Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI05037 Sapria himalayana HOM05D003173 ORTHO05D003546 2.0e-118 429.1 210 100.0
SHI13075 Sapria himalayana HOM05D003173 ORTHO05D003546 4.1e-116 421.4 210 98.6
SHI08021 Sapria himalayana HOM05D003173 ORTHO05D003546 2.0e-115 419.1 210 98.1
SHI27843 Sapria himalayana HOM05D003173 ORTHO05D003546 2.7e-91 339.0 171 97.1
Manes.18G009300 Manihot esculenta HOM05D003173 ORTHO05D003546 5.5e-28 128.6 234 40.6
Duzib093G0730 Durio zibethinus HOM05D003173 ORTHO05D003546 5.1e-26 122.1 215 40.9
Thecc.08G051800 Theobroma cacao HOM05D003173 ORTHO05D003546 5.7e-25 118.6 213 38.5
Gohir.A05G182800 Gossypium hirsutum HOM05D003173 ORTHO05D003546 9.7e-25 117.9 219 41.6
COL.COLO4_26083 Corchorus olitorius HOM05D003173 ORTHO05D003546 3.7e-24 115.9 214 38.3
Gorai.009G191200 Gossypium raimondii HOM05D003173 ORTHO05D003546 1.1e-23 114.4 219 39.7
Duzib116G0616 Durio zibethinus HOM05D003173 ORTHO05D003546 4.1e-23 112.5 219 36.1
CiPaw.07G143600 Carya illinoinensis HOM05D003173 ORTHO05D003546 5.3e-23 112.1 226 36.3
TAR628G1607 Trochodendron aralioides HOM05D003173 ORTHO05D003546 5.3e-23 112.1 213 38.0
Manes.05G142500 Manihot esculenta HOM05D003173 ORTHO05D003546 6.9e-23 111.7 214 37.4
Potri.002G016500 Populus trichocarpa HOM05D003173 ORTHO05D003546 3.4e-22 109.4 219 37.9
TAR376G0945 Trochodendron aralioides HOM05D003173 ORTHO05D003546 4.5e-22 109.0 215 35.8
Potri.005G245600 Populus trichocarpa HOM05D003173 ORTHO05D003546 7.7e-22 108.2 208 37.0
Actinidia15462 Actinidia chinensis HOM05D003173 ORTHO05D003546 2.9e-21 106.3 210 36.2
TWI12G1263 Tripterygium wilfordii HOM05D003173 ORTHO05D003546 6.5e-21 105.1 217 38.7
Sabra02G0013200 Salix brachista HOM05D003173 ORTHO05D003546 1.4e-20 104.0 220 36.8
Psat6g001080 Pisum sativum HOM05D003173 ORTHO05D003546 1.9e-20 103.6 224 34.8
Sabra05G0189700 Salix brachista HOM05D003173 ORTHO05D003546 1.9e-20 103.6 220 36.4
Dinv39556 Davidia involucrata HOM05D003173 ORTHO05D003546 5.5e-20 102.1 193 38.9
TWI56G0288 Tripterygium wilfordii HOM05D003173 ORTHO05D003546 1.2e-19 100.9 218 38.1
Aqoxy6G01958 Aquilegia oxysepala HOM05D003173 ORTHO05D003546 2.1e-19 100.1 218 36.2
CSS0006148 Camellia sinensis var. sinensis HOM05D003173 ORTHO05D003546 2.1e-19 100.1 224 34.8
Ciclev10002153m.g Citrus clementina HOM05D003173 ORTHO05D003546 2.7e-19 99.8 240 33.3
Prupe.1G359400 Prunus persica HOM05D003173 ORTHO05D003546 2.7e-19 99.8 229 36.7
Phvul.001G002200 Phaseolus vulgaris HOM05D003173 ORTHO05D003546 4.6e-19 99.0 221 34.4
Gohir.D05G185800 Gossypium hirsutum HOM05D003173 ORTHO05D003546 6.1e-19 98.6 219 36.1
Cpa.g.sc26.264 Carica papaya HOM05D003173 ORTHO05D003546 1.8e-18 97.1 216 36.6
MSTRG.24229 Avicennia marina HOM05D003173 ORTHO05D003546 2.3e-18 96.7 221 35.7
Cc10_g01130 Coffea canephora HOM05D003173 ORTHO05D003546 2.3e-18 96.7 237 32.5
QL02p012938 Quercus lobata HOM05D003173 ORTHO05D003546 2.3e-18 96.7 239 32.6
Cfa014008 Carpinus fangiana HOM05D003173 ORTHO05D003546 3.0e-18 96.3 229 37.6
Nn6g31907 Nelumbo nucifera HOM05D003173 ORTHO05D003546 3.9e-18 95.9 224 36.2
Gohir.A05G255800 Gossypium hirsutum HOM05D003173 ORTHO05D003546 5.1e-18 95.5 219 34.2
Migut.N03186 Erythranthe guttata HOM05D003173 ORTHO05D003546 8.8e-18 94.7 231 34.6
Gorai.009G268900 Gossypium raimondii HOM05D003173 ORTHO05D003546 1.5e-17 94.0 215 34.4
Sopen04g035610 Solanum pennellii HOM05D003173 ORTHO05D003546 2.5e-17 93.2 220 34.5
TAR381G1677 Trochodendron aralioides HOM05D003173 ORTHO05D003546 2.5e-17 93.2 212 34.9
Gohir.D05G257500 Gossypium hirsutum HOM05D003173 ORTHO05D003546 3.3e-17 92.8 217 34.1
Medtr1g026110 Medicago truncatula HOM05D003173 ORTHO05D003546 3.3e-17 92.8 226 31.9
Peaxi162Scf00744g00026 Petunia axillaris HOM05D003173 ORTHO05D003546 3.3e-17 92.8 218 35.3
CANSAT25G2829 Cannabis sativa HOM05D003173 ORTHO05D003546 4.3e-17 92.4 240 31.7
VMungo0647G1822 Vigna mungo HOM05D003173 ORTHO05D003546 4.3e-17 92.4 214 32.2
Peaxi162Scf00174g00083 Petunia axillaris HOM05D003173 ORTHO05D003546 5.7e-17 92.0 218 33.9
Solyc04g081960.1 Solanum lycopersicum HOM05D003173 ORTHO05D003546 2.2e-16 90.1 217 33.6
Haze_22703 Corylus avellana HOM05D003173 ORTHO05D003546 2.8e-16 89.7 231 35.1
VMungo1309G1265 Vigna mungo HOM05D003173 ORTHO05D003546 2.8e-16 89.7 240 36.2
CiPaw.08G069200 Carya illinoinensis HOM05D003173 ORTHO05D003546 4.8e-16 89.0 229 34.5
Glyma.14G222400 Glycine max HOM05D003173 ORTHO05D003546 8.2e-16 88.2 213 31.9
Actinidia37954 Actinidia chinensis HOM05D003173 ORTHO05D003546 1.4e-15 87.4 208 34.6
Oeu026120.1 Olea europaea HOM05D003173 ORTHO05D003546 1.8e-15 87.0 213 37.1
Eucgr.J02492 Eucalyptus grandis HOM05D003173 ORTHO05D003546 3.1e-15 86.3 223 34.5
CSS0021479 Camellia sinensis var. sinensis HOM05D003173 ORTHO05D003546 4.1e-15 85.9 212 31.6
SGA_v2.0_scaffold19G08585 Striga asiatica HOM05D003173 ORTHO05D003546 4.1e-15 85.9 204 35.8
CSS0028811 Camellia sinensis var. sinensis HOM05D003173 ORTHO05D003546 5.3e-15 85.5 212 31.6
FAN27G2702 Fragaria x ananassa HOM05D003173 ORTHO05D003546 6.9e-15 85.1 220 34.1
Rhsim06G0012200 Rhododendron simsii HOM05D003173 ORTHO05D003546 6.9e-15 85.1 223 34.1
Lalb_Chr03g0033561 Lupinus albus HOM05D003173 ORTHO05D003546 9.1e-15 84.7 242 32.2
Phvul.009G019900 Phaseolus vulgaris HOM05D003173 ORTHO05D003546 1.2e-14 84.3 242 33.9
Lalb_Chr23g0265991 Lupinus albus HOM05D003173 ORTHO05D003546 1.5e-14 84.0 214 31.3
Lalb_Chr19g0131611 Lupinus albus HOM05D003173 ORTHO05D003546 2.6e-14 83.2 249 29.7
PGR031G0086 Punica granatum HOM05D003173 ORTHO05D003546 2.6e-14 83.2 238 31.1
arahy.Tifrunner.gnm1.ann1.S3QWAM Arachis hypogaea HOM05D003173 ORTHO05D003546 3.4e-14 82.8 243 31.7
Glyma.04G020700 Glycine max HOM05D003173 ORTHO05D003546 3.4e-14 82.8 239 33.1
Medtr3g114750 Medicago truncatula HOM05D003173 ORTHO05D003546 4.5e-14 82.4 220 32.3
PGSC0003DMG400009955 Solanum tuberosum HOM05D003173 ORTHO05D003546 4.5e-14 82.4 227 32.2
MELO3C003727.2 Cucumis melo HOM05D003173 ORTHO05D003546 5.9e-14 82.0 210 35.2
Actinidia29769 Actinidia chinensis HOM05D000228 ORTHO05D001545 7.7e-14 81.6 211 32.2
FvH4_2g37950 Fragaria vesca HOM05D003173 ORTHO05D003546 7.7e-14 81.6 222 35.6
FAN20G0850 Fragaria x ananassa HOM05D003173 ORTHO05D003546 7.7e-14 81.6 220 34.1
arahy.Tifrunner.gnm1.ann1.YK013F Arachis hypogaea HOM05D003173 ORTHO05D003546 1.0e-13 81.3 214 31.8
Dinv31893 Davidia involucrata HOM05D003173 ORTHO05D003546 1.0e-13 81.3 214 34.1
Nn5g30846 Nelumbo nucifera HOM05D003173 ORTHO05D003546 1.0e-13 81.3 221 33.5
THA.LOC104811444 Tarenaya hassleriana HOM05D003173 ORTHO05D003546 1.0e-13 81.3 225 32.4
vmacro04379 Vaccinium macrocarpon HOM05D003173 ORTHO05D003546 1.7e-13 80.5 208 31.7
Lsat_1_v5_gn_8_29221 Lactuca sativa HOM05D003173 ORTHO05D003546 2.2e-13 80.1 271 28.8
Carub.0002s2296 Capsella rubella HOM05D003173 ORTHO05D003546 2.9e-13 79.7 235 31.5
RcHm_v2.0_Chr6g0303671 Rosa chinensis HOM05D003173 ORTHO05D003546 2.9e-13 79.7 222 36.0
Glyma.06G020800 Glycine max HOM05D003173 ORTHO05D003546 3.8e-13 79.3 238 33.6
CARHR069610 Cardamine hirsuta HOM05D003173 ORTHO05D003546 5.0e-13 79.0 238 31.5
AT1G76070 Arabidopsis thaliana HOM05D003173 ORTHO05D003546 1.1e-12 77.8 247 30.8
Thhalv10009337m.g Eutrema salsugineum HOM05D003173 ORTHO05D003546 1.1e-12 77.8 229 32.3
PGSC0003DMG400029419 Solanum tuberosum HOM05D003173 ORTHO05D003546 1.1e-12 77.8 225 32.0
TPR.G26427 Trifolium pratense HOM05D003173 ORTHO05D003546 1.4e-12 77.4 232 32.8
BcaB07g32036 Brassica carinata HOM05D003173 ORTHO05D003546 1.9e-12 77.0 226 33.2
ClCG05G015410 Citrullus lanatus HOM05D003173 ORTHO05D003546 1.9e-12 77.0 206 34.5
Glyma.17G261300 Glycine max HOM05D003173 ORTHO05D003546 1.9e-12 77.0 209 34.0
MBI09_g01020_MAGBIO Magnolia biondii HOM05D003173 ORTHO05D003546 2.5e-12 76.6 220 36.4
Sp5g31190 Schrenkiella parvula HOM05D003173 ORTHO05D003546 2.5e-12 76.6 242 29.8
Hma1.2p1_0023F.1_g015790 Hydrangea macrophylla HOM05D003173 ORTHO05D003546 3.2e-12 76.3 200 30.5
EL10Ac1g02082 Beta vulgaris HOM05D003173 ORTHO05D003546 4.2e-12 75.9 238 30.3
ATR0661G366 Amborella trichopoda HOM05D003173 ORTHO05D003546 5.5e-12 75.5 228 31.1
arahy.Tifrunner.gnm1.ann1.WLLD0D Arachis hypogaea HOM05D003173 ORTHO05D003546 7.2e-12 75.1 238 30.7
FAN15G3480 Fragaria x ananassa HOM05D003173 ORTHO05D003546 7.2e-12 75.1 221 32.6
BraA02t07073Z Brassica rapa HOM05D003173 ORTHO05D003546 9.4e-12 74.7 238 29.4
BraA06t24743Z Brassica rapa HOM05D003173 ORTHO05D003546 1.2e-11 74.3 226 33.2
Oeu051144.1 Olea europaea HOM05D003173 ORTHO05D003546 1.2e-11 74.3 205 31.2
Solyc12g094390.1 Solanum lycopersicum HOM05D003173 ORTHO05D003546 1.2e-11 74.3 219 33.3
AL2G36110 Arabidopsis lyrata HOM05D003173 ORTHO05D003546 1.6e-11 73.9 248 29.8
DCAR_016740 Daucus carota HOM05D000228 ORTHO05D001545 1.6e-11 73.9 257 30.4
Sp1g18040 Schrenkiella parvula HOM05D003173 ORTHO05D003546 1.6e-11 73.9 224 30.8
Sopen12g031280 Solanum pennellii HOM05D003173 ORTHO05D003546 1.6e-11 73.9 220 30.0
Peaxi162Scf00064g00081 Petunia axillaris HOM05D003173 ORTHO05D003546 2.1e-11 73.6 225 28.4
HanXRQChr14g0428491 Helianthus annuus HOM05D003173 ORTHO05D003546 2.7e-11 73.2 237 29.5
BcaC05g25935 Brassica carinata HOM05D003173 ORTHO05D003546 3.6e-11 72.8 223 31.4
A06p16390 Brassica napus HOM05D003173 ORTHO05D003546 3.6e-11 72.8 226 32.7
C05p18890 Brassica napus HOM05D003173 ORTHO05D003546 3.6e-11 72.8 223 31.4
Ca_13485_v3 Cicer arietinum L. HOM05D003173 ORTHO05D003546 3.6e-11 72.8 227 31.7
Nitab4.5_0000498g0080 Nicotiana tabacum HOM05D003173 ORTHO05D003546 3.6e-11 72.8 214 32.2
AL1G33140 Arabidopsis lyrata HOM05D003173 ORTHO05D003546 4.7e-11 72.4 224 30.8
CsaV3_3G046130 Cucumis sativus L. HOM05D003173 ORTHO05D003546 4.7e-11 72.4 179 36.9
Psat5g012200 Pisum sativum HOM05D003173 ORTHO05D003546 4.7e-11 72.4 213 31.0
Carub.0001s1981 Capsella rubella HOM05D003173 ORTHO05D003546 6.1e-11 72.0 227 31.3
Sc15g0004670 Simmondsia chinensis HOM05D003173 ORTHO05D003546 6.1e-11 72.0 217 31.3
BraA07t31692Z Brassica rapa HOM05D003173 ORTHO05D003546 7.9e-11 71.6 238 29.8
Lj5g0013533 Lotus japonicus HOM05D003173 ORTHO05D003546 7.9e-11 71.6 236 29.7
BcaC08g47100 Brassica carinata HOM05D003173 ORTHO05D003546 1.0e-10 71.2 242 28.5
TPR.G38194 Trifolium pratense HOM05D003173 ORTHO05D003546 1.0e-10 71.2 215 29.3
Migut.C00894 Erythranthe guttata HOM05D003173 ORTHO05D003546 1.4e-10 70.9 216 32.4
BolC5t30588H Brassica oleracea HOM05D003173 ORTHO05D003546 1.8e-10 70.5 223 30.9
Aa31LG4G6190 Aethionema arabicum HOM05D003173 ORTHO05D003546 2.3e-10 70.1 256 28.9
BolC6t40040H Brassica oleracea HOM05D003173 ORTHO05D003546 2.3e-10 70.1 245 30.6
SalBow7G1496 Salvia bowleyana HOM05D003173 ORTHO05D003546 2.3e-10 70.1 208 34.1
Hma1.2p1_1598F.1_g292960 Hydrangea macrophylla HOM05D003173 ORTHO05D003546 3.0e-10 69.7 194 32.5
PSO541G5041 Papaver somniferum HOM05D003173 ORTHO05D003546 3.0e-10 69.7 226 26.5
BraA07t29310Z Brassica rapa HOM05D003173 ORTHO05D003546 5.1e-10 68.9 217 30.4
A02p20410 Brassica napus HOM05D003173 ORTHO05D003546 6.7e-10 68.6 235 28.5
Thhalv10018992m.g Eutrema salsugineum HOM05D003173 ORTHO05D003546 6.7e-10 68.6 248 29.8
Lsat_1_v5_gn_2_6961 Lactuca sativa HOM05D003173 ORTHO05D003546 6.7e-10 68.6 269 29.0
Lalb_Chr08g0246301 Lupinus albus HOM05D003173 ORTHO05D003546 6.7e-10 68.6 189 30.7
Nitab4.5_0002353g0090 Nicotiana tabacum HOM05D003173 ORTHO05D003546 6.7e-10 68.6 214 31.3
A07p41630 Brassica napus HOM05D003173 ORTHO05D003546 8.8e-10 68.2 246 30.5
A07p15740 Brassica napus HOM05D003173 ORTHO05D003546 1.1e-09 67.8 218 29.8
Atru.chr13.216 Acer truncatum HOM05D003173 ORTHO05D003546 1.5e-09 67.4 209 29.7
A07p15840 Brassica napus HOM05D003173 ORTHO05D003546 1.5e-09 67.4 217 30.4
CDE05G3154 Ceratophyllum demersum HOM05D001535 ORTHO05D003710 1.5e-09 67.4 196 33.7
Nitab4.5_0003030g0080 Nicotiana tabacum HOM05D003173 ORTHO05D003546 3.3e-09 66.2 169 33.1
ECA233G2815 Erigeron canadensis HOM05D003173 ORTHO05D003546 5.7e-09 65.5 261 26.8
CAN.G401.21 Capsicum annuum HOM05D003173 ORTHO05D003546 7.4e-09 65.1 229 29.3
ECA238G0569 Erigeron canadensis HOM05D000315 ORTHO05D000527 7.4e-09 65.1 250 28.0
BcaC03g15643 Brassica carinata HOM05D003173 ORTHO05D003546 9.7e-09 64.7 235 28.1
BolC2t09356H Brassica oleracea HOM05D003173 ORTHO05D003546 9.7e-09 64.7 235 28.1
C02p33480 Brassica napus HOM05D003173 ORTHO05D003546 1.7e-08 63.9 235 28.1
BolC7t42850H Brassica oleracea HOM05D003173 ORTHO05D003546 1.7e-08 63.9 219 29.2
HPP92_002481 Vanilla planifolia HOM05D003173 ORTHO05D003546 1.7e-08 63.9 197 29.4
HanXRQChr12g0366681 Helianthus annuus HOM05D003173 ORTHO05D003546 2.8e-08 63.2 201 29.9
BcaB03g14324 Brassica carinata HOM05D003173 ORTHO05D003546 4.8e-08 62.4 215 29.3
BcaNung03372 Brassica carinata HOM05D003173 ORTHO05D003546 4.8e-08 62.4 219 29.2
C07p23130 Brassica napus HOM05D003173 ORTHO05D003546 4.8e-08 62.4 219 29.2
unitig_748.g7605 Utricularia gibba HOM05D003173 ORTHO05D003546 6.3e-08 62.0 211 28.0
AT1G20310 Arabidopsis thaliana HOM05D003173 ORTHO05D003546 8.2e-08 61.6 226 29.2
Lj4g0000766 Lotus japonicus HOM05D003173 ORTHO05D003546 1.1e-07 61.2 144 29.2
MBI17_g07971_MAGBIO Magnolia biondii HOM05D003173 ORTHO05D003546 1.1e-07 61.2 181 27.1
Potri.005G107500 Populus trichocarpa HOM05D003173 ORTHO05D003546 3.1e-07 59.7 208 29.3
Aa31LG7G4670 Aethionema arabicum HOM05D003173 ORTHO05D003546 5.3e-07 58.9 190 30.5
Duzib264G0532 Durio zibethinus HOM05D003173 ORTHO05D003546 5.3e-07 58.9 130 33.8
unitig_32.g11393 Utricularia gibba HOM05D002221 ORTHO05D002626 5.3e-07 58.9 208 27.9
arahy.Tifrunner.gnm1.ann1.L00MPK Arachis hypogaea HOM05D003173 ORTHO05D003546 7.0e-07 58.5 156 28.2
Thecc.01G011100 Theobroma cacao HOM05D003173 ORTHO05D003546 9.1e-07 58.2 135 35.6
PSO675G7160 Papaver somniferum HOM05D003173 ORTHO05D003546 1.2e-06 57.8 232 27.2
BcaC08g47302 Brassica carinata HOM05D003173 ORTHO05D003546 4.5e-06 55.8 191 29.8
Lalb_Chr01g0008491 Lupinus albus HOM05D003173 ORTHO05D003546 5.9e-06 55.5 215 28.8
Oeu057579.1 Olea europaea HOM05D003173 ORTHO05D003546 5.9e-06 55.5 203 27.6


User provided reference genes

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