Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI06054 Sapria himalayana HOM05D007116 ORTHO05D008255 5.0e-93 344.4 166 100.0
COL.COLO4_24546 Corchorus olitorius HOM05D004740 ORTHO05D008255 2.5e-23 112.8 65 76.9
Peaxi162Scf00389g00918 Petunia axillaris HOM05D007116 ORTHO05D008255 2.5e-23 112.8 62 79.0
Gohir.A07G116500 Gossypium hirsutum HOM05D007116 ORTHO05D008255 7.1e-23 111.3 58 82.8
Oeu059103.2 Olea europaea HOM05D007116 ORTHO05D008255 7.1e-23 111.3 58 82.8
Hund08379 Selenicereus undatus HOM05D007116 ORTHO05D008255 1.2e-22 110.5 62 77.4
Dinv31164 Davidia involucrata HOM05D007116 ORTHO05D008255 1.6e-22 110.2 58 81.0
Gohir.D07G120900 Gossypium hirsutum HOM05D007116 ORTHO05D008255 2.1e-22 109.8 58 81.0
Gorai.001G130300 Gossypium raimondii HOM05D007116 ORTHO05D008255 2.1e-22 109.8 58 81.0
Nitab4.5_0002129g0050 Nicotiana tabacum HOM05D007116 ORTHO05D008255 2.1e-22 109.8 63 76.2
SalBow3G4480 Salvia bowleyana HOM05D007116 ORTHO05D008255 2.1e-22 109.8 60 80.0
MD11G1130500 Malus domestica HOM05D007116 ORTHO05D008255 2.7e-22 109.4 58 81.0
MSTRG.21142 Avicennia marina HOM05D007116 ORTHO05D008255 3.5e-22 109.0 58 79.3
Rhsim01G0219200 Rhododendron simsii HOM05D007116 ORTHO05D008255 4.6e-22 108.6 60 80.0
Cfa011360 Carpinus fangiana HOM05D007116 ORTHO05D008255 6.1e-22 108.2 58 81.0
Nitab4.5_0001802g0040 Nicotiana tabacum HOM05D007116 ORTHO05D008255 6.1e-22 108.2 58 81.0
THA.LOC104826359 Tarenaya hassleriana HOM05D007116 ORTHO05D008255 6.1e-22 108.2 58 81.0
TAR633G2203 Trochodendron aralioides HOM05D007116 ORTHO05D008255 6.1e-22 108.2 58 81.0
CAN.G309.11 Capsicum annuum HOM05D007116 ORTHO05D008255 7.9e-22 107.8 60 78.3
Thecc.09G259900 Theobroma cacao HOM05D007116 ORTHO05D008255 7.9e-22 107.8 58 81.0
vmacro14456 Vaccinium macrocarpon HOM05D007116 ORTHO05D008255 7.9e-22 107.8 58 81.0
FAN25G2160 Fragaria x ananassa HOM05D007116 ORTHO05D008255 1.0e-21 107.5 62 75.8
Ah.01g002760 Amaranthus hybridus HOM05D007116 ORTHO05D008255 1.3e-21 107.1 58 77.6
MD03G1105000 Malus domestica HOM05D007116 ORTHO05D008255 1.3e-21 107.1 58 77.6
Manes.11G141700 Manihot esculenta HOM05D007116 ORTHO05D008255 1.3e-21 107.1 58 79.3
Prupe.6G095100 Prunus persica HOM05D007116 ORTHO05D008255 1.3e-21 107.1 58 77.6
Solyc11g069690.3 Solanum lycopersicum HOM05D007116 ORTHO05D008255 1.3e-21 107.1 58 79.3
Sopen11g028590 Solanum pennellii HOM05D007116 ORTHO05D008255 1.3e-21 107.1 58 79.3
PGSC0003DMG400019678 Solanum tuberosum HOM05D007116 ORTHO05D008255 1.3e-21 107.1 58 79.3
AUR62006524 Chenopodium quinoa HOM05D007116 ORTHO05D008255 1.8e-21 106.7 58 79.3
Haze_23906 Corylus avellana HOM05D007116 ORTHO05D008255 1.8e-21 106.7 58 79.3
MELO3C025752.2 Cucumis melo HOM05D007116 ORTHO05D008255 1.8e-21 106.7 58 79.3
Dinv32784 Davidia involucrata HOM05D007116 ORTHO05D008255 1.8e-21 106.7 58 77.6
FAN16G2809 Fragaria x ananassa HOM05D007116 ORTHO05D008255 1.8e-21 106.7 78 64.1
Nn2g10686 Nelumbo nucifera HOM05D007116 ORTHO05D008255 1.8e-21 106.7 58 77.6
CDE09G0756 Ceratophyllum demersum HOM05D007116 ORTHO05D008255 2.3e-21 106.3 60 75.0
ClCG02G020980 Citrullus lanatus HOM05D007116 ORTHO05D008255 2.3e-21 106.3 57 80.7
EL10Ac9g22473 Beta vulgaris HOM05D007116 ORTHO05D008255 3.0e-21 105.9 58 77.6
CSS0011684 Camellia sinensis var. sinensis HOM05D007116 ORTHO05D008255 3.0e-21 105.9 58 77.6
CSS0026412 Camellia sinensis var. sinensis HOM05D007116 ORTHO05D008255 3.9e-21 105.5 58 77.6
CSS0034839 Camellia sinensis var. sinensis HOM05D007116 ORTHO05D008255 3.9e-21 105.5 58 77.6
Cpa.g.sc139.73 Carica papaya HOM05D007116 ORTHO05D008255 3.9e-21 105.5 58 77.6
Migut.D02186 Erythranthe guttata HOM05D007116 ORTHO05D008255 3.9e-21 105.5 60 75.0
FAN11G3109 Fragaria x ananassa HOM05D007116 ORTHO05D008255 3.9e-21 105.5 62 74.2
Hma1.2p1_0071F.1_g038060 Hydrangea macrophylla HOM05D007116 ORTHO05D008255 3.9e-21 105.5 58 77.6
Potri.009G004500 Populus trichocarpa HOM05D007116 ORTHO05D008255 3.9e-21 105.5 58 81.0
RcHm_v2.0_Chr5g0060481 Rosa chinensis HOM05D007116 ORTHO05D008255 3.9e-21 105.5 58 77.6
Sabra09G0002000 Salix brachista HOM05D007116 ORTHO05D008255 3.9e-21 105.5 58 81.0
unitig_46.g18230 Utricularia gibba HOM05D007116 ORTHO05D008255 5.1e-21 105.1 58 75.9
Aa31sc281G20 Aethionema arabicum HOM05D007116 ORTHO05D008255 6.7e-21 104.8 58 77.6
Ca_01432_v3 Cicer arietinum L. HOM05D001788 ORTHO05D003523 6.7e-21 104.8 58 75.9
Cc01_g11490 Coffea canephora HOM05D007116 ORTHO05D008255 6.7e-21 104.8 58 79.3
Duzib168G0016 Durio zibethinus HOM05D007116 ORTHO05D008255 6.7e-21 104.8 58 79.3
FvH4_3g33160 Fragaria vesca HOM05D007116 ORTHO05D008255 6.7e-21 104.8 58 77.6
SGA_v2.0_scaffold61G21169 Striga asiatica HOM05D007116 ORTHO05D008255 6.7e-21 104.8 58 77.6
Aqoxy2G01812 Aquilegia oxysepala HOM05D007116 ORTHO05D008255 8.7e-21 104.4 58 75.9
CiPaw.14G078100 Carya illinoinensis HOM05D007116 ORTHO05D008255 1.5e-20 103.6 58 77.6
CDE02G2612 Ceratophyllum demersum HOM05D007116 ORTHO05D008255 1.5e-20 103.6 60 73.3
FAN21G4030 Fragaria x ananassa HOM05D001788 ORTHO05D003523 1.5e-20 103.6 58 77.6
Hma1.2p1_0071F.1_g038070 Hydrangea macrophylla HOM05D007116 ORTHO05D008255 1.5e-20 103.6 57 77.2
Lj3g0013477 Lotus japonicus HOM05D007116 ORTHO05D008255 1.5e-20 103.6 60 71.7
Medtr2g093680 Medicago truncatula HOM05D007116 ORTHO05D008255 1.5e-20 103.6 58 75.9
Actinidia03745 Actinidia chinensis HOM05D007116 ORTHO05D008255 1.9e-20 103.2 58 75.9
CANSAT54G1028 Cannabis sativa HOM05D007116 ORTHO05D008255 1.9e-20 103.2 58 77.6
Thhalv10009030m.g Eutrema salsugineum HOM05D007116 ORTHO05D008255 2.5e-20 102.8 58 75.9
PSO339G1106 Papaver somniferum HOM05D007116 ORTHO05D008255 2.5e-20 102.8 60 73.3
PSO384G0060 Papaver somniferum HOM05D007116 ORTHO05D008255 2.5e-20 102.8 60 73.3
Lalb_Chr14g0374781 Lupinus albus HOM05D007116 ORTHO05D008255 3.3e-20 102.4 58 74.1
Psat5g277520 Pisum sativum HOM05D007116 ORTHO05D008255 3.3e-20 102.4 60 71.7
Eucgr.J00949 Eucalyptus grandis HOM05D007116 ORTHO05D008255 4.3e-20 102.1 58 74.1
CARHR007740 Cardamine hirsuta HOM05D007116 ORTHO05D008255 5.7e-20 101.7 58 74.1
Ciclev10029486m.g Citrus clementina HOM05D007116 ORTHO05D008255 7.4e-20 101.3 58 75.9
Glyma.13G328300 Glycine max HOM05D007116 ORTHO05D008255 7.4e-20 101.3 60 73.3
Glyma.15G045500 Glycine max HOM05D007116 ORTHO05D008255 7.4e-20 101.3 60 73.3
Os03g0287900 Oryza sativa ssp. japonica HOM05D007116 ORTHO05D008255 7.4e-20 101.3 58 74.1
Sc06g0010500 Simmondsia chinensis HOM05D007116 ORTHO05D008255 7.4e-20 101.3 58 75.9
HPP92_003246 Vanilla planifolia HOM05D007116 ORTHO05D008255 7.4e-20 101.3 58 74.1
VMungo1080G0278 Vigna mungo HOM05D007116 ORTHO05D008255 7.4e-20 101.3 97 51.5
Phvul.005G137100 Phaseolus vulgaris HOM05D007116 ORTHO05D008255 9.7e-20 100.9 97 51.5
Sed0028029 Sechium edule HOM05D007116 ORTHO05D008255 9.7e-20 100.9 57 77.2
GSVIVG01025140001 Vitis vinifera HOM05D007116 ORTHO05D008255 1.3e-19 100.5 58 74.1
BcaC05g24710 Brassica carinata HOM05D007116 ORTHO05D008255 1.6e-19 100.1 58 72.4
A06p05040 Brassica napus HOM05D007116 ORTHO05D008255 1.6e-19 100.1 58 72.4
C05p05980 Brassica napus HOM05D007116 ORTHO05D008255 1.6e-19 100.1 58 72.4
BraA06t23710Z Brassica rapa HOM05D007116 ORTHO05D008255 1.6e-19 100.1 58 72.4
Carub.0001s0731 Capsella rubella HOM05D007116 ORTHO05D008255 1.6e-19 100.1 58 72.4
arahy.Tifrunner.gnm1.ann1.BKN2Z7 Arachis hypogaea HOM05D007116 ORTHO05D008255 2.2e-19 99.8 58 70.7
arahy.Tifrunner.gnm1.ann1.W744GL Arachis hypogaea HOM05D007116 ORTHO05D008255 2.2e-19 99.8 58 70.7
BcaB02g06700 Brassica carinata HOM05D007116 ORTHO05D008255 2.2e-19 99.8 58 72.4
BcaC05g24713 Brassica carinata HOM05D007116 ORTHO05D008255 2.2e-19 99.8 58 72.4
MBI05_g31455_MAGBIO Magnolia biondii HOM05D007116 ORTHO05D008255 2.2e-19 99.8 60 70.0
Zm00001eb013190 Zea mays HOM05D007116 ORTHO05D008255 2.2e-19 99.8 58 72.4
TWI31G0539 Tripterygium wilfordii HOM05D007116 ORTHO05D008255 3.7e-19 99.0 58 75.9
BolC5t29359H Brassica oleracea HOM05D007116 ORTHO05D008255 4.8e-19 98.6 58 70.7
AL1G18290 Arabidopsis lyrata HOM05D007116 ORTHO05D008255 6.3e-19 98.2 58 70.7
AT1G07960 Arabidopsis thaliana HOM05D007116 ORTHO05D008255 6.3e-19 98.2 58 72.4
DCAR_006049 Daucus carota HOM05D007116 ORTHO05D008255 8.2e-19 97.8 58 70.7
HanXRQChr07g0197431 Helianthus annuus HOM05D007116 ORTHO05D008255 1.1e-18 97.4 60 70.0
Lalb_Chr24g0394461 Lupinus albus HOM05D007116 ORTHO05D008255 1.4e-18 97.1 60 68.3
QL01p037299 Quercus lobata HOM05D007116 ORTHO05D008255 1.4e-18 97.1 58 70.7
TWI79G1024 Tripterygium wilfordii HOM05D007116 ORTHO05D008255 2.4e-18 96.3 58 72.4
Atru.chr3.3688 Acer truncatum HOM05D007116 ORTHO05D008255 3.1e-18 95.9 58 72.4
ECA238G1748 Erigeron canadensis HOM05D000001 ORTHO05D000003 3.1e-18 95.9 58 69.0
Lsat_1_v5_gn_2_97820 Lactuca sativa HOM05D007116 ORTHO05D008255 5.3e-18 95.1 58 70.7
SEGI_21083 Sequoiadendron giganteum HOM05D007116 ORTHO05D008255 2.6e-17 92.8 57 64.9
ATR1159G039 Amborella trichopoda HOM05D007116 ORTHO05D008255 1.0e-16 90.9 57 66.7
Ah.01g015030 Amaranthus hybridus HOM05D007116 ORTHO05D008255 2.5e-15 86.3 108 42.6
Mapoly0090s0032 Marchantia polymorpha HOM05D007116 ORTHO05D008255 3.9e-13 79.0 57 59.6
AagrBONN_evm.TU.Sc2ySwM_344.3330 Anthoceros agrestis HOM05D007116 ORTHO05D008255 6.7e-13 78.2 77 45.5
Pp3c6_3120 Physcomitrium patens HOM05D007116 ORTHO05D008255 2.0e-12 76.6 58 56.9
SMO145G0025 Selaginella moellendorffii HOM05D007116 ORTHO05D008255 8.2e-11 71.2 57 49.1
CBR_g16056 Chara braunii HOM05D007116 ORTHO05D008255 1.4e-07 60.5 57 42.1
CBR_g16054 Chara braunii HOM05D002981 ORTHO05D008255 4.2e-07 58.9 57 40.4
CBR_g3892 Chara braunii HOM05D000172 ORTHO05D008255 1.6e-06 57.0 103 29.1
Actinidia07116 Actinidia chinensis HOM05D001788 ORTHO05D003523 7.9e-06 54.7 33 69.7


User provided reference genes

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