTHO05D004217 1.0e-28 130.2 78 75.6
Zm00001eb359400 Zea mays HOM05D003313 ORTHO05D004217 1.0e-28 130.2 70 85.7
SEGI_06427 Sequoiadendron giganteum HOM05D003313 ORTHO05D004217 1.3e-28 129.8 72 79.2
Glyma.03G226400 Glycine max HOM05D003313 ORTHO05D004217 1.8e-28 129.4 78 74.4
Glyma.19G223400 Glycine max HOM05D003313 ORTHO05D004217 1.8e-28 129.4 78 74.4
HanXRQChr14g0448821 Helianthus annuus HOM05D003313 ORTHO05D004217 1.8e-28 129.4 73 80.8
Nitab4.5_0005421g0020 Nicotiana tabacum HOM05D003313 ORTHO05D004217 1.8e-28 129.4 78 74.4
Nitab4.5_0011890g0010 Nicotiana tabacum HOM05D003313 ORTHO05D004217 1.8e-28 129.4 78 74.4
TPR.G8375 Trifolium pratense HOM05D003313 ORTHO05D004217 1.8e-28 129.4 78 76.9
ATR0620G123 Amborella trichopoda HOM05D003313 ORTHO05D004217 3.0e-28 128.6 78 70.5
Medtr7g111080 Medicago truncatula HOM05D003313 ORTHO05D004217 3.0e-28 128.6 78 75.6
Os01g0653800 Oryza sativa ssp. japonica HOM05D003313 ORTHO05D004217 3.9e-28 128.3 78 75.6
Zm00001eb158110 Zea mays HOM05D003313 ORTHO05D004217 3.9e-28 128.3 70 84.3
Ca_09260_v3 Cicer arietinum L. HOM05D003313 ORTHO05D004217 5.1e-28 127.9 78 74.4
Lalb_Chr15g0077831 Lupinus albus HOM05D003313 ORTHO05D004217 5.1e-28 127.9 78 74.4
VMungo1383G1216 Vigna mungo HOM05D003313 ORTHO05D004217 5.1e-28 127.9 70 81.4
Gohir.D08G026350 Gossypium hirsutum HOM05D003313 ORTHO05D004217 8.7e-28 127.1 70 80.0
Gorai.004G022800 Gossypium raimondii HOM05D003313 ORTHO05D004217 8.7e-28 127.1 70 80.0
Lalb_Chr18g0046271 Lupinus albus HOM05D003313 ORTHO05D004217 8.7e-28 127.1 78 73.1
Psat3g015640 Pisum sativum HOM05D003313 ORTHO05D004217 8.7e-28 127.1 78 74.4
SMO116G0300 Selaginella moellendorffii HOM05D003313 ORTHO05D004217 4.5e-24 114.8 78 65.4
Pp3c1_36370 Physcomitrium patens HOM05D003313 ORTHO05D004217 1.7e-23 112.8 72 68.1
AagrBONN_evm.TU.Sc2ySwM_228.3123 Anthoceros agrestis HOM05D003313 ORTHO05D004217 1.9e-22 109.4 70 65.7
unitig_699.g19829 Utricularia gibba HOM05D003313 ORTHO05D004217 1.3e-20 103.2 54 81.5
Mapoly0031s0124 Marchantia polymorpha HOM05D003313 ORTHO05D004217 3.3e-19 98.6 65 66.2
CBR_g3034 Chara braunii HOM05D003313 ORTHO05D004217 4.5e-16 88.2 69 52.2
Peaxi162Scf00194g00629 Petunia axillaris HOM05D003313 ORTHO05D004217 3.8e-15 85.1 52 65.4
Cre12.g535350 Chlamydomonas reinhardtii HOM05D003313 ORTHO05D004217 6.1e-13 77.8 82 41.5


User provided reference genes

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