Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI05005 Sapria himalayana HOM05D002876 ORTHO05D000106 1.1e-56 223.0 110 100.0
SHI24795 Sapria himalayana HOM05D002876 ORTHO05D000106 4.0e-30 134.8 93 73.1
SHI05275 Sapria himalayana HOM05D001404 ORTHO05D009009 8.3e-28 127.1 93 69.9
SHI15236 Sapria himalayana HOM05D002876 ORTHO05D000106 7.1e-27 124.0 93 72.0
SHI45281 Sapria himalayana HOM05D000176 ORTHO05D000106 9.2e-27 123.6 93 66.7
SHI19007 Sapria himalayana HOM05D002876 ORTHO05D000106 2.1e-26 122.5 97 64.9
SHI26138 Sapria himalayana HOM05D000176 ORTHO05D000106 3.5e-26 121.7 91 70.3
SHI22148 Sapria himalayana HOM05D000176 ORTHO05D000106 6.6e-25 117.5 78 75.6
SHI22591 Sapria himalayana HOM05D002876 ORTHO05D000106 2.5e-24 115.5 82 72.0
SHI06307 Sapria himalayana HOM05D002876 ORTHO05D000106 1.6e-23 112.8 92 68.5
SHI17080 Sapria himalayana HOM05D002876 ORTHO05D000106 1.6e-23 112.8 86 67.4
SHI07655 Sapria himalayana HOM05D002876 ORTHO05D007253 3.6e-23 111.7 87 70.1
SHI34850 Sapria himalayana HOM05D000176 ORTHO05D000106 1.5e-21 106.3 93 62.4
SHI32832 Sapria himalayana HOM05D002876 ORTHO05D000106 4.9e-20 101.3 104 58.7
SHI18678 Sapria himalayana HOM05D002876 ORTHO05D000106 7.1e-19 97.4 93 61.3
SHI28494 Sapria himalayana HOM05D002876 ORTHO05D000106 1.6e-18 96.3 75 70.7
SHI05518 Sapria himalayana HOM05D002876 ORTHO05D000106 2.1e-18 95.9 70 70.0
SHI09521 Sapria himalayana HOM05D002876 ORTHO05D000106 2.1e-18 95.9 69 71.0
SHI21406 Sapria himalayana HOM05D002876 ORTHO05D000106 2.1e-18 95.9 78 64.1
SHI15051 Sapria himalayana HOM05D002876 ORTHO05D000106 2.7e-18 95.5 63 71.4
SHI07397 Sapria himalayana HOM05D002876 ORTHO05D000106 7.8e-18 94.0 66 69.7
SHI17934 Sapria himalayana HOM05D002876 ORTHO05D000013 2.1e-15 85.9 68 67.6
SHI28069 Sapria himalayana HOM05D002876 ORTHO05D000106 6.2e-15 84.3 89 53.9
QL02p103239 Quercus lobata HOM05D000176 ORTHO05D000106 2.4e-14 82.4 94 46.8
SHI45571 Sapria himalayana HOM05D002876 ORTHO05D000106 1.5e-13 79.7 93 51.6
SHI10958 Sapria himalayana HOM05D002876 ORTHO05D000106 5.8e-13 77.8 55 74.5
MELO3C022946.2 Cucumis melo HOM05D000176 ORTHO05D000106 9.9e-13 77.0 94 41.5
ClCG11G000230 Citrullus lanatus HOM05D000176 ORTHO05D000106 1.7e-12 76.3 94 40.4
SHI18159 Sapria himalayana HOM05D002876 ORTHO05D000106 3.8e-12 75.1 90 50.0
SHI05422 Sapria himalayana HOM05D002876 ORTHO05D000013 4.9e-12 74.7 52 73.1
CsaV3_5G015580 Cucumis sativus L. HOM05D000176 ORTHO05D000106 8.4e-12 73.9 94 40.4
SHI34039 Sapria himalayana HOM05D002876 ORTHO05D000106 1.1e-11 73.6 93 51.6
GSVIVG01026490001 Vitis vinifera HOM05D000176 ORTHO05D000106 1.9e-11 72.8 94 41.5
MELO3C033541.2 Cucumis melo HOM05D000176 ORTHO05D000106 2.4e-11 72.4 91 44.0
Sed0014738 Sechium edule HOM05D000176 ORTHO05D000106 2.4e-11 72.4 94 41.5
THA.LOC104802612 Tarenaya hassleriana HOM05D000176 ORTHO05D003511 3.2e-11 72.0 92 43.5
AT1G48120 Arabidopsis thaliana HOM05D000176 ORTHO05D003511 4.2e-11 71.6 92 42.4
Rhsim10G0079000 Rhododendron simsii HOM05D000176 ORTHO05D003511 4.2e-11 71.6 95 43.2
SHI37668 Sapria himalayana HOM05D002876 ORTHO05D000106 7.1e-11 70.9 49 75.5
AL1G54690 Arabidopsis lyrata HOM05D000176 ORTHO05D003511 9.3e-11 70.5 92 41.3
CSS0027273 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 9.3e-11 70.5 91 39.6
CsaV3_5G039840 Cucumis sativus L. HOM05D000176 ORTHO05D000106 1.2e-10 70.1 91 42.9
Thhalv10011184m.g Eutrema salsugineum HOM05D000176 ORTHO05D003511 1.2e-10 70.1 92 42.4
SHI06849 Sapria himalayana HOM05D000002 ORTHO05D000001 2.1e-10 69.3 87 50.6
SHI49011 Sapria himalayana HOM05D002876 ORTHO05D000106 2.1e-10 69.3 53 69.8
CSS0034390 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 2.7e-10 68.9 94 36.2
Carub.0001s3722 Capsella rubella HOM05D000176 ORTHO05D003511 2.7e-10 68.9 92 41.3
MELO3C027326.2 Cucumis melo HOM05D000176 ORTHO05D000106 2.7e-10 68.9 91 41.8
Sp1g35090 Schrenkiella parvula HOM05D000176 ORTHO05D003511 2.7e-10 68.9 92 40.2
A06p04680 Brassica napus HOM05D000176 ORTHO05D003511 3.5e-10 68.6 92 42.4
BraA06t23671Z Brassica rapa HOM05D000176 ORTHO05D003511 3.5e-10 68.6 92 42.4
Aa31LG10G5620 Aethionema arabicum HOM05D000176 ORTHO05D003511 4.6e-10 68.2 91 41.8
ClCG06G006800 Citrullus lanatus HOM05D000176 ORTHO05D000013 6.0e-10 67.8 91 42.9
SHI33904 Sapria himalayana HOM05D002876 ORTHO05D000106 6.0e-10 67.8 88 48.9
C06p02530 Brassica napus HOM05D000176 ORTHO05D003511 7.8e-10 67.4 92 41.3
CARHR037760 Cardamine hirsuta HOM05D000176 ORTHO05D003511 1.0e-09 67.0 92 40.2
BolC6t35381H Brassica oleracea HOM05D000176 ORTHO05D003511 2.3e-09 65.9 92 40.2
TWI09G0001 Tripterygium wilfordii HOM05D000176 ORTHO05D000106 3.9e-09 65.1 92 43.5
TWI31G0542 Tripterygium wilfordii HOM05D000176 ORTHO05D000106 3.9e-09 65.1 92 43.5
TWI75G1856 Tripterygium wilfordii HOM05D000176 ORTHO05D000106 3.9e-09 65.1 92 43.5
TWI56G0332 Tripterygium wilfordii HOM05D000176 ORTHO05D000106 5.1e-09 64.7 92 43.5
CSS0017719 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 6.6e-09 64.3 92 35.9
TWI38G1670 Tripterygium wilfordii HOM05D000176 ORTHO05D000106 6.6e-09 64.3 92 38.0
SHI18201 Sapria himalayana HOM05D000176 ORTHO05D000106 8.7e-09 63.9 91 44.0
SHI20232 Sapria himalayana HOM05D002876 ORTHO05D000106 8.7e-09 63.9 51 66.7
SHI27674 Sapria himalayana HOM05D002876 ORTHO05D000106 1.1e-08 63.5 99 48.5
SHI01671 Sapria himalayana HOM05D000176 ORTHO05D000106 1.5e-08 63.2 42 69.0
ClCG09G013770 Citrullus lanatus HOM05D000176 ORTHO05D000106 1.9e-08 62.8 91 39.6
SHI46056 Sapria himalayana HOM05D002876 ORTHO05D000106 1.9e-08 62.8 51 64.7
SHI46131 Sapria himalayana HOM05D002876 ORTHO05D000106 1.9e-08 62.8 51 64.7
TWI36G1460 Tripterygium wilfordii HOM05D000176 ORTHO05D000106 2.5e-08 62.4 89 39.3
CSS0031580 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 3.3e-08 62.0 84 35.7
MELO3C027925.2 Cucumis melo HOM05D000176 ORTHO05D000106 3.3e-08 62.0 91 40.7
MELO3C029627.2 Cucumis melo HOM05D000176 ORTHO05D000106 3.3e-08 62.0 91 38.5
SHI03958 Sapria himalayana HOM05D002876 ORTHO05D000106 3.3e-08 62.0 70 48.6
SHI49466 Sapria himalayana HOM05D002876 ORTHO05D000106 4.3e-08 61.6 85 47.1
CSS0025783 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 5.6e-08 61.2 95 37.9
CSS0037304 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 5.6e-08 61.2 95 37.9
SHI08737 Sapria himalayana HOM05D028255 ORTHO05D000106 5.6e-08 61.2 44 68.2
CSS0021846 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 7.3e-08 60.8 95 37.9
CSS0043966 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 7.3e-08 60.8 95 37.9
CSS0045961 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 7.3e-08 60.8 95 37.9
Sabra02G0169600 Salix brachista HOM05D000176 ORTHO05D000106 1.3e-07 60.1 89 38.2
SHI18296 Sapria himalayana HOM05D002876 ORTHO05D000106 1.3e-07 60.1 93 44.1
SHI36810 Sapria himalayana HOM05D000624 ORTHO05D002255 1.3e-07 60.1 47 70.2
MELO3C029728.2 Cucumis melo HOM05D000176 ORTHO05D000106 1.6e-07 59.7 91 38.5
MELO3C030021.2 Cucumis melo HOM05D000176 ORTHO05D000106 1.6e-07 59.7 71 45.1
MELO3C033724.2 Cucumis melo HOM05D000176 ORTHO05D000106 1.6e-07 59.7 90 40.0
Ah.02g116630 Amaranthus hybridus HOM05D000176 ORTHO05D000106 2.1e-07 59.3 99 40.4
CSS0047343 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 2.1e-07 59.3 85 36.5
CARHR102890 Cardamine hirsuta HOM05D000176 ORTHO05D000106 2.1e-07 59.3 89 36.0
SHI18944 Sapria himalayana HOM05D002876 ORTHO05D000106 2.1e-07 59.3 93 41.9
Solyc05g056010.3 Solanum lycopersicum HOM05D000176 ORTHO05D000106 2.1e-07 59.3 89 34.8
Sopen05g034420 Solanum pennellii HOM05D000176 ORTHO05D000106 2.1e-07 59.3 89 34.8
PGSC0003DMG400023346 Solanum tuberosum HOM05D000176 ORTHO05D000106 2.1e-07 59.3 89 34.8
arahy.Tifrunner.gnm1.ann1.6TXF5J Arachis hypogaea HOM05D000176 ORTHO05D000106 3.6e-07 58.5 89 40.4
CSS0002500 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 3.6e-07 58.5 89 34.8
CSS0014815 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 3.6e-07 58.5 89 34.8
CSS0030596 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 3.6e-07 58.5 84 35.7
Aa31sc575G20 Aethionema arabicum HOM05D000176 ORTHO05D000106 4.8e-07 58.2 89 36.0
arahy.Tifrunner.gnm1.ann1.PINR01 Arachis hypogaea HOM05D000176 ORTHO05D000106 4.8e-07 58.2 89 39.3
CSS0048548 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 4.8e-07 58.2 91 33.0
Sc17g0005870 Simmondsia chinensis HOM05D000176 ORTHO05D000106 4.8e-07 58.2 90 43.3
GSVIVG01017117001 Vitis vinifera HOM05D000176 ORTHO05D003511 4.8e-07 58.2 89 36.0
CSS0044124 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 6.2e-07 57.8 95 36.8
Ciclev10014335m.g Citrus clementina HOM05D000176 ORTHO05D000106 6.2e-07 57.8 89 38.2
RhsimUnG0135500 Rhododendron simsii HOM05D010733 ORTHO05D000106 6.2e-07 57.8 98 37.8
SHI35342 Sapria himalayana HOM05D002876 ORTHO05D000106 6.2e-07 57.8 39 66.7
MELO3C030761.2 Cucumis melo HOM05D000176 ORTHO05D000106 8.1e-07 57.4 89 38.2
QL04p000617 Quercus lobata HOM05D003810 ORTHO05D004416 8.1e-07 57.4 99 42.4
QL08p015136 Quercus lobata HOM05D004816 ORTHO05D000106 8.1e-07 57.4 99 42.4
SHI01003 Sapria himalayana HOM05D002876 ORTHO05D003118 8.1e-07 57.4 51 62.7
SHI22888 Sapria himalayana HOM05D002876 ORTHO05D007253 8.1e-07 57.4 82 42.7
AL3G42490 Arabidopsis lyrata HOM05D000176 ORTHO05D000106 1.1e-06 57.0 89 36.0
MSTRG.10797 Avicennia marina HOM05D000176 ORTHO05D000106 1.1e-06 57.0 89 37.1
Lalb_Chr01g0015401 Lupinus albus HOM05D000176 ORTHO05D000106 1.1e-06 57.0 92 30.4
SHI10873 Sapria himalayana HOM05D002876 ORTHO05D000106 1.1e-06 57.0 93 46.2
Dinv18200 Davidia involucrata HOM05D000176 ORTHO05D000106 1.4e-06 56.6 89 36.0
Nitab4.5_0000476g0120 Nicotiana tabacum HOM05D000176 ORTHO05D000106 1.4e-06 56.6 89 34.8
QL05p010466 Quercus lobata HOM05D000176 ORTHO05D000106 1.4e-06 56.6 89 38.2
Ca_07377_v3 Cicer arietinum L. HOM05D000176 ORTHO05D012663 1.8e-06 56.2 91 35.2
FvH4_6g33711 Fragaria vesca HOM05D000176 ORTHO05D000106 1.8e-06 56.2 89 36.0
QL03p000009 Quercus lobata HOM05D000176 ORTHO05D000106 1.8e-06 56.2 99 42.4
QL11p007847 Quercus lobata HOM05D002083 ORTHO05D000332 1.8e-06 56.2 99 42.4
SHI16126 Sapria himalayana HOM05D002876 ORTHO05D007253 1.8e-06 56.2 46 63.0
SHI34865 Sapria himalayana HOM05D002876 ORTHO05D000106 1.8e-06 56.2 35 74.3
SHI37420 Sapria himalayana HOM05D002876 ORTHO05D007253 1.8e-06 56.2 34 76.5
SHI48820 Sapria himalayana HOM05D002876 ORTHO05D000106 1.8e-06 56.2 65 44.6
Actinidia11188 Actinidia chinensis HOM05D000176 ORTHO05D000106 2.4e-06 55.8 89 36.0
CSS0028049 Camellia sinensis var. sinensis HOM05D001875 ORTHO05D000106 2.4e-06 55.8 89 37.1
CSS0045164 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 2.4e-06 55.8 89 37.1
Ca_11236_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 2.4e-06 55.8 91 37.4
Cc03_g15950 Coffea canephora HOM05D000176 ORTHO05D003511 2.4e-06 55.8 95 40.0
SHI48627 Sapria himalayana HOM05D002876 ORTHO05D000106 2.4e-06 55.8 38 71.1
SHI49225 Sapria himalayana HOM05D002876 ORTHO05D000106 2.4e-06 55.8 34 76.5
SHI52801 Sapria himalayana HOM05D002876 ORTHO05D000106 2.4e-06 55.8 82 45.1
SHI53048 Sapria himalayana HOM05D002876 ORTHO05D000106 2.4e-06 55.8 41 61.0
ClCG01G008600 Citrullus lanatus HOM05D000176 ORTHO05D000106 3.1e-06 55.5 91 39.6
Duzib211G0089 Durio zibethinus HOM05D000176 ORTHO05D000106 3.1e-06 55.5 89 36.0
Lj3C925T6 Lonicera japonica HOM05D000176 ORTHO05D000106 3.1e-06 55.5 89 34.8
MD17G1142300 Malus domestica HOM05D000176 ORTHO05D000106 3.1e-06 55.5 89 37.1
Peaxi162Scf00384g01218 Petunia axillaris HOM05D000176 ORTHO05D000106 3.1e-06 55.5 89 34.8
Prupe.3G047800 Prunus persica HOM05D000176 ORTHO05D000106 3.1e-06 55.5 89 38.2
QL02p071405 Quercus lobata HOM05D000176 ORTHO05D000106 3.1e-06 55.5 98 37.8
QL09p020558 Quercus lobata HOM05D000176 ORTHO05D000106 3.1e-06 55.5 98 37.8
QL09p030709 Quercus lobata HOM05D000176 ORTHO05D000106 3.1e-06 55.5 99 41.4
QL12p034017 Quercus lobata HOM05D000176 ORTHO05D000106 3.1e-06 55.5 98 37.8
QL93p0178_0007 Quercus lobata HOM05D000176 ORTHO05D000106 3.1e-06 55.5 99 41.4
SHI08076 Sapria himalayana HOM05D002876 ORTHO05D000106 3.1e-06 55.5 88 40.9
AT2G04865 Arabidopsis thaliana HOM05D000176 ORTHO05D000106 4.0e-06 55.1 89 36.0
Cc03_g14530 Coffea canephora HOM05D000176 ORTHO05D000106 4.0e-06 55.1 89 36.0
Duzib138G0102 Durio zibethinus HOM05D000176 ORTHO05D000106 4.0e-06 55.1 89 36.0
QL01p018788 Quercus lobata HOM05D000176 ORTHO05D000106 4.0e-06 55.1 96 37.5
QL01p023632 Quercus lobata HOM05D000176 ORTHO05D000106 4.0e-06 55.1 96 38.5
QL05p061244 Quercus lobata HOM05D000176 ORTHO05D000106 4.0e-06 55.1 99 41.4
QL10p058474 Quercus lobata HOM05D000176 ORTHO05D000106 4.0e-06 55.1 99 41.4
RcHm_v2.0_Chr2g0150841 Rosa chinensis HOM05D000176 ORTHO05D000106 4.0e-06 55.1 89 34.8
GSVIVG01006780001 Vitis vinifera HOM05D000176 ORTHO05D000106 4.0e-06 55.1 89 34.8
Ca_23329_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 5.3e-06 54.7 89 37.1
Psat4g187840 Pisum sativum HOM05D000176 ORTHO05D000106 5.3e-06 54.7 89 38.2
RhsimUnG0097200 Rhododendron simsii HOM05D010733 ORTHO05D000106 5.3e-06 54.7 98 36.7
SHI49521 Sapria himalayana HOM05D002876 ORTHO05D000106 5.3e-06 54.7 34 73.5
THA.LOC104808853 Tarenaya hassleriana HOM05D000176 ORTHO05D000106 5.3e-06 54.7 89 32.6
Ca_14624_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 6.9e-06 54.3 89 34.8
Eucgr.A01958 Eucalyptus grandis HOM05D000176 ORTHO05D000106 6.9e-06 54.3 89 36.0
FvH4_6g37771 Fragaria vesca HOM05D000176 ORTHO05D000106 6.9e-06 54.3 89 34.8
Oeu063771.2 Olea europaea HOM05D000176 ORTHO05D000106 6.9e-06 54.3 89 34.8
QL08p015067 Quercus lobata HOM05D004816 ORTHO05D000106 6.9e-06 54.3 99 41.4
RhsimUnG0202400 Rhododendron simsii HOM05D000176 ORTHO05D000106 6.9e-06 54.3 98 35.7
Sp3g23470 Schrenkiella parvula HOM05D000176 ORTHO05D000106 6.9e-06 54.3 89 36.0
Ca_12801_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 9.0e-06 53.9 91 36.3
MD09G1191600 Malus domestica HOM05D000176 ORTHO05D000106 9.0e-06 53.9 89 37.1
QL05p044352 Quercus lobata HOM05D000176 ORTHO05D000106 9.0e-06 53.9 102 36.3
RcHm_v2.0_Chr2g0143601 Rosa chinensis HOM05D000176 ORTHO05D000106 9.0e-06 53.9 89 34.8


User provided reference genes

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