Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI05383 Sapria himalayana HOM05D006261 ORTHO05D007979 5.6e-43 177.2 88 100.0
SalBow6G7179 Salvia bowleyana HOM05D006261 ORTHO05D007979 1.9e-22 109.0 100 59.0
Phvul.003G012500 Phaseolus vulgaris HOM05D006261 ORTHO05D007979 1.6e-21 105.9 102 52.0
Gohir.A01G006000 Gossypium hirsutum HOM05D006261 ORTHO05D007979 2.7e-21 105.1 100 54.0
Gorai.002G007100 Gossypium raimondii HOM05D006261 ORTHO05D007979 2.7e-21 105.1 100 53.0
EL10Ac9g21824 Beta vulgaris HOM05D006261 ORTHO05D007979 4.6e-21 104.4 100 54.0
Eucgr.I01173 Eucalyptus grandis HOM05D006261 ORTHO05D007979 4.6e-21 104.4 100 55.0
Psat6g096640 Pisum sativum HOM05D006261 ORTHO05D007979 4.6e-21 104.4 100 55.0
Hund06186 Selenicereus undatus HOM05D006261 ORTHO05D007979 6.1e-21 104.0 100 55.0
Glyma.07G178400 Glycine max HOM05D006261 ORTHO05D007979 1.0e-20 103.2 100 54.0
QL11p038259 Quercus lobata HOM05D006261 ORTHO05D007979 1.0e-20 103.2 100 55.0
Medtr1g034000 Medicago truncatula HOM05D006261 ORTHO05D007979 1.3e-20 102.8 100 54.0
VMungo1215G1075 Vigna mungo HOM05D006261 ORTHO05D007979 1.3e-20 102.8 100 52.0
Lj2g0017302 Lotus japonicus HOM05D006261 ORTHO05D007979 1.8e-20 102.4 100 55.0
Ah.01g020100 Amaranthus hybridus HOM05D006261 ORTHO05D007979 2.3e-20 102.1 100 52.0
Ca_12470_v3 Cicer arietinum L. HOM05D006261 ORTHO05D007979 3.0e-20 101.7 100 54.0
Thecc.02G096300 Theobroma cacao HOM05D006261 ORTHO05D007979 3.0e-20 101.7 100 52.0
PSO541G6069 Papaver somniferum HOM05D006261 ORTHO05D007979 3.9e-20 101.3 100 53.0
Atru.chr5.2784_Atru.chr5.2785 Acer truncatum HOM05D006261 ORTHO05D007979 5.1e-20 100.9 100 52.0
Atru.chr5.2799_Atru.chr5.2800 Acer truncatum HOM05D006261 ORTHO05D007979 5.1e-20 100.9 100 52.0
Cpa.g.sc62.43 Carica papaya HOM05D006261 ORTHO05D007979 5.1e-20 100.9 100 53.0
COL.COLO4_11716 Corchorus olitorius HOM05D006261 ORTHO05D007979 5.1e-20 100.9 100 53.0
Ciclev10028211m.g Citrus clementina HOM05D006261 ORTHO05D007979 6.7e-20 100.5 100 55.0
Haze_01887 Corylus avellana HOM05D006261 ORTHO05D007979 6.7e-20 100.5 100 54.0
SGA_v2.0_scaffold58G20611 Striga asiatica HOM05D006261 ORTHO05D007979 6.7e-20 100.5 100 55.0
PGR142G4090 Punica granatum HOM05D006261 ORTHO05D007979 8.7e-20 100.1 100 52.0
THA.LOC104807349 Tarenaya hassleriana HOM05D006261 ORTHO05D007979 8.7e-20 100.1 100 53.0
TPR.G11138 Trifolium pratense HOM05D006261 ORTHO05D007979 8.7e-20 100.1 100 52.0
Manes.15G143000 Manihot esculenta HOM05D006261 ORTHO05D007979 1.5e-19 99.4 100 52.0
Actinidia17850 Actinidia chinensis HOM05D006261 ORTHO05D007979 1.9e-19 99.0 100 51.0
CSS0020679 Camellia sinensis var. sinensis HOM05D006261 ORTHO05D007979 1.9e-19 99.0 100 53.0
arahy.Tifrunner.gnm1.ann1.WU5QTE Arachis hypogaea HOM05D006261 ORTHO05D007979 2.5e-19 98.6 106 49.1
CSS0049642 Camellia sinensis var. sinensis HOM05D006261 ORTHO05D007979 2.5e-19 98.6 100 52.0
Lalb_Chr10g0095461 Lupinus albus HOM05D006261 ORTHO05D007979 2.5e-19 98.6 100 52.0
Potri.004G144100 Populus trichocarpa HOM05D006261 ORTHO05D007979 2.5e-19 98.6 100 53.0
TWI31G0850 Tripterygium wilfordii HOM05D006261 ORTHO05D007979 2.5e-19 98.6 100 50.0
Cfa005432 Carpinus fangiana HOM05D006261 ORTHO05D007979 3.3e-19 98.2 100 53.0
ECA236G1018 Erigeron canadensis HOM05D006261 ORTHO05D001911 3.3e-19 98.2 100 52.0
Prupe.8G116700 Prunus persica HOM05D006261 ORTHO05D007979 3.3e-19 98.2 100 53.0
unitig_21.g20756 Utricularia gibba HOM05D006261 ORTHO05D007979 3.3e-19 98.2 100 52.0
CANSAT25G2015 Cannabis sativa HOM05D006261 ORTHO05D007979 4.3e-19 97.8 100 52.0
CiPaw.05G054700 Carya illinoinensis HOM05D006261 ORTHO05D007979 4.3e-19 97.8 100 52.0
arahy.Tifrunner.gnm1.ann1.97F800 Arachis hypogaea HOM05D006261 ORTHO05D007979 5.7e-19 97.4 106 48.1
TAR381G0774 Trochodendron aralioides HOM05D006261 ORTHO05D007979 5.7e-19 97.4 100 50.0
AUR62011430 Chenopodium quinoa HOM05D006261 ORTHO05D007979 9.7e-19 96.7 100 51.0
MELO3C018434.2 Cucumis melo HOM05D006261 ORTHO05D007979 9.7e-19 96.7 99 51.5
AUR62016631 Chenopodium quinoa HOM05D006261 ORTHO05D007979 1.3e-18 96.3 101 50.5
HanXRQChr16g0508741 Helianthus annuus HOM05D006261 ORTHO05D007979 1.3e-18 96.3 100 51.0
Lsat_1_v5_gn_7_87821 Lactuca sativa HOM05D006261 ORTHO05D007979 1.3e-18 96.3 100 51.0
Peaxi162Scf00684g00565 Petunia axillaris HOM05D006261 ORTHO05D007979 1.3e-18 96.3 100 53.0
CsaV3_7G008780 Cucumis sativus L. HOM05D006261 ORTHO05D007979 1.6e-18 95.9 99 50.5
FAN27G0123 Fragaria x ananassa HOM05D006261 ORTHO05D007979 1.6e-18 95.9 100 52.0
Aa31LG2G16340 Aethionema arabicum HOM05D006261 ORTHO05D007979 2.2e-18 95.5 100 52.0
Potri.009G106100 Populus trichocarpa HOM05D006261 ORTHO05D007979 2.2e-18 95.5 100 53.0
PGSC0003DMG400022938 Solanum tuberosum HOM05D006261 ORTHO05D007979 2.8e-18 95.1 100 52.0
Cc02_g18510 Coffea canephora HOM05D006261 ORTHO05D007979 3.7e-18 94.7 103 51.5
FAN15G2665 Fragaria x ananassa HOM05D006261 ORTHO05D007979 3.7e-18 94.7 100 52.0
FAN20G2731 Fragaria x ananassa HOM05D006261 ORTHO05D007979 3.7e-18 94.7 100 52.0
Sed0027300 Sechium edule HOM05D006261 ORTHO05D007979 3.7e-18 94.7 99 50.5
vmacro19482 Vaccinium macrocarpon HOM05D006261 ORTHO05D007979 3.7e-18 94.7 118 43.2
A01p04450 Brassica napus HOM05D006261 ORTHO05D007979 6.3e-18 94.0 100 50.0
C01p04840 Brassica napus HOM05D006261 ORTHO05D007979 6.3e-18 94.0 100 50.0
BraA01t00432Z Brassica rapa HOM05D006261 ORTHO05D007979 6.3e-18 94.0 100 50.0
Lj9C360T7 Lonicera japonica HOM05D006261 ORTHO05D007979 6.3e-18 94.0 85 54.1
BolC1t00468H Brassica oleracea HOM05D006261 ORTHO05D007979 8.2e-18 93.6 100 50.0
MBI02_g21208_MAGBIO Magnolia biondii HOM05D006261 ORTHO05D007979 8.2e-18 93.6 100 49.0
Thhalv10025131m.g Eutrema salsugineum HOM05D006261 ORTHO05D007979 1.1e-17 93.2 100 49.0
MD10G1089700 Malus domestica HOM05D006261 ORTHO05D007979 1.1e-17 93.2 100 51.0
Nn5g30173 Nelumbo nucifera HOM05D006261 ORTHO05D007979 1.1e-17 93.2 100 49.0
Solyc11g044870.2 Solanum lycopersicum HOM05D006261 ORTHO05D007979 1.1e-17 93.2 100 51.0
HPP92_004238 Vanilla planifolia HOM05D006261 ORTHO05D007979 1.1e-17 93.2 100 50.0
AL7G17470 Arabidopsis lyrata HOM05D006261 ORTHO05D007979 1.4e-17 92.8 100 48.0
AT4G33945 Arabidopsis thaliana HOM05D006261 ORTHO05D007979 1.4e-17 92.8 100 48.0
Rhsim05G0080700 Rhododendron simsii HOM05D006261 ORTHO05D007979 1.8e-17 92.4 119 44.5
GSVIVG01031798001 Vitis vinifera HOM05D006261 ORTHO05D007979 1.8e-17 92.4 100 50.0
Migut.B00311 Erythranthe guttata HOM05D006261 ORTHO05D007979 2.4e-17 92.0 100 50.0
RcHm_v2.0_Chr6g0259011 Rosa chinensis HOM05D006261 ORTHO05D007979 2.4e-17 92.0 99 50.5
Sabra04G0095700 Salix brachista HOM05D006261 ORTHO05D007979 2.4e-17 92.0 109 45.9
ATR0097G005 Amborella trichopoda HOM05D006261 ORTHO05D007979 5.3e-17 90.9 102 45.1
Aqoxy6G01433 Aquilegia oxysepala HOM05D006261 ORTHO05D007979 6.9e-17 90.5 100 47.0
MBI15_g16863_MAGBIO Magnolia biondii HOM05D006261 ORTHO05D007979 9.0e-17 90.1 87 52.9
Sp7g31680 Schrenkiella parvula HOM05D006261 ORTHO05D007979 1.2e-16 89.7 100 48.0
Carub.0007s0647 Capsella rubella HOM05D006261 ORTHO05D007979 2.0e-16 89.0 100 47.0
Sopen11g020360 Solanum pennellii HOM05D006261 ORTHO05D007979 2.6e-16 88.6 99 49.5
CARHR242070 Cardamine hirsuta HOM05D006261 ORTHO05D007979 3.4e-16 88.2 100 47.0
HPP92_004260 Vanilla planifolia HOM05D006261 ORTHO05D007979 4.5e-16 87.8 100 48.0
Nitab4.5_0002141g0010 Nicotiana tabacum HOM05D006261 ORTHO05D007979 7.7e-16 87.0 85 52.9
CDE10G1007 Ceratophyllum demersum HOM05D006261 ORTHO05D007979 1.7e-15 85.9 87 51.7
BcaB03g11867 Brassica carinata HOM05D006261 ORTHO05D007979 2.2e-15 85.5 101 47.5
Os02g0761200 Oryza sativa ssp. japonica HOM05D006261 ORTHO05D007979 2.2e-15 85.5 100 48.0
Zm00001eb255680 Zea mays HOM05D006261 ORTHO05D007979 2.2e-15 85.5 100 47.0
Hma1.2p1_3161F.1_g333480 Hydrangea macrophylla HOM05D006261 ORTHO05D007979 3.8e-15 84.7 116 42.2
Nitab4.5_0000736g0010 Nicotiana tabacum HOM05D006261 ORTHO05D007979 3.8e-15 84.7 85 51.8
MBI02_g32602_MAGBIO Magnolia biondii HOM05D006261 ORTHO05D007979 1.1e-14 83.2 112 41.1
Hma1.2p1_0584F.1_g183110 Hydrangea macrophylla HOM05D006261 ORTHO05D007979 2.5e-14 82.0 115 41.7
SEGI_22642 Sequoiadendron giganteum HOM05D006261 ORTHO05D007979 2.1e-13 79.0 100 43.0
CAN.G406.3 Capsicum annuum HOM05D006261 ORTHO05D007979 6.7e-12 73.9 133 35.3
ClCG02G005750 Citrullus lanatus HOM05D006261 ORTHO05D007979 7.4e-11 70.5 99 42.4
Oeu007256.2 Olea europaea HOM05D006261 ORTHO05D007979 1.4e-09 66.2 100 39.0
Sc08g0000100 Simmondsia chinensis HOM05D006261 ORTHO05D007979 3.4e-08 61.6 56 53.6
Mapoly0088s0010 Marchantia polymorpha HOM05D006261 ORTHO05D007979 5.9e-08 60.8 100 36.0
Gohir.D01G006100 Gossypium hirsutum HOM05D006261 ORTHO05D007979 7.7e-08 60.5 102 35.3
RcHm_v2.0_Chr6g0252951 Rosa chinensis HOM05D006261 ORTHO05D007979 2.9e-07 58.5 99 39.4
DCAR_022063 Daucus carota HOM05D006261 ORTHO05D007979 4.2e-06 54.7 56 53.6
FAN24G3480 Fragaria x ananassa HOM05D006261 ORTHO05D007979 9.4e-06 53.5 56 48.2


User provided reference genes

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