Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI05287 Sapria himalayana HOM05D006149 ORTHO05D007341 9.3e-97 357.1 206 100.0
Gohir.A03G186300 Gossypium hirsutum HOM05D006149 ORTHO05D007341 2.8e-37 159.5 125 71.2
Manes.10G076500 Manihot esculenta HOM05D006149 ORTHO05D007341 6.3e-37 158.3 125 72.0
Ca_11076_v3 Cicer arietinum L. HOM05D006149 ORTHO05D007341 1.4e-36 157.1 126 70.6
Gohir.D02G207100 Gossypium hirsutum HOM05D006149 ORTHO05D007341 1.4e-36 157.1 123 71.5
Gorai.005G235000 Gossypium raimondii HOM05D006149 ORTHO05D007341 1.4e-36 157.1 123 71.5
Medtr1g107435 Medicago truncatula HOM05D006149 ORTHO05D007341 1.6e-35 153.7 123 69.9
Duzib052G0317 Durio zibethinus HOM05D006149 ORTHO05D007341 2.7e-35 152.9 122 72.1
Lj5g0003815 Lotus japonicus HOM05D006149 ORTHO05D007341 2.7e-35 152.9 125 68.8
Cpa.g.sc76.22 Carica papaya HOM05D006149 ORTHO05D007341 4.5e-35 152.1 126 68.3
COL.COLO4_32597 Corchorus olitorius HOM05D006149 ORTHO05D007341 1.0e-34 151.0 127 67.7
VMungo0720G1566 Vigna mungo HOM05D006149 ORTHO05D007341 1.0e-34 151.0 125 67.2
Cfa004575 Carpinus fangiana HOM05D006149 ORTHO05D007341 1.3e-34 150.6 122 71.3
Phvul.007G040000 Phaseolus vulgaris HOM05D006149 ORTHO05D007341 1.3e-34 150.6 126 69.0
Ciclev10029393m.g Citrus clementina HOM05D006149 ORTHO05D007341 2.3e-34 149.8 118 68.6
Hund06318 Selenicereus undatus HOM05D006149 ORTHO05D007341 2.3e-34 149.8 111 74.8
arahy.Tifrunner.gnm1.ann1.0F7AFP Arachis hypogaea HOM05D006149 ORTHO05D007341 5.0e-34 148.7 125 67.2
Sabra09G0073900 Salix brachista HOM05D006149 ORTHO05D007341 5.0e-34 148.7 114 71.1
Thecc.02G107700 Theobroma cacao HOM05D006149 ORTHO05D007341 5.0e-34 148.7 126 65.9
RcHm_v2.0_Chr6g0255351 Rosa chinensis HOM05D006149 ORTHO05D007341 1.1e-33 147.5 91 84.6
arahy.Tifrunner.gnm1.ann1.GUMB1Z Arachis hypogaea HOM05D006149 ORTHO05D007341 1.5e-33 147.1 125 66.4
THA.LOC104807242 Tarenaya hassleriana HOM05D006149 ORTHO05D007341 1.5e-33 147.1 131 62.6
Psat6g219120 Pisum sativum HOM05D006149 ORTHO05D007341 1.9e-33 146.7 118 68.6
Sc08g0001390 Simmondsia chinensis HOM05D006149 ORTHO05D007341 2.5e-33 146.4 111 71.2
TWI32G0763 Tripterygium wilfordii HOM05D006149 ORTHO05D007341 3.3e-33 146.0 128 65.6
FAN20G0990 Fragaria x ananassa HOM05D006149 ORTHO05D007341 4.2e-33 145.6 91 84.6
CDE02G2507 Ceratophyllum demersum HOM05D006149 ORTHO05D007341 5.5e-33 145.2 115 73.0
CDE02G4185 Ceratophyllum demersum HOM05D006149 ORTHO05D007341 5.5e-33 145.2 115 73.0
Glyma.20G128800 Glycine max HOM05D006149 ORTHO05D007341 5.5e-33 145.2 126 66.7
MD05G1089500 Malus domestica HOM05D006149 ORTHO05D007341 5.5e-33 145.2 131 63.4
Potri.001G300300 Populus trichocarpa HOM05D006149 ORTHO05D007341 7.2e-33 144.8 111 71.2
ECA240G2462 Erigeron canadensis HOM05D006149 ORTHO05D007341 9.5e-33 144.4 138 60.1
FvH4_2g05220 Fragaria vesca HOM05D006149 ORTHO05D007341 9.5e-33 144.4 86 87.2
FAN15G1894 Fragaria x ananassa HOM05D006149 ORTHO05D007341 9.5e-33 144.4 86 87.2
FAN24G0478 Fragaria x ananassa HOM05D000289 ORTHO05D007341 9.5e-33 144.4 86 87.2
FAN27G1351 Fragaria x ananassa HOM05D000289 ORTHO05D007341 9.5e-33 144.4 86 87.2
CANSAT25G3711 Cannabis sativa HOM05D006149 ORTHO05D007341 1.6e-32 143.7 129 65.1
MELO3C019546.2 Cucumis melo HOM05D006149 ORTHO05D007341 2.8e-32 142.9 105 72.4
Lj9A321G81 Lonicera japonica HOM05D006149 ORTHO05D007341 4.7e-32 142.1 116 69.0
CsaV3_3G018210 Cucumis sativus L. HOM05D006149 ORTHO05D007341 6.1e-32 141.7 105 72.4
Dinv15763 Davidia involucrata HOM05D006149 ORTHO05D007341 6.1e-32 141.7 133 62.4
HanXRQChr03g0070291 Helianthus annuus HOM05D006149 ORTHO05D007341 6.1e-32 141.7 117 66.7
Nn4g25119 Nelumbo nucifera HOM05D006149 ORTHO05D007341 6.1e-32 141.7 96 77.1
Lsat_1_v5_gn_9_111221 Lactuca sativa HOM05D006149 ORTHO05D007341 1.0e-31 141.0 135 60.0
Sed0001717 Sechium edule HOM05D006149 ORTHO05D007341 1.0e-31 141.0 127 65.4
Aa31LG8G13110 Aethionema arabicum HOM05D006149 ORTHO05D007341 1.4e-31 140.6 134 59.7
TWI34G0529 Tripterygium wilfordii HOM05D006149 ORTHO05D007341 1.4e-31 140.6 131 64.1
Nn1g04703 Nelumbo nucifera HOM05D006149 ORTHO05D007341 1.8e-31 140.2 96 79.2
Sp3g28510 Schrenkiella parvula HOM05D006149 ORTHO05D007341 1.8e-31 140.2 129 62.8
ATR0618G054 Amborella trichopoda HOM05D006149 ORTHO05D007341 2.3e-31 139.8 104 74.0
Lalb_Chr21g0308351 Lupinus albus HOM05D006149 ORTHO05D007341 3.0e-31 139.4 124 66.1
Thhalv10022867m.g Eutrema salsugineum HOM05D006149 ORTHO05D007341 4.0e-31 139.0 129 62.0
Dinv42191 Davidia involucrata HOM05D006149 ORTHO05D007341 6.8e-31 138.3 131 62.6
CiPaw.05G011400 Carya illinoinensis HOM05D006149 ORTHO05D007341 8.9e-31 137.9 108 67.6
vmacro19450 Vaccinium macrocarpon HOM05D006149 ORTHO05D007341 1.2e-30 137.5 135 61.5
AUR62039082 Chenopodium quinoa HOM05D006149 ORTHO05D007341 1.5e-30 137.1 96 75.0
PGR142G0815 Punica granatum HOM05D006149 ORTHO05D007341 1.5e-30 137.1 130 62.3
Glyma.10G262200 Glycine max HOM05D006149 ORTHO05D007341 2.0e-30 136.7 122 64.8
Rhsim05G0088300 Rhododendron simsii HOM05D006149 ORTHO05D007341 2.0e-30 136.7 133 61.7
AL3G46990 Arabidopsis lyrata HOM05D006149 ORTHO05D007341 2.6e-30 136.3 130 62.3
BcaB03g16271 Brassica carinata HOM05D006149 ORTHO05D007341 3.4e-30 136.0 127 62.2
unitig_22.g5723 Utricularia gibba HOM05D006149 ORTHO05D007341 3.4e-30 136.0 133 60.2
Sed0008540 Sechium edule HOM05D006149 ORTHO05D007341 4.4e-30 135.6 122 65.6
CDE04G1609 Ceratophyllum demersum HOM05D006149 ORTHO05D007341 5.7e-30 135.2 108 71.3
HPP92_004777 Vanilla planifolia HOM05D006149 ORTHO05D007341 5.7e-30 135.2 131 61.8
BcaC06g36046 Brassica carinata HOM05D006149 ORTHO05D007341 7.5e-30 134.8 128 62.5
Nitab4.5_0002815g0010 Nicotiana tabacum HOM05D006149 ORTHO05D007341 7.5e-30 134.8 127 61.4
BcaC04g22139 Brassica carinata HOM05D006149 ORTHO05D007341 9.8e-30 134.4 128 61.7
C07p08530 Brassica napus HOM05D006149 ORTHO05D007341 9.8e-30 134.4 128 61.7
BolC7t41265H Brassica oleracea HOM05D006149 ORTHO05D007341 9.8e-30 134.4 128 61.7
ClCG05G010280 Citrullus lanatus HOM05D006149 ORTHO05D007341 9.8e-30 134.4 120 64.2
Prupe.8G134800 Prunus persica HOM05D006149 ORTHO05D007341 9.8e-30 134.4 113 67.3
SalBow6G4084 Salvia bowleyana HOM05D006149 ORTHO05D007341 9.8e-30 134.4 134 58.2
Carub.0003s2910 Capsella rubella HOM05D006149 ORTHO05D007341 1.7e-29 133.7 122 63.1
Nitab4.5_0005392g0090 Nicotiana tabacum HOM05D006149 ORTHO05D007341 1.7e-29 133.7 127 60.6
Peaxi162Scf00016g02334 Petunia axillaris HOM05D006149 ORTHO05D007341 1.7e-29 133.7 126 62.7
MSTRG.16714 Avicennia marina HOM05D006149 ORTHO05D007341 2.2e-29 133.3 135 57.0
Sopen01g049800 Solanum pennellii HOM05D006149 ORTHO05D007341 3.7e-29 132.5 109 66.1
PGSC0003DMG400025768 Solanum tuberosum HOM05D006149 ORTHO05D007341 3.7e-29 132.5 109 66.1
CARHR105640 Cardamine hirsuta HOM05D006149 ORTHO05D007341 4.9e-29 132.1 124 62.9
BcaB08g34585 Brassica carinata HOM05D006149 ORTHO05D007341 6.3e-29 131.7 129 58.9
Os09g0104300 Oryza sativa ssp. japonica HOM05D006149 ORTHO05D007341 8.3e-29 131.3 84 81.0
Solyc01g107610.4 Solanum lycopersicum HOM05D006149 ORTHO05D007341 8.3e-29 131.3 109 66.1
SGA_v2.0_scaffold225G43080 Striga asiatica HOM05D006149 ORTHO05D007341 8.3e-29 131.3 93 73.1
CSS0036049 Camellia sinensis var. sinensis HOM05D006149 ORTHO05D007341 1.1e-28 131.0 127 60.6
CAN.G1231.7 Capsicum annuum HOM05D006149 ORTHO05D007341 1.1e-28 131.0 127 59.1
Migut.B00388 Erythranthe guttata HOM05D006149 ORTHO05D007341 1.4e-28 130.6 96 72.9
TAR628G0594 Trochodendron aralioides HOM05D006149 ORTHO05D007341 1.4e-28 130.6 109 66.1
THA.LOC104819555 Tarenaya hassleriana HOM05D006149 ORTHO05D007341 1.8e-28 130.2 81 82.7
AT2G15270 Arabidopsis thaliana HOM05D006149 ORTHO05D007341 2.4e-28 129.8 122 61.5
MD05G1088900 Malus domestica HOM05D006149 ORTHO05D007341 2.4e-28 129.8 182 47.3
Actinidia27971 Actinidia chinensis HOM05D006149 ORTHO05D007341 4.1e-28 129.0 128 59.4
A07p05350 Brassica napus HOM05D006149 ORTHO05D007341 5.4e-28 128.6 90 75.6
BraA07t28328Z Brassica rapa HOM05D006149 ORTHO05D007341 5.4e-28 128.6 90 75.6
QL11p033743 Quercus lobata HOM05D006149 ORTHO05D007341 9.2e-28 127.9 141 53.9
PSO675G5876 Papaver somniferum HOM05D006149 ORTHO05D007341 2.7e-27 126.3 104 66.3
Eucgr.E02957 Eucalyptus grandis HOM05D006149 ORTHO05D007341 4.5e-27 125.6 82 76.8
Pp3c2_21780 Physcomitrium patens HOM05D006149 ORTHO05D007341 5.9e-27 125.2 81 81.5
Sabra16G0188500 Salix brachista HOM05D006149 ORTHO05D007341 5.9e-27 125.2 153 51.0
Oeu017469.1 Olea europaea HOM05D006149 ORTHO05D007341 1.3e-26 124.0 115 60.9
Zm00001eb020500 Zea mays HOM05D006149 ORTHO05D007341 1.3e-26 124.0 77 81.8
Zm00001eb393310 Zea mays HOM05D006149 ORTHO05D007341 1.3e-26 124.0 77 81.8
Aqoxy3G02908 Aquilegia oxysepala HOM05D006149 ORTHO05D007341 2.3e-26 123.2 88 75.0
PSO541G1364 Papaver somniferum HOM05D006149 ORTHO05D007341 2.3e-26 123.2 102 67.6
AagrBONN_evm.TU.Sc2ySwM_228.2976 Anthoceros agrestis HOM05D006149 ORTHO05D007341 5.0e-26 122.1 93 73.1
SMO364G0740 Selaginella moellendorffii HOM05D006149 ORTHO05D007341 2.5e-25 119.8 91 69.2
CANSAT25G0333 Cannabis sativa HOM05D006149 ORTHO05D007341 4.3e-25 119.0 71 84.5
Duzib248G1531 Durio zibethinus HOM05D006149 ORTHO05D007341 1.2e-24 117.5 127 59.1
SEGI_00829 Sequoiadendron giganteum HOM05D006149 ORTHO05D007341 1.2e-24 117.5 83 74.7
AUR62010304 Chenopodium quinoa HOM05D006149 ORTHO05D007341 2.8e-24 116.3 90 70.0
Pp3c1_15220 Physcomitrium patens HOM05D006149 ORTHO05D007341 3.0e-23 112.8 74 82.4
CBR_g44544 Chara braunii HOM05D006149 ORTHO05D007341 3.4e-22 109.4 80 75.0
Rhsim11G0160200 Rhododendron simsii HOM05D006149 ORTHO05D007341 9.8e-22 107.8 183 42.6
vmacro02004 Vaccinium macrocarpon HOM05D006149 ORTHO05D007341 9.8e-22 107.8 146 47.9
HanXRQChr02g0033021 Helianthus annuus HOM05D006149 ORTHO05D007341 1.3e-21 107.5 118 55.1
DCAR_001643 Daucus carota HOM05D006149 ORTHO05D007341 2.0e-19 100.1 92 62.0
Mapoly0056s0071 Marchantia polymorpha HOM05D006149 ORTHO05D007341 2.0e-19 100.1 95 61.1
EL10Ac9g22279 Beta vulgaris HOM05D006149 ORTHO05D007341 3.9e-18 95.9 106 54.7
PGR042G0697 Punica granatum HOM05D006149 ORTHO05D007341 5.6e-17 92.0 76 67.1
Ciclev10006213m.g Citrus clementina HOM05D006149 ORTHO05D007341 7.3e-17 91.7 101 51.5
Haze_10168 Corylus avellana HOM05D006149 ORTHO05D007341 1.4e-15 87.4 245 33.1
Actinidia05494 Actinidia chinensis HOM05D006149 ORTHO05D007341 1.1e-12 77.8 51 76.5
Cre03.g193150 Chlamydomonas reinhardtii HOM05D006149 ORTHO05D007341 2.4e-12 76.6 80 53.8
CSS0028016 Camellia sinensis var. sinensis HOM05D006149 ORTHO05D007341 5.4e-12 75.5 89 52.8
Ah.01g018230 Amaranthus hybridus HOM05D006149 ORTHO05D007341 3.9e-10 69.3 52 71.2
SMO197G0096 Selaginella moellendorffii HOM05D024641 ORTHO05D007341 1.1e-09 67.8 47 70.2
QL11p033903 Quercus lobata HOM05D006149 ORTHO05D007341 7.3e-09 65.1 45 75.6
MBI12_g27878_MAGBIO Magnolia biondii HOM05D006149 ORTHO05D007341 2.1e-08 63.5 91 41.8
MCO08G345 Micromonas commoda HOM05D006149 ORTHO05D007341 2.8e-08 63.2 67 50.7
TAR376G0787 Trochodendron aralioides HOM05D006149 ORTHO05D007341 2.8e-08 63.2 70 57.1
Lsat_1_v5_gn_5_63380 Lactuca sativa HOM05D000113 ORTHO05D012184 9.9e-06 54.7 48 58.3


User provided reference genes

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