Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI06273 Sapria himalayana HOM05D000002 ORTHO05D000047 2.7e-48 194.9 92 100.0
SHI09922 Sapria himalayana HOM05D000002 ORTHO05D000047 3.0e-31 138.3 79 81.0
SHI12088 Sapria himalayana HOM05D000002 ORTHO05D000047 8.8e-31 136.7 82 81.7
SHI34389 Sapria himalayana HOM05D000002 ORTHO05D000047 4.8e-29 131.0 81 80.2
SHI04532 Sapria himalayana HOM05D000002 ORTHO05D000047 3.1e-28 128.3 79 81.0
SHI10964 Sapria himalayana HOM05D000002 ORTHO05D000047 5.3e-28 127.5 81 80.2
Migut.F00764 Erythranthe guttata HOM05D000002 ORTHO05D000047 1.7e-26 122.5 84 72.6
Migut.G01342 Erythranthe guttata HOM05D000002 ORTHO05D000047 1.7e-26 122.5 84 72.6
SHI34106 Sapria himalayana HOM05D000002 ORTHO05D000047 5.0e-26 120.9 81 76.5
SHI24099 Sapria himalayana HOM05D000002 ORTHO05D000047 4.2e-25 117.9 82 74.4
SHI03848 Sapria himalayana HOM05D000002 ORTHO05D000047 3.6e-24 114.8 79 74.7
SHI11030 Sapria himalayana HOM05D000002 ORTHO05D000047 1.8e-23 112.5 69 81.2
Migut.G00569 Erythranthe guttata HOM05D000002 ORTHO05D000047 1.5e-22 109.4 79 65.8
SHI00431 Sapria himalayana HOM05D000002 ORTHO05D000047 1.5e-22 109.4 126 50.0
SHI19772 Sapria himalayana HOM05D000002 ORTHO05D000047 1.5e-22 109.4 81 75.3
SHI14623 Sapria himalayana HOM05D000002 ORTHO05D000047 3.4e-22 108.2 92 64.1
SHI22972 Sapria himalayana HOM05D000002 ORTHO05D000047 3.4e-22 108.2 72 75.0
SHI23543 Sapria himalayana HOM05D000002 ORTHO05D000047 2.2e-21 105.5 63 77.8
SHI33544 Sapria himalayana HOM05D000002 ORTHO05D000047 1.0e-18 96.7 79 65.8
SHI01905 Sapria himalayana HOM05D000002 ORTHO05D000047 1.3e-18 96.3 78 62.8
SHI01105 Sapria himalayana HOM05D000002 ORTHO05D000047 2.2e-18 95.5 77 64.9
Hma1.2p1_1936F.1_g308230 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.8e-18 94.7 126 44.4
SHI22247 Sapria himalayana HOM05D000002 ORTHO05D009932 2.1e-16 89.0 52 80.8
SHI30675 Sapria himalayana HOM05D000002 ORTHO05D000047 2.1e-16 89.0 56 80.4
TPR.G33357 Trifolium pratense HOM05D000002 ORTHO05D000047 2.8e-16 88.6 63 61.9
SHI14888 Sapria himalayana HOM05D000002 ORTHO05D000047 4.7e-16 87.8 50 86.0
Hma1.2p1_1251F.1_g270340 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.4e-15 86.3 100 53.0
SHI20116 Sapria himalayana HOM05D000002 ORTHO05D000047 1.4e-15 86.3 51 78.4
Hma1.2p1_0088F.1_g044990 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.8e-15 85.9 115 44.3
SHI07485 Sapria himalayana HOM05D000002 ORTHO05D000047 3.0e-15 85.1 81 56.8
SHI04419 Sapria himalayana HOM05D000105 ORTHO05D000001 5.7e-14 80.9 47 78.7
SHI14828 Sapria himalayana HOM05D000035 ORTHO05D000047 1.3e-13 79.7 56 75.0
SHI13376 Sapria himalayana HOM05D000002 ORTHO05D000047 1.7e-13 79.3 50 80.0
SHI01063 Sapria himalayana HOM05D000002 ORTHO05D000047 6.3e-13 77.4 50 78.0
HPP92_018323 Vanilla planifolia HOM05D000002 ORTHO05D000047 8.3e-13 77.0 63 58.7
SHI23066 Sapria himalayana HOM05D000002 ORTHO05D000047 3.1e-12 75.1 49 73.5
SHI28245 Sapria himalayana HOM05D000002 ORTHO05D025741 1.6e-11 72.8 51 70.6
Rhsim05G0070200 Rhododendron simsii HOM05D000002 ORTHO05D000047 7.8e-11 70.5 58 58.6
SHI25176 Sapria himalayana HOM05D000002 ORTHO05D000047 1.0e-10 70.1 49 71.4
Rhsim02G0004200 Rhododendron simsii HOM05D000002 ORTHO05D000047 3.8e-10 68.2 65 52.3
MD09G1165800 Malus domestica HOM05D000002 ORTHO05D000047 5.0e-10 67.8 60 51.7
SHI11798 Sapria himalayana HOM05D000002 ORTHO05D000047 5.0e-10 67.8 43 74.4
SHI10108 Sapria himalayana HOM05D000002 ORTHO05D000047 8.6e-10 67.0 50 68.0
SHI11985 Sapria himalayana HOM05D000002 ORTHO05D000001 8.6e-10 67.0 39 74.4
Rhsim07G0134800 Rhododendron simsii HOM05D000002 ORTHO05D000047 1.1e-09 66.6 58 53.4
SHI15215 Sapria himalayana HOM05D000002 ORTHO05D000047 1.9e-09 65.9 79 49.4
Cpa.g.sc1.53 Carica papaya HOM05D000002 ORTHO05D000047 2.5e-09 65.5 46 69.6
AUR62037450 Chenopodium quinoa HOM05D000002 ORTHO05D000001 5.6e-09 64.3 79 40.5
Hma1.2p1_2308F.1_g319490 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 5.6e-09 64.3 65 50.8
HPP92_023007 Vanilla planifolia HOM05D000002 ORTHO05D000047 5.6e-09 64.3 63 47.6
SHI18885 Sapria himalayana HOM05D000002 ORTHO05D000047 1.6e-08 62.8 36 77.8
SHI35762 Sapria himalayana HOM05D000002 ORTHO05D000047 1.6e-08 62.8 36 77.8
Hma1.2p1_0578F.1_g182525 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.6e-08 61.6 65 46.2
Sopen09g026920 Solanum pennellii HOM05D000002 ORTHO05D000001 8.0e-08 60.5 78 41.0
CANSAT50G0003 Cannabis sativa HOM05D000002 ORTHO05D000047 1.0e-07 60.1 65 44.6
CANSAT54G0982 Cannabis sativa HOM05D000002 ORTHO05D000047 1.0e-07 60.1 65 44.6
Hma1.2p1_0222F.1_g093830 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.0e-07 60.1 65 44.6
SHI04337 Sapria himalayana HOM05D000002 ORTHO05D000001 1.0e-07 60.1 37 78.4
EL10Ac5g11363 Beta vulgaris HOM05D000002 ORTHO05D000047 1.4e-07 59.7 70 45.7
FvH4_2g08331 Fragaria vesca HOM05D000002 ORTHO05D000047 1.8e-07 59.3 39 69.2
Sabra16G0048200 Salix brachista HOM05D000002 ORTHO05D000047 2.3e-07 58.9 65 41.5
TWI79G1246 Tripterygium wilfordii HOM05D000002 ORTHO05D000047 2.3e-07 58.9 74 39.2
Atru.chr3.2818 Acer truncatum HOM05D000002 ORTHO05D000047 3.0e-07 58.5 65 43.1
CANSAT01G0665 Cannabis sativa HOM05D000002 ORTHO05D000047 3.0e-07 58.5 58 43.1
Rhsim06G0010400 Rhododendron simsii HOM05D000002 ORTHO05D000047 3.0e-07 58.5 65 44.6
Rhsim12G0120200 Rhododendron simsii HOM05D000002 ORTHO05D000047 3.0e-07 58.5 65 44.6
TWI15G0350 Tripterygium wilfordii HOM05D000002 ORTHO05D000047 3.0e-07 58.5 74 39.2
CANSAT21G2108 Cannabis sativa HOM05D000002 ORTHO05D000047 4.0e-07 58.2 64 45.3
CANSAT54G1042 Cannabis sativa HOM05D000002 ORTHO05D000047 4.0e-07 58.2 65 44.6
Ciclev10003611m.g Citrus clementina HOM05D000002 ORTHO05D000047 5.2e-07 57.8 57 45.6
Sopen03g011620 Solanum pennellii HOM05D000002 ORTHO05D000001 5.2e-07 57.8 77 45.5
Rhsim10G0073900 Rhododendron simsii HOM05D000002 ORTHO05D000047 6.8e-07 57.4 57 43.9
Sabra11G0082800 Salix brachista HOM05D000002 ORTHO05D000047 8.9e-07 57.0 64 42.2
Rhsim07G0258800 Rhododendron simsii HOM05D000002 ORTHO05D000047 1.5e-06 56.2 65 38.5
SHI38825 Sapria himalayana HOM05D000002 ORTHO05D000047 1.5e-06 56.2 38 73.7
Sopen00g013490 Solanum pennellii HOM05D000002 ORTHO05D000047 1.5e-06 56.2 53 43.4
Sopen10g022800 Solanum pennellii HOM05D000002 ORTHO05D000001 1.5e-06 56.2 47 59.6
TPR.G40123 Trifolium pratense HOM05D000002 ORTHO05D000001 1.5e-06 56.2 92 32.6
CANSAT01G0089 Cannabis sativa HOM05D000002 ORTHO05D000047 2.0e-06 55.8 65 43.1
Sopen04g024650 Solanum pennellii HOM05D000002 ORTHO05D000001 2.0e-06 55.8 47 59.6
Sopen08g009030 Solanum pennellii HOM05D000002 ORTHO05D000001 2.0e-06 55.8 47 59.6
Sopen11g023580 Solanum pennellii HOM05D000002 ORTHO05D000047 2.0e-06 55.8 53 47.2
Sopen12g008410 Solanum pennellii HOM05D000002 ORTHO05D000001 2.0e-06 55.8 70 35.7
Sopen01g006610 Solanum pennellii HOM05D000002 ORTHO05D000001 2.6e-06 55.5 65 41.5
Sopen03g004910 Solanum pennellii HOM05D000002 ORTHO05D000001 2.6e-06 55.5 42 57.1
Sopen10g014380 Solanum pennellii HOM05D000002 ORTHO05D000047 2.6e-06 55.5 64 42.2
TPR.G13341 Trifolium pratense HOM05D000002 ORTHO05D000047 2.6e-06 55.5 92 33.7
TPR.G8352 Trifolium pratense HOM05D000002 ORTHO05D000047 2.6e-06 55.5 92 32.6
Sopen03g024710 Solanum pennellii HOM05D000002 ORTHO05D000047 3.4e-06 55.1 45 51.1
CANSAT11G2223 Cannabis sativa HOM05D000002 ORTHO05D000047 4.4e-06 54.7 57 43.9
AUR62025694 Chenopodium quinoa HOM05D000002 ORTHO05D000047 4.4e-06 54.7 70 38.6
AUR62041465 Chenopodium quinoa HOM05D000002 ORTHO05D000047 4.4e-06 54.7 70 40.0
Rhsim03G0137800 Rhododendron simsii HOM05D001360 ORTHO05D001231 4.4e-06 54.7 65 41.5
Rhsim10G0196500 Rhododendron simsii HOM05D000002 ORTHO05D000047 4.4e-06 54.7 59 49.2
SHI06454 Sapria himalayana HOM05D011147 ORTHO05D000047 4.4e-06 54.7 28 89.3
Sopen02g022150 Solanum pennellii HOM05D000002 ORTHO05D000001 4.4e-06 54.7 71 32.4
Sopen07g021240 Solanum pennellii HOM05D000002 ORTHO05D000047 4.4e-06 54.7 65 41.5
Sopen08g020600 Solanum pennellii HOM05D000002 ORTHO05D000001 4.4e-06 54.7 64 39.1
Cpa.g.sc56.21 Carica papaya HOM05D000002 ORTHO05D000047 5.7e-06 54.3 65 40.0
AUR62015352 Chenopodium quinoa HOM05D000002 ORTHO05D000047 5.7e-06 54.3 85 36.5
FvH4_7g23352 Fragaria vesca HOM05D000002 ORTHO05D000047 5.7e-06 54.3 64 40.6
Hma1.2p1_0417F.1_g148860 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 5.7e-06 54.3 40 50.0
Rhsim11G0081200 Rhododendron simsii HOM05D000002 ORTHO05D000047 5.7e-06 54.3 65 38.5
Sopen00g009270 Solanum pennellii HOM05D000002 ORTHO05D000001 5.7e-06 54.3 53 43.4
Sopen08g020040 Solanum pennellii HOM05D000002 ORTHO05D000001 5.7e-06 54.3 70 35.7
Sopen12g032940 Solanum pennellii HOM05D000002 ORTHO05D000001 5.7e-06 54.3 53 43.4
TPR.G14071 Trifolium pratense HOM05D000002 ORTHO05D000047 5.7e-06 54.3 76 34.2
Atru.chr12.1772 Acer truncatum HOM05D000002 ORTHO05D000047 7.5e-06 53.9 58 43.1
EL10Ac9g21228 Beta vulgaris HOM05D000002 ORTHO05D000047 7.5e-06 53.9 57 42.1
FvH4_6g40340 Fragaria vesca HOM05D000258 ORTHO05D000153 7.5e-06 53.9 48 52.1
TPR.G38892 Trifolium pratense HOM05D000002 ORTHO05D000047 7.5e-06 53.9 92 31.5
Atru.chr9.683 Acer truncatum HOM05D000002 ORTHO05D000047 9.8e-06 53.5 57 45.6
Rhsim12G0065600 Rhododendron simsii HOM05D000002 ORTHO05D000047 9.8e-06 53.5 63 44.4
Sopen00g012190 Solanum pennellii HOM05D000002 ORTHO05D000047 9.8e-06 53.5 54 40.7
Sopen02g027590 Solanum pennellii HOM05D000002 ORTHO05D000001 9.8e-06 53.5 64 37.5
Sopen03g004470 Solanum pennellii HOM05D000002 ORTHO05D000001 9.8e-06 53.5 64 37.5
Sopen03g033260 Solanum pennellii HOM05D000002 ORTHO05D000001 9.8e-06 53.5 45 48.9
Sopen08g014720 Solanum pennellii HOM05D000002 ORTHO05D000001 9.8e-06 53.5 54 40.7
Sopen09g026340 Solanum pennellii HOM05D000002 ORTHO05D000002 9.8e-06 53.5 65 38.5


User provided reference genes

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