Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI05905 Sapria himalayana HOM05D005278 ORTHO05D006500 1.2e-158 563.1 297 100.0
Potri.001G245500 Populus trichocarpa HOM05D005278 ORTHO05D006500 2.0e-36 157.1 214 50.0
Thecc.09G313600 Theobroma cacao HOM05D005278 ORTHO05D006500 2.0e-36 157.1 216 49.5
Manes.02G127600 Manihot esculenta HOM05D005278 ORTHO05D006500 7.7e-36 155.2 215 47.9
Ciclev10028430m.g Citrus clementina HOM05D005278 ORTHO05D006500 1.0e-35 154.8 186 53.2
Manes.01G168300 Manihot esculenta HOM05D005278 ORTHO05D006500 1.1e-34 151.4 208 47.1
Gorai.003G128600 Gossypium raimondii HOM05D005278 ORTHO05D006500 1.2e-33 147.9 196 50.5
THA.LOC104814887 Tarenaya hassleriana HOM05D005278 ORTHO05D006500 1.2e-33 147.9 196 50.0
Sabra16G0148900 Salix brachista HOM05D005278 ORTHO05D006500 2.1e-33 147.1 239 46.0
GSVIVG01024871001 Vitis vinifera HOM05D005278 ORTHO05D006500 2.7e-33 146.7 209 47.4
Nn2g13505 Nelumbo nucifera HOM05D005278 ORTHO05D006500 8.0e-33 145.2 201 49.3
TAR369G1109 Trochodendron aralioides HOM05D005278 ORTHO05D006500 8.0e-33 145.2 201 48.3
Actinidia08546 Actinidia chinensis HOM05D005278 ORTHO05D006500 1.0e-32 144.8 197 48.2
Dinv17056 Davidia involucrata HOM05D005278 ORTHO05D006500 1.0e-32 144.8 210 46.7
Dinv43000 Davidia involucrata HOM05D005278 ORTHO05D006500 1.0e-32 144.8 210 46.7
Dinv43097 Davidia involucrata HOM05D005278 ORTHO05D006500 1.0e-32 144.8 210 46.7
QL01p028069 Quercus lobata HOM05D005278 ORTHO05D006500 1.0e-32 144.8 173 53.2
Gohir.A03G045500 Gossypium hirsutum HOM05D005278 ORTHO05D006500 2.3e-32 143.7 196 49.5
Gohir.D03G121500 Gossypium hirsutum HOM05D005278 ORTHO05D006500 2.3e-32 143.7 196 50.0
Aa31LG4G15720 Aethionema arabicum HOM05D005278 ORTHO05D006500 4.0e-32 142.9 194 49.5
Cpa.g.sc81.65 Carica papaya HOM05D005278 ORTHO05D006500 5.2e-32 142.5 209 47.8
Hund18883 Selenicereus undatus HOM05D005278 ORTHO05D006500 5.2e-32 142.5 149 57.0
CARHR285340 Cardamine hirsuta HOM05D005278 ORTHO05D006500 6.8e-32 142.1 216 45.8
arahy.Tifrunner.gnm1.ann1.NY9X43 Arachis hypogaea HOM05D005278 ORTHO05D006500 1.5e-31 141.0 208 46.2
Hma1.2p1_0274F.1_g110490 Hydrangea macrophylla HOM05D005278 ORTHO05D006500 1.5e-31 141.0 189 47.6
Hma1.2p1_0274F.1_g110500 Hydrangea macrophylla HOM05D005278 ORTHO05D006500 1.5e-31 141.0 150 55.3
arahy.Tifrunner.gnm1.ann1.4JU9WJ Arachis hypogaea HOM05D005278 ORTHO05D006500 3.4e-31 139.8 208 45.7
Cfa011575 Carpinus fangiana HOM05D005278 ORTHO05D006500 3.4e-31 139.8 201 47.8
vmacro03023 Vaccinium macrocarpon HOM05D005278 ORTHO05D006500 4.4e-31 139.4 208 46.2
Aqoxy1G00819 Aquilegia oxysepala HOM05D005278 ORTHO05D006500 7.5e-31 138.7 197 45.7
CANSAT54G0396 Cannabis sativa HOM05D005278 ORTHO05D006500 7.5e-31 138.7 153 55.6
Lj3g0005158 Lotus japonicus HOM05D005278 ORTHO05D006500 7.5e-31 138.7 215 45.1
CSS0023124 Camellia sinensis var. sinensis HOM05D005278 ORTHO05D006500 9.8e-31 138.3 217 45.2
Lalb_Chr14g0372041 Lupinus albus HOM05D005278 ORTHO05D006500 2.2e-30 137.1 212 45.3
Cc01_g13430 Coffea canephora HOM05D005278 ORTHO05D006500 2.8e-30 136.7 198 47.5
Haze_24189 Corylus avellana HOM05D005278 ORTHO05D006500 2.8e-30 136.7 201 46.8
MSTRG.12654 Avicennia marina HOM05D005278 ORTHO05D006500 3.7e-30 136.3 203 45.8
Carub.0008s1974 Capsella rubella HOM05D005278 ORTHO05D006500 3.7e-30 136.3 216 45.4
Glyma.15G035200 Glycine max HOM05D005278 ORTHO05D006500 3.7e-30 136.3 203 47.8
Lalb_Chr24g0397151 Lupinus albus HOM05D005278 ORTHO05D006500 3.7e-30 136.3 213 44.1
EL10Ac7g16079 Beta vulgaris HOM05D005278 ORTHO05D006500 6.3e-30 135.6 157 55.4
CiPaw.14G064400 Carya illinoinensis HOM05D005278 ORTHO05D006500 6.3e-30 135.6 209 45.0
Medtr2g097780 Medicago truncatula HOM05D005278 ORTHO05D006500 1.1e-29 134.8 149 53.7
AUR62020048 Chenopodium quinoa HOM05D005278 ORTHO05D006500 1.8e-29 134.0 197 47.2
Ah.08g220210 Amaranthus hybridus HOM05D005278 ORTHO05D006500 2.4e-29 133.7 149 55.0
CAN.G173.8 Capsicum annuum HOM05D005278 ORTHO05D006500 2.4e-29 133.7 213 42.7
Nitab4.5_0006512g0020 Nicotiana tabacum HOM05D005278 ORTHO05D006500 2.4e-29 133.7 204 43.6
Phvul.L008343 Phaseolus vulgaris HOM05D005278 ORTHO05D006500 2.4e-29 133.7 175 49.1
TPR.G6835 Trifolium pratense HOM05D005278 ORTHO05D006500 3.1e-29 133.3 196 47.4
TWI79G1569 Tripterygium wilfordii HOM05D005278 ORTHO05D006500 3.1e-29 133.3 199 46.7
Ca_01301_v3 Cicer arietinum L. HOM05D005278 ORTHO05D006500 4.1e-29 132.9 195 45.6
PSO384G3155 Papaver somniferum HOM05D005278 ORTHO05D006500 4.1e-29 132.9 206 44.7
VMungo1080G1008 Vigna mungo HOM05D005278 ORTHO05D006500 7.0e-29 132.1 210 46.2
Glyma.13G339200 Glycine max HOM05D005278 ORTHO05D006500 9.1e-29 131.7 210 45.2
Eucgr.B02303 Eucalyptus grandis HOM05D005278 ORTHO05D006500 1.6e-28 131.0 158 53.2
Nitab4.5_0000507g0040 Nicotiana tabacum HOM05D005278 ORTHO05D006500 1.6e-28 131.0 213 43.7
Lj1A145T60 Lonicera japonica HOM05D005278 ORTHO05D006500 2.0e-28 130.6 206 43.7
DCAR_007424 Daucus carota HOM05D005278 ORTHO05D006500 2.7e-28 130.2 158 52.5
PSO339G3476 Papaver somniferum HOM05D005278 ORTHO05D006500 3.5e-28 129.8 206 43.7
Sed0022829 Sechium edule HOM05D005278 ORTHO05D006500 3.5e-28 129.8 216 41.2
HanXRQChr01g0010681 Helianthus annuus HOM05D005278 ORTHO05D006500 4.5e-28 129.4 195 44.1
MBI05_g02648_MAGBIO Magnolia biondii HOM05D005278 ORTHO05D006500 7.7e-28 128.6 156 50.6
Sopen09g019050 Solanum pennellii HOM05D005278 ORTHO05D006500 7.7e-28 128.6 200 44.5
AUR62001727 Chenopodium quinoa HOM05D005278 ORTHO05D006500 1.3e-27 127.9 205 46.8
Oeu004184.2 Olea europaea HOM05D005278 ORTHO05D006500 2.3e-27 127.1 195 44.6
PGR102G1735 Punica granatum HOM05D005278 ORTHO05D006500 2.3e-27 127.1 153 50.3
Lsat_1_v5_gn_5_169740 Lactuca sativa HOM05D005278 ORTHO05D006500 5.0e-27 125.9 153 50.3
Peaxi162Scf00676g00221 Petunia axillaris HOM05D005278 ORTHO05D006500 5.0e-27 125.9 238 41.6
Psat5g287560 Pisum sativum HOM05D005278 ORTHO05D006500 8.6e-27 125.2 212 41.5
BolC9t57995H Brassica oleracea HOM05D005278 ORTHO05D006500 1.5e-26 124.4 169 48.5
COL.COLO4_18589 Corchorus olitorius HOM05D005278 ORTHO05D006500 2.5e-26 123.6 192 47.4
FAN21G0275 Fragaria x ananassa HOM05D005278 ORTHO05D006500 3.3e-26 123.2 194 44.3
Migut.N00899 Erythranthe guttata HOM05D005278 ORTHO05D006500 7.2e-26 122.1 158 48.7
FAN16G0192 Fragaria x ananassa HOM05D005278 ORTHO05D006500 7.2e-26 122.1 203 43.8
MD11G1092400 Malus domestica HOM05D005278 ORTHO05D006500 7.2e-26 122.1 195 44.6
ECA248G1020 Erigeron canadensis HOM05D005278 ORTHO05D006500 9.5e-26 121.7 153 49.0
FAN17G1485 Fragaria x ananassa HOM05D005278 ORTHO05D006500 9.5e-26 121.7 194 43.8
FAN28G2746 Fragaria x ananassa HOM05D005278 ORTHO05D006500 9.5e-26 121.7 194 43.8
Atru.chr3.4014 Acer truncatum HOM05D005278 ORTHO05D006500 1.2e-25 121.3 145 51.7
ClCG02G019860 Citrullus lanatus HOM05D005278 ORTHO05D006500 1.2e-25 121.3 165 47.3
Prupe.6G068200 Prunus persica HOM05D005278 ORTHO05D006500 1.2e-25 121.3 157 47.8
unitig_52.g16817 Utricularia gibba HOM05D005278 ORTHO05D006500 1.2e-25 121.3 164 47.0
FAN11G2960 Fragaria x ananassa HOM05D005278 ORTHO05D006500 1.6e-25 120.9 194 43.8
FvH4_3g37100 Fragaria vesca HOM05D005278 ORTHO05D006500 3.6e-25 119.8 194 43.3
Aa31LG1G11980 Aethionema arabicum HOM05D005278 ORTHO05D006500 4.7e-25 119.4 193 45.6
RcHm_v2.0_Chr5g0066731 Rosa chinensis HOM05D005278 ORTHO05D006500 1.0e-24 118.2 194 42.8
Sabra09G0026700 Salix brachista HOM05D005278 ORTHO05D006500 1.8e-24 117.5 215 42.3
CsaV3_6G016570 Cucumis sativus L. HOM05D005278 ORTHO05D006500 1.2e-23 114.8 158 46.8
CsaV3_7G010040 Cucumis sativus L. HOM05D005278 ORTHO05D006500 1.2e-23 114.8 158 46.8
MELO3C025886.2 Cucumis melo HOM05D005278 ORTHO05D006500 1.5e-23 114.4 165 44.8
Lsat_1_v5_gn_9_24160 Lactuca sativa HOM05D005278 ORTHO05D006500 4.4e-23 112.8 196 42.3
AL48U10090 Arabidopsis lyrata HOM05D005278 ORTHO05D006500 5.7e-23 112.5 163 47.2
BcaB08g36287 Brassica carinata HOM05D005278 ORTHO05D006500 3.7e-22 109.8 213 40.8
A10p16320 Brassica napus HOM05D005278 ORTHO05D006500 3.7e-22 109.8 213 40.8
BraA10t43715Z Brassica rapa HOM05D005278 ORTHO05D006500 3.7e-22 109.8 213 40.8
C09p51370 Brassica napus HOM05D005278 ORTHO05D006500 6.3e-22 109.0 213 40.8
Rhsim13G0076600 Rhododendron simsii HOM05D005278 ORTHO05D006500 1.4e-21 107.8 169 45.6
BcaC04g19820 Brassica carinata HOM05D005278 ORTHO05D006500 4.1e-21 106.3 213 40.4
SEGI_23562 Sequoiadendron giganteum HOM05D005278 ORTHO05D006500 9.2e-21 105.1 216 38.4
Os03g0268100 Oryza sativa ssp. japonica HOM05D005278 ORTHO05D006500 1.2e-20 104.8 196 37.2
AL8G35480 Arabidopsis lyrata HOM05D005278 ORTHO05D006500 2.3e-19 100.5 158 43.0
AT5G59210 Arabidopsis thaliana HOM05D005278 ORTHO05D006500 5.0e-19 99.4 126 49.2
Sp6g20780 Schrenkiella parvula HOM05D005278 ORTHO05D006500 2.1e-17 94.0 126 48.4
Zm00001eb011990 Zea mays HOM05D005278 ORTHO05D006500 2.8e-17 93.6 191 37.7
ATR0559G139 Amborella trichopoda HOM05D005278 ORTHO05D006500 3.6e-17 93.2 146 41.8
CDE04G2524 Ceratophyllum demersum HOM05D005278 ORTHO05D006500 1.8e-16 90.9 123 48.0
Thhalv10013620m.g Eutrema salsugineum HOM05D005278 ORTHO05D006500 2.3e-16 90.5 126 47.6
HPP92_018172 Vanilla planifolia HOM05D001260 ORTHO05D002424 4.0e-16 89.7 139 46.8
Zm00001eb397870 Zea mays HOM05D005278 ORTHO05D006500 8.9e-16 88.6 189 37.0
CDE07G0843 Ceratophyllum demersum HOM05D005278 ORTHO05D006500 2.6e-15 87.0 104 51.0
MD03G1084900 Malus domestica HOM05D005278 ORTHO05D006500 1.7e-14 84.3 198 35.9
FAN27G2862 Fragaria x ananassa HOM05D005278 ORTHO05D006500 2.9e-14 83.6 149 40.9
FvH4_2g37740 Fragaria vesca HOM05D005278 ORTHO05D006500 4.1e-13 79.7 94 52.1
HPP92_018158 Vanilla planifolia HOM05D005278 ORTHO05D006500 5.4e-13 79.3 158 40.5
Pp3c1_10500 Physcomitrium patens HOM05D005278 ORTHO05D006500 2.0e-12 77.4 108 45.4
BcaC03g14039 Brassica carinata HOM05D005278 ORTHO05D006500 1.3e-11 74.7 99 45.5
BolC2t07376H Brassica oleracea HOM05D005278 ORTHO05D006500 3.9e-11 73.2 99 46.5
Sc12g0001210 Simmondsia chinensis HOM05D005278 ORTHO05D006500 3.3e-10 70.1 131 39.7
C02p12810 Brassica napus HOM05D005278 ORTHO05D006500 1.6e-09 67.8 152 36.2
C02p36410 Brassica napus HOM05D005278 ORTHO05D006500 1.6e-09 67.8 103 46.6
SMO361G0431 Selaginella moellendorffii HOM05D005278 ORTHO05D006500 1.4e-08 64.7 151 35.1
RcHm_v2.0_Chr5g0066581 Rosa chinensis HOM05D005278 ORTHO05D006500 4.0e-08 63.2 65 53.8
Mapoly0044s0102 Marchantia polymorpha HOM05D005278 ORTHO05D006500 5.8e-07 59.3 119 36.1


User provided reference genes

Program Settings