Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI05066 Sapria himalayana HOM05D006481 ORTHO05D008160 8.5e-64 246.9 130 100.0
Manes.10G058310 Manihot esculenta HOM05D006481 ORTHO05D008160 1.6e-33 146.4 133 63.2
Cpa.g.sc106.79 Carica papaya HOM05D006481 ORTHO05D008160 1.7e-32 142.9 132 59.8
FAN15G2146 Fragaria x ananassa HOM05D006481 ORTHO05D008160 3.0e-32 142.1 132 62.1
FAN27G2785 Fragaria x ananassa HOM05D006481 ORTHO05D008160 3.9e-32 141.7 132 62.1
MD05G1096200 Malus domestica HOM05D006481 ORTHO05D008160 6.6e-32 141.0 133 60.9
RcHm_v2.0_Chr6g0252931 Rosa chinensis HOM05D006481 ORTHO05D008160 6.6e-32 141.0 132 62.1
vmacro01976 Vaccinium macrocarpon HOM05D006481 ORTHO05D008160 8.6e-32 140.6 127 60.6
Prupe.8G140600 Prunus persica HOM05D006481 ORTHO05D008160 1.1e-31 140.2 133 60.2
Aqoxy6G02732 Aquilegia oxysepala HOM05D006481 ORTHO05D008160 1.5e-31 139.8 130 58.5
FvH4_2g03900 Fragaria vesca HOM05D006481 ORTHO05D008160 2.5e-31 139.0 132 60.6
PSO541G1903 Papaver somniferum HOM05D006481 ORTHO05D008160 2.8e-30 135.6 128 59.4
PSO675G3182 Papaver somniferum HOM05D006481 ORTHO05D008160 2.8e-30 135.6 128 59.4
Cfa004657 Carpinus fangiana HOM05D006481 ORTHO05D008160 4.7e-30 134.8 133 58.6
TWI14G1262 Tripterygium wilfordii HOM05D006481 ORTHO05D008160 4.7e-30 134.8 136 59.6
GSVIVG01037865001 Vitis vinifera HOM05D006481 ORTHO05D008160 4.7e-30 134.8 133 55.6
CiPaw.05G015400 Carya illinoinensis HOM05D006481 ORTHO05D008160 6.2e-30 134.4 134 59.0
Dinv42219 Davidia involucrata HOM05D006481 ORTHO05D008160 6.2e-30 134.4 132 58.3
Thecc.02G113600 Theobroma cacao HOM05D006481 ORTHO05D008160 6.2e-30 134.4 132 57.6
Haze_10252 Corylus avellana HOM05D006481 ORTHO05D008160 8.1e-30 134.0 133 58.6
Actinidia34372 Actinidia chinensis HOM05D006481 ORTHO05D008160 1.4e-29 133.3 130 56.2
QL11p031947 Quercus lobata HOM05D006481 ORTHO05D008160 1.8e-29 132.9 132 56.8
COL.COLO4_32543 Corchorus olitorius HOM05D006481 ORTHO05D008160 5.2e-29 131.3 132 55.3
Potri.009G090900 Populus trichocarpa HOM05D006481 ORTHO05D008160 5.2e-29 131.3 133 57.9
CSS0020952 Camellia sinensis var. sinensis HOM05D006481 ORTHO05D008160 6.8e-29 131.0 130 56.9
CSS0029586 Camellia sinensis var. sinensis HOM05D006481 ORTHO05D008160 6.8e-29 131.0 130 56.9
Rhsim11G0154700 Rhododendron simsii HOM05D006481 ORTHO05D008160 6.8e-29 131.0 123 58.5
Sabra09G0070200 Salix brachista HOM05D006481 ORTHO05D008160 6.8e-29 131.0 133 57.1
TAR376G0872 Trochodendron aralioides HOM05D006481 ORTHO05D008160 6.8e-29 131.0 130 56.9
Atru.BG.62.p Acer truncatum HOM05D006481 ORTHO05D008160 8.9e-29 130.6 132 56.8
CsaV3_4G000490 Cucumis sativus L. HOM05D006481 ORTHO05D008160 8.9e-29 130.6 133 54.1
Lsat_1_v5_gn_5_114361 Lactuca sativa HOM05D006481 ORTHO05D008160 8.9e-29 130.6 126 57.1
RhsimUnG0125900 Rhododendron simsii HOM05D006481 ORTHO05D008160 8.9e-29 130.6 123 58.5
THA.LOC104825834 Tarenaya hassleriana HOM05D006481 ORTHO05D008160 1.5e-28 129.8 131 54.2
DCAR_021965 Daucus carota HOM05D006481 ORTHO05D008160 3.4e-28 128.6 134 55.2
Dinv15788 Davidia involucrata HOM05D006481 ORTHO05D008160 3.4e-28 128.6 131 56.5
Oeu021369.1 Olea europaea HOM05D006481 ORTHO05D008160 3.4e-28 128.6 129 55.8
MELO3C017986.2 Cucumis melo HOM05D006481 ORTHO05D008160 4.4e-28 128.3 132 53.8
Ciclev10027845m.g Citrus clementina HOM05D006481 ORTHO05D008160 5.8e-28 127.9 132 53.8
Duzib132G1015 Durio zibethinus HOM05D006481 ORTHO05D008160 5.8e-28 127.9 134 55.2
Lj5A217G88 Lonicera japonica HOM05D006481 ORTHO05D008160 7.5e-28 127.5 130 56.9
Ca_11047_v3 Cicer arietinum L. HOM05D006481 ORTHO05D008160 9.9e-28 127.1 132 55.3
Gohir.D12G020600 Gossypium hirsutum HOM05D006481 ORTHO05D008160 9.9e-28 127.1 132 54.5
Lj5g0022753 Lotus japonicus HOM05D006481 ORTHO05D008160 9.9e-28 127.1 132 53.8
TAR628G0609 Trochodendron aralioides HOM05D006481 ORTHO05D008160 9.9e-28 127.1 132 53.8
Potri.001G296700 Populus trichocarpa HOM05D006481 ORTHO05D008160 1.7e-27 126.3 132 56.1
Sed0008985 Sechium edule HOM05D006481 ORTHO05D008160 1.7e-27 126.3 133 52.6
VMungo0720G0067 Vigna mungo HOM05D006481 ORTHO05D008160 1.7e-27 126.3 132 53.8
Gohir.A12G020400 Gossypium hirsutum HOM05D006481 ORTHO05D008160 2.2e-27 125.9 132 53.0
Gorai.008G021000 Gossypium raimondii HOM05D006481 ORTHO05D008160 2.2e-27 125.9 132 53.0
Medtr1g106795 Medicago truncatula HOM05D006481 ORTHO05D008160 2.9e-27 125.6 132 54.5
ECA234G0568 Erigeron canadensis HOM05D006481 ORTHO05D008160 3.7e-27 125.2 130 55.4
TPR.G27130 Trifolium pratense HOM05D006481 ORTHO05D008160 3.7e-27 125.2 131 54.2
Nitab4.5_0001105g0200 Nicotiana tabacum HOM05D006481 ORTHO05D008160 4.9e-27 124.8 133 52.6
Sabra16G0185800 Salix brachista HOM05D006481 ORTHO05D008160 6.4e-27 124.4 128 56.2
Nitab4.5_0004685g0050 Nicotiana tabacum HOM05D006481 ORTHO05D008160 8.3e-27 124.0 133 52.6
Phvul.007G043300 Phaseolus vulgaris HOM05D006481 ORTHO05D008160 1.1e-26 123.6 134 53.0
Psat6g216240 Pisum sativum HOM05D006481 ORTHO05D008160 1.9e-26 122.9 127 55.1
Lalb_Chr02g0145111 Lupinus albus HOM05D006481 ORTHO05D008160 2.4e-26 122.5 132 51.5
ATR0030G005 Amborella trichopoda HOM05D006481 ORTHO05D008160 3.2e-26 122.1 131 58.0
arahy.Tifrunner.gnm1.ann1.IH69Y8 Arachis hypogaea HOM05D006481 ORTHO05D008160 3.2e-26 122.1 132 53.0
arahy.Tifrunner.gnm1.ann1.RQ9967 Arachis hypogaea HOM05D006481 ORTHO05D008160 3.2e-26 122.1 132 53.0
MSTRG.16692 Avicennia marina HOM05D006481 ORTHO05D008160 3.2e-26 122.1 130 55.4
CAN.G606.42 Capsicum annuum HOM05D006481 ORTHO05D008160 4.1e-26 121.7 133 51.1
CARHR039920 Cardamine hirsuta HOM05D006481 ORTHO05D008160 9.2e-26 120.6 131 51.9
Glyma.20G132200 Glycine max HOM05D006481 ORTHO05D008160 9.2e-26 120.6 132 50.8
Sopen01g049510 Solanum pennellii HOM05D006481 ORTHO05D008160 1.2e-25 120.2 133 50.4
Solyc01g107260.4 Solanum lycopersicum HOM05D006481 ORTHO05D008160 1.6e-25 119.8 133 49.6
SalBow6G0734 Salvia bowleyana HOM05D006481 ORTHO05D008160 2.7e-25 119.0 133 55.6
Sp1g36750 Schrenkiella parvula HOM05D006481 ORTHO05D008160 2.7e-25 119.0 131 51.1
Aa31LG10G4220 Aethionema arabicum HOM05D006481 ORTHO05D008160 4.6e-25 118.2 136 51.5
Cc02_g30880 Coffea canephora HOM05D006481 ORTHO05D008160 7.8e-25 117.5 130 51.5
AL1G57410 Arabidopsis lyrata HOM05D006481 ORTHO05D008160 1.0e-24 117.1 131 51.1
AT1G49870 Arabidopsis thaliana HOM05D006481 ORTHO05D008160 1.0e-24 117.1 131 51.1
Thhalv10011233m.g Eutrema salsugineum HOM05D006481 ORTHO05D008160 1.0e-24 117.1 131 51.1
unitig_744.g24217 Utricularia gibba HOM05D006481 ORTHO05D008160 2.3e-24 115.9 134 51.5
Peaxi162Scf00016g02732 Petunia axillaris HOM05D006481 ORTHO05D008160 3.0e-24 115.5 134 50.7
A08p03520 Brassica napus HOM05D006481 ORTHO05D008160 5.1e-24 114.8 133 49.6
C08p03680 Brassica napus HOM05D006481 ORTHO05D008160 5.1e-24 114.8 133 49.6
BraA08t32385Z Brassica rapa HOM05D006481 ORTHO05D008160 5.1e-24 114.8 133 48.9
EL10Ac8g19363 Beta vulgaris HOM05D006481 ORTHO05D008160 6.6e-24 114.4 130 50.0
BolC8t47171H Brassica oleracea HOM05D006481 ORTHO05D008160 6.6e-24 114.4 133 49.6
Carub.0001s3908 Capsella rubella HOM05D006481 ORTHO05D008160 1.1e-23 113.6 131 48.1
AUR62027350 Chenopodium quinoa HOM05D006481 ORTHO05D008160 1.9e-23 112.8 131 50.4
HanXRQChr16g0514441 Helianthus annuus HOM05D006481 ORTHO05D008160 1.9e-23 112.8 130 50.8
AUR62031332 Chenopodium quinoa HOM05D006481 ORTHO05D008160 2.5e-23 112.5 130 49.2
Os03g0604600 Oryza sativa ssp. japonica HOM05D006481 ORTHO05D008160 2.5e-23 112.5 129 48.1
BcaB04g17289 Brassica carinata HOM05D006481 ORTHO05D008160 4.3e-23 111.7 133 48.9
Migut.B00421 Erythranthe guttata HOM05D006481 ORTHO05D008160 4.3e-23 111.7 129 51.2
HPP92_017760 Vanilla planifolia HOM05D006481 ORTHO05D008160 4.3e-23 111.7 125 48.8
Ah.14g085520 Amaranthus hybridus HOM05D006481 ORTHO05D008160 5.6e-23 111.3 128 50.8
ClCG10G010570 Citrullus lanatus HOM05D006481 ORTHO05D008160 7.3e-23 110.9 132 48.5
SGA_v2.0_scaffold225G43011 Striga asiatica HOM05D006481 ORTHO05D008160 9.5e-23 110.5 128 52.3
Zm00001eb050130 Zea mays HOM05D006481 ORTHO05D008160 1.2e-22 110.2 129 47.3
SEGI_11188 Sequoiadendron giganteum HOM05D006481 ORTHO05D008160 2.0e-20 102.8 130 46.9
SEGI_37018 Sequoiadendron giganteum HOM05D006481 ORTHO05D008160 2.0e-20 102.8 130 46.9
CDE04G1272 Ceratophyllum demersum HOM05D006481 ORTHO05D008160 2.9e-19 99.0 89 62.9
Eucgr.I01079 Eucalyptus grandis HOM05D006481 ORTHO05D008160 1.7e-16 89.7 102 50.0
Pp3c18_18840 Physcomitrium patens HOM05D006481 ORTHO05D008160 1.7e-16 89.7 128 44.5
SEGI_25924 Sequoiadendron giganteum HOM05D006481 ORTHO05D008160 4.8e-14 81.6 133 42.9
MD10G1102400 Malus domestica HOM05D006481 ORTHO05D008160 1.4e-13 80.1 100 51.0
SMO196G0099 Selaginella moellendorffii HOM05D006481 ORTHO05D008160 1.5e-12 76.6 130 41.5
PGSC0003DMG400025848 Solanum tuberosum HOM05D006481 ORTHO05D008160 1.9e-10 69.7 116 37.9
CBR_g49330 Chara braunii HOM05D006481 ORTHO05D008160 2.4e-10 69.3 92 42.4


User provided reference genes

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