Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI06117 Sapria himalayana HOM05D001837 ORTHO05D003156 7.3e-71 270.4 132 100.0
Manes.05G103601 Manihot esculenta HOM05D001837 ORTHO05D003156 3.1e-29 132.1 107 57.0
Manes.01G034600 Manihot esculenta HOM05D001837 ORTHO05D003156 3.2e-26 122.1 103 55.3
Potri.008G088200 Populus trichocarpa HOM05D001837 ORTHO05D003156 1.5e-23 113.2 109 49.5
Haze_11995 Corylus avellana HOM05D001837 ORTHO05D003156 4.4e-23 111.7 106 50.0
Potri.010G167300 Populus trichocarpa HOM05D001837 ORTHO05D003156 1.3e-22 110.2 109 49.5
Sabra08G0065900 Salix brachista HOM05D001837 ORTHO05D003156 2.2e-22 109.4 107 52.3
Sabra10G0127100 Salix brachista HOM05D001837 ORTHO05D003156 3.7e-22 108.6 108 49.1
Cpa.g.sc1.45 Carica papaya HOM05D001837 ORTHO05D003156 1.4e-21 106.7 107 48.6
MD16G1070700 Malus domestica HOM05D001837 ORTHO05D003156 9.1e-21 104.0 105 46.7
VMungo0251G2482 Vigna mungo HOM05D001837 ORTHO05D003156 1.3e-19 100.1 101 47.5
CiPaw.06G086700 Carya illinoinensis HOM05D001837 ORTHO05D003156 2.2e-19 99.4 108 43.5
Prupe.1G276600 Prunus persica HOM05D001837 ORTHO05D003156 5.0e-19 98.2 105 44.8
Ciclev10031963m.g Citrus clementina HOM05D001837 ORTHO05D003156 6.5e-19 97.8 105 46.7
FAN07G1123 Fragaria x ananassa HOM05D001837 ORTHO05D003156 6.5e-19 97.8 107 45.8
FAN22G1026 Fragaria x ananassa HOM05D001837 ORTHO05D003156 1.1e-18 97.1 119 42.9
QL03p068624 Quercus lobata HOM05D001837 ORTHO05D003156 1.4e-18 96.7 107 43.9
Thecc.02G343900 Theobroma cacao HOM05D001837 ORTHO05D003156 1.4e-18 96.7 104 46.2
FAN12G3985 Fragaria x ananassa HOM05D001837 ORTHO05D003156 3.2e-18 95.5 106 46.2
QL05p030086 Quercus lobata HOM05D001837 ORTHO05D003156 4.2e-18 95.1 103 44.7
FvH4_4g31160 Fragaria vesca HOM05D001837 ORTHO05D003156 7.2e-18 94.4 106 45.3
MD13G1070300 Malus domestica HOM05D001837 ORTHO05D003156 7.2e-18 94.4 105 42.9
TWI75G0812 Tripterygium wilfordii HOM05D001837 ORTHO05D003156 7.2e-18 94.4 107 43.9
CANSAT64G2867 Cannabis sativa HOM05D001837 ORTHO05D003156 9.4e-18 94.0 110 42.7
FAN17G3096 Fragaria x ananassa HOM05D001837 ORTHO05D003156 9.4e-18 94.0 107 45.8
CiPaw.05G133000 Carya illinoinensis HOM05D001837 ORTHO05D003156 1.2e-17 93.6 106 42.5
RcHm_v2.0_Chr4g0439551 Rosa chinensis HOM05D001837 ORTHO05D003156 1.6e-17 93.2 106 43.4
TWI31G0386 Tripterygium wilfordii HOM05D001837 ORTHO05D003156 1.6e-17 93.2 107 43.0
Duzib248G0439 Durio zibethinus HOM05D001837 ORTHO05D003156 2.1e-17 92.8 113 42.5
Glyma.07G228900 Glycine max HOM05D001837 ORTHO05D003156 2.1e-17 92.8 104 43.3
COL.COLO4_22947 Corchorus olitorius HOM05D001837 ORTHO05D003156 4.7e-17 91.7 116 42.2
Lalb_Chr17g0340811 Lupinus albus HOM05D001837 ORTHO05D003156 6.1e-17 91.3 105 42.9
Lj4g0016263 Lotus japonicus HOM05D001837 ORTHO05D003156 3.0e-16 89.0 102 42.2
Phvul.002G172350 Phaseolus vulgaris HOM05D001837 ORTHO05D003156 5.2e-16 88.2 103 40.8
Ca_18825_v3 Cicer arietinum L. HOM05D001837 ORTHO05D003156 6.7e-16 87.8 84 42.9
Gohir.D02G126600 Gossypium hirsutum HOM05D001837 ORTHO05D003156 1.1e-15 87.0 106 40.6
Gorai.005G142100 Gossypium raimondii HOM05D001837 ORTHO05D003156 1.1e-15 87.0 106 40.6
Gohir.A03G101800 Gossypium hirsutum HOM05D001837 ORTHO05D003156 2.0e-15 86.3 106 40.6
Lalb_Chr10g0098411 Lupinus albus HOM05D001837 ORTHO05D003156 2.6e-15 85.9 101 41.6
TAR374G0034 Trochodendron aralioides HOM05D001837 ORTHO05D003156 3.3e-15 85.5 103 41.7
TAR622G0453 Trochodendron aralioides HOM05D001837 ORTHO05D003156 1.3e-14 83.6 108 38.9
MELO3C012107.2 Cucumis melo HOM05D001837 ORTHO05D003156 1.7e-14 83.2 103 43.7
Nn4g23208 Nelumbo nucifera HOM05D001837 ORTHO05D003156 2.4e-13 79.3 105 39.0
Nn3g17279 Nelumbo nucifera HOM05D001837 ORTHO05D003156 4.1e-13 78.6 103 38.8
ClCG05G024160 Citrullus lanatus HOM05D001837 ORTHO05D003156 7.0e-13 77.8 103 40.8
Duzib268G0595 Durio zibethinus HOM05D001837 ORTHO05D003156 1.6e-12 76.6 104 40.4
Nn4g23210 Nelumbo nucifera HOM05D001837 ORTHO05D003156 1.6e-12 76.6 100 39.0
CsaV3_5G032860 Cucumis sativus L. HOM05D001837 ORTHO05D003156 3.5e-12 75.5 103 40.8
Atru.chr11.1764 Acer truncatum HOM05D001837 ORTHO05D003156 1.3e-11 73.6 105 41.9
GSVIVG01007989001 Vitis vinifera HOM05D001837 ORTHO05D003156 3.8e-11 72.0 87 42.5
Gohir.A13G076400 Gossypium hirsutum HOM05D001837 ORTHO05D003156 6.5e-11 71.2 103 37.9
PSO832G0505 Papaver somniferum HOM05D001837 ORTHO05D003156 8.5e-11 70.9 115 35.7
Gohir.D13G076000 Gossypium hirsutum HOM05D001837 ORTHO05D003156 2.5e-10 69.3 103 36.9
Gorai.013G086600 Gossypium raimondii HOM05D001837 ORTHO05D003156 2.5e-10 69.3 103 36.9
Psat2g117920 Pisum sativum HOM05D001837 ORTHO05D003156 5.5e-10 68.2 116 37.1
Dinv16662 Davidia involucrata HOM05D001837 ORTHO05D003156 9.4e-10 67.4 115 33.9
PSO013G0078 Papaver somniferum HOM05D001837 ORTHO05D003156 2.1e-09 66.2 115 33.9
Aqoxy3G03432 Aquilegia oxysepala HOM05D001837 ORTHO05D003156 2.7e-09 65.9 103 37.9
MBI05_g10771_MAGBIO Magnolia biondii HOM05D001837 ORTHO05D003156 6.1e-09 64.7 103 34.0
Medtr5g041650 Medicago truncatula HOM05D001837 ORTHO05D003156 6.1e-09 64.7 106 39.6
Actinidia37619 Actinidia chinensis HOM05D001837 ORTHO05D003156 1.4e-08 63.5 87 35.6
Sed0013054 Sechium edule HOM05D001837 ORTHO05D003156 3.0e-08 62.4 101 39.6
arahy.Tifrunner.gnm1.ann1.GD5YP7 Arachis hypogaea HOM05D001837 ORTHO05D003156 4.0e-08 62.0 114 33.3
AUR62021664 Chenopodium quinoa HOM05D001837 ORTHO05D003156 1.5e-07 60.1 88 33.0
Duzib251G0307 Durio zibethinus HOM05D001837 ORTHO05D003156 1.5e-07 60.1 104 36.5
AUR62008429 Chenopodium quinoa HOM05D001837 ORTHO05D003156 2.0e-07 59.7 88 33.0
FAN08G1694 Fragaria x ananassa HOM05D004915 ORTHO05D006048 2.0e-07 59.7 91 34.1
arahy.Tifrunner.gnm1.ann1.PIZ1S4 Arachis hypogaea HOM05D001837 ORTHO05D003156 2.6e-07 59.3 110 34.5
FvH4_5g14780 Fragaria vesca HOM05D001837 ORTHO05D003156 7.5e-07 57.8 91 33.0
FAN13G2234 Fragaria x ananassa HOM05D004915 ORTHO05D006048 1.3e-06 57.0 91 33.0
FAN18G3490 Fragaria x ananassa HOM05D004915 ORTHO05D006048 4.8e-06 55.1 91 31.9
FAN04G1144 Fragaria x ananassa HOM05D004915 ORTHO05D006048 6.3e-06 54.7 80 33.8
Medtr4g081960 Medicago truncatula HOM05D002545 ORTHO05D002335 6.3e-06 54.7 53 41.5
Duzib068G1234 Durio zibethinus HOM05D001837 ORTHO05D003156 8.2e-06 54.3 107 30.8


User provided reference genes

Program Settings