Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI04874 Sapria himalayana HOM05D000107 ORTHO05D000062 4.6e-126 454.5 223 100.0
ECA246G4894 Erigeron canadensis HOM05D000107 ORTHO05D000062 3.3e-23 112.8 124 43.5
Manes.04G058760 Manihot esculenta HOM05D000107 ORTHO05D000062 2.4e-21 106.7 131 42.0
Manes.16G074801 Manihot esculenta HOM05D000107 ORTHO05D000062 2.4e-21 106.7 131 42.0
Manes.10G068101 Manihot esculenta HOM05D000107 ORTHO05D000062 6.9e-21 105.1 162 39.5
Manes.15G191830 Manihot esculenta HOM05D000107 ORTHO05D000062 6.9e-21 105.1 131 42.0
SHI22906 Sapria himalayana HOM05D000107 ORTHO05D000062 3.4e-20 102.8 166 34.3
SHI42354 Sapria himalayana HOM05D000107 ORTHO05D000062 3.4e-20 102.8 127 44.1
SHI07609 Sapria himalayana HOM05D000107 ORTHO05D000062 5.8e-20 102.1 122 45.1
SHI36114 Sapria himalayana HOM05D000107 ORTHO05D000062 7.6e-20 101.7 127 44.1
SHI37531 Sapria himalayana HOM05D000107 ORTHO05D000062 7.6e-20 101.7 127 44.1
CAN.G338.14 Capsicum annuum HOM05D015443 ORTHO05D000062 1.3e-19 100.9 127 44.9
SHI49792 Sapria himalayana HOM05D000107 ORTHO05D000062 1.3e-19 100.9 122 45.1
SHI45688 Sapria himalayana HOM05D000107 ORTHO05D000062 4.9e-19 99.0 120 45.8
SHI19809 Sapria himalayana HOM05D000107 ORTHO05D000062 8.4e-19 98.2 126 44.4
Manes.17G119950 Manihot esculenta HOM05D000107 ORTHO05D000062 1.4e-18 97.4 133 39.8
TWI81G0027 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 1.9e-18 97.1 141 38.3
TPR.G39680 Trifolium pratense HOM05D000107 ORTHO05D000062 2.4e-18 96.7 130 39.2
SHI51771 Sapria himalayana HOM05D000107 ORTHO05D000062 4.2e-18 95.9 132 40.2
SHI13501 Sapria himalayana HOM05D000107 ORTHO05D000062 7.1e-18 95.1 128 41.4
SHI17352 Sapria himalayana HOM05D000107 ORTHO05D000062 7.1e-18 95.1 90 48.9
TPR.G12582 Trifolium pratense HOM05D000107 ORTHO05D000062 1.6e-17 94.0 130 36.9
SHI41918 Sapria himalayana HOM05D000107 ORTHO05D000062 2.1e-17 93.6 132 38.6
SHI34320 Sapria himalayana HOM05D000107 ORTHO05D000062 4.6e-17 92.4 98 51.0
Manes.13G071916 Manihot esculenta HOM05D000107 ORTHO05D009534 7.9e-17 91.7 146 37.0
SHI38043 Sapria himalayana HOM05D000107 ORTHO05D000062 1.8e-16 90.5 111 44.1
TWI53G0600 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 1.8e-16 90.5 136 36.8
SHI04875 Sapria himalayana HOM05D000107 ORTHO05D000062 3.0e-16 89.7 91 52.7
SHI36256 Sapria himalayana HOM05D000107 ORTHO05D000062 3.0e-16 89.7 85 48.2
SHI44951 Sapria himalayana HOM05D000107 ORTHO05D000062 6.7e-16 88.6 116 41.4
TPR.G11453 Trifolium pratense HOM05D000107 ORTHO05D000062 8.7e-16 88.2 122 36.9
TWI32G1089 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 8.7e-16 88.2 127 37.8
TWI73G0119 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 8.7e-16 88.2 129 36.4
SHI35609 Sapria himalayana HOM05D000107 ORTHO05D000062 2.5e-15 86.7 95 43.2
TPR.G38773 Trifolium pratense HOM05D000107 ORTHO05D000062 4.3e-15 85.9 130 34.6
TWI38G0895 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 4.3e-15 85.9 127 37.0
Ah.02g121890 Amaranthus hybridus HOM05D000107 ORTHO05D000062 7.4e-15 85.1 125 36.8
TPR.G36007 Trifolium pratense HOM05D000107 ORTHO05D000062 7.4e-15 85.1 105 34.3
TWI60G0864 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 7.4e-15 85.1 129 35.7
SHI06290 Sapria himalayana HOM05D000648 ORTHO05D000062 1.3e-14 84.3 160 34.4
SHI37597 Sapria himalayana HOM05D000107 ORTHO05D000062 1.6e-14 84.0 121 36.4
TWI56G1165 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 1.6e-14 84.0 136 33.1
Sopen11g015700 Solanum pennellii HOM05D000004 ORTHO05D000002 2.8e-14 83.2 131 39.7
SHI41193 Sapria himalayana HOM05D000107 ORTHO05D000062 4.8e-14 82.4 171 35.7
Ah.14g081230 Amaranthus hybridus HOM05D000107 ORTHO05D000062 8.1e-14 81.6 163 32.5
Ah.14g081250 Amaranthus hybridus HOM05D000107 ORTHO05D000062 1.1e-13 81.3 163 32.5
TWI81G0480 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 1.4e-13 80.9 122 36.1
SHI43950 Sapria himalayana HOM05D000107 ORTHO05D000062 2.4e-13 80.1 75 52.0
TWI18G0474 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 1.5e-12 77.4 129 33.3
SHI31249 Sapria himalayana HOM05D007985 ORTHO05D000062 2.6e-12 76.6 162 30.9
Ca_13708_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000110 3.4e-12 76.3 175 29.1
ECA234G0534 Erigeron canadensis HOM05D000107 ORTHO05D000062 3.4e-12 76.3 131 35.1
SHI40666 Sapria himalayana HOM05D000648 ORTHO05D009534 1.7e-11 73.9 152 35.5
ECA247G3969 Erigeron canadensis HOM05D000107 ORTHO05D000062 2.2e-11 73.6 169 30.8
SHI32940 Sapria himalayana HOM05D000648 ORTHO05D009534 2.9e-11 73.2 178 28.1
ECA234G1982 Erigeron canadensis HOM05D000107 ORTHO05D000062 3.8e-11 72.8 149 32.2
Ca_12327_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 4.9e-11 72.4 129 33.3
SHI31941 Sapria himalayana HOM05D000107 ORTHO05D000062 1.4e-10 70.9 122 39.3
BcaB02g11280 Brassica carinata HOM05D008266 ORTHO05D000062 1.9e-10 70.5 113 34.5
ECA247G2380 Erigeron canadensis HOM05D000107 ORTHO05D000062 1.9e-10 70.5 149 31.5
SHI29811 Sapria himalayana HOM05D000107 ORTHO05D000062 1.9e-10 70.5 123 34.1
SHI22501 Sapria himalayana HOM05D000107 ORTHO05D000062 2.5e-10 70.1 105 37.1
Ca_18697_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000110 4.2e-10 69.3 108 36.1
Ca_27568_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000110 4.2e-10 69.3 108 37.0
BcaC03g18089 Brassica carinata HOM05D008266 ORTHO05D000062 7.1e-10 68.6 100 36.0
ECA236G4269 Erigeron canadensis HOM05D000107 ORTHO05D000062 9.3e-10 68.2 130 32.3
SHI47808 Sapria himalayana HOM05D036853 ORTHO05D000062 9.3e-10 68.2 92 40.2
BcaC06g34574 Brassica carinata HOM05D008266 ORTHO05D000062 1.6e-09 67.4 100 36.0
TPR.G20799 Trifolium pratense HOM05D000107 ORTHO05D000062 1.6e-09 67.4 121 37.2
SHI50626 Sapria himalayana HOM05D000648 ORTHO05D000062 2.7e-09 66.6 132 32.6
PGSC0003DMG400032278 Solanum tuberosum HOM05D000107 ORTHO05D017132 2.7e-09 66.6 95 40.0
BcaB01g02847 Brassica carinata HOM05D008266 ORTHO05D000062 6.0e-09 65.5 100 34.0
CAN.G80.40 Capsicum annuum HOM05D000107 ORTHO05D000062 6.0e-09 65.5 102 33.3
SHI03535 Sapria himalayana HOM05D007985 ORTHO05D000062 1.8e-08 63.9 83 38.6
ECA233G5623 Erigeron canadensis HOM05D000107 ORTHO05D000568 2.3e-08 63.5 122 36.1
COL.COLO4_28468 Corchorus olitorius HOM05D000107 ORTHO05D000062 3.0e-08 63.2 111 32.4
ECA234G1021 Erigeron canadensis HOM05D000107 ORTHO05D000062 3.0e-08 63.2 137 31.4
ECA238G4150 Erigeron canadensis HOM05D000107 ORTHO05D000062 3.9e-08 62.8 157 31.2
Manes.06G021367 Manihot esculenta HOM05D000107 ORTHO05D000062 3.9e-08 62.8 159 29.6
Manes.09G152601 Manihot esculenta HOM05D000107 ORTHO05D000062 3.9e-08 62.8 132 32.6
SHI33764 Sapria himalayana HOM05D000107 ORTHO05D000062 5.1e-08 62.4 88 40.9
BcaB03g16140 Brassica carinata HOM05D008266 ORTHO05D000062 6.7e-08 62.0 138 29.0
CAN.G628.16 Capsicum annuum HOM05D000292 ORTHO05D000172 8.7e-08 61.6 126 30.2
Manes.11G017526 Manihot esculenta HOM05D000107 ORTHO05D000062 8.7e-08 61.6 132 31.8
TPR.G10797 Trifolium pratense HOM05D000107 ORTHO05D000062 1.1e-07 61.2 104 33.7
BcaB04g17841 Brassica carinata HOM05D008266 ORTHO05D000062 1.5e-07 60.8 132 30.3
BcaC06g36414 Brassica carinata HOM05D008266 ORTHO05D000062 1.5e-07 60.8 138 27.5
SHI38044 Sapria himalayana HOM05D000107 ORTHO05D000062 1.5e-07 60.8 69 43.5
COL.COLO4_28982 Corchorus olitorius HOM05D009620 ORTHO05D013057 1.9e-07 60.5 147 25.9
ECA248G3962 Erigeron canadensis HOM05D000006 ORTHO05D000062 2.5e-07 60.1 93 34.4
SHI49647 Sapria himalayana HOM05D007985 ORTHO05D000062 4.3e-07 59.3 155 25.8
SHI32944 Sapria himalayana HOM05D000107 ORTHO05D000062 5.7e-07 58.9 107 33.6
BcaB02g11130 Brassica carinata HOM05D008266 ORTHO05D000062 7.4e-07 58.5 128 28.9
Ca_19138_v3 Cicer arietinum L. HOM05D008273 ORTHO05D000110 7.4e-07 58.5 104 33.7
SHI46220 Sapria himalayana HOM05D000648 ORTHO05D009534 9.6e-07 58.2 70 42.9
Solyc10g049777.1 Solanum lycopersicum HOM05D010076 ORTHO05D012500 9.6e-07 58.2 73 39.7
COL.COLO4_08610 Corchorus olitorius HOM05D000107 ORTHO05D000062 1.3e-06 57.8 118 33.1
SHI53985 Sapria himalayana HOM05D036853 ORTHO05D000062 1.6e-06 57.4 62 46.8
PGSC0003DMG400014039 Solanum tuberosum HOM05D010076 ORTHO05D012500 1.6e-06 57.4 131 32.1
Ca_02478_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000110 2.1e-06 57.0 104 32.7
SHI33135 Sapria himalayana HOM05D000648 ORTHO05D009534 2.1e-06 57.0 78 42.3
SHI36566 Sapria himalayana HOM05D000648 ORTHO05D000062 2.1e-06 57.0 70 42.9
COL.COLO4_33324 Corchorus olitorius HOM05D000107 ORTHO05D000062 2.8e-06 56.6 141 25.5
SHI32907 Sapria himalayana HOM05D007985 ORTHO05D000062 2.8e-06 56.6 78 38.5
SHI50389 Sapria himalayana HOM05D000648 ORTHO05D009534 4.8e-06 55.8 117 34.2
TWI59G1045 Tripterygium wilfordii HOM05D008266 ORTHO05D000062 4.8e-06 55.8 69 43.5
Lsat_1_v5_gn_1_25621 Lactuca sativa HOM05D008975 ORTHO05D010134 6.3e-06 55.5 94 31.9
TPR.G29545 Trifolium pratense HOM05D000107 ORTHO05D000062 8.2e-06 55.1 87 33.3


User provided reference genes

Program Settings