Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI04695 Sapria himalayana HOM05D000023 ORTHO05D000014 1.2e-129 466.5 225 100.0
SHI06024 Sapria himalayana HOM05D000023 ORTHO05D000014 3.0e-16 89.7 50 88.0
SHI13402 Sapria himalayana HOM05D004297 ORTHO05D005213 3.0e-16 89.7 50 88.0
SHI14569 Sapria himalayana HOM05D000023 ORTHO05D000014 3.0e-16 89.7 50 88.0
SHI14718 Sapria himalayana HOM05D000023 ORTHO05D000014 3.0e-16 89.7 50 88.0
SHI17120 Sapria himalayana HOM05D000023 ORTHO05D000014 3.0e-16 89.7 50 88.0
SHI21487 Sapria himalayana HOM05D000023 ORTHO05D000014 3.0e-16 89.7 50 88.0
SHI26236 Sapria himalayana HOM05D000023 ORTHO05D000014 3.0e-16 89.7 50 88.0
SHI07290 Sapria himalayana HOM05D000023 ORTHO05D000014 3.9e-16 89.4 50 86.0
SHI12783 Sapria himalayana HOM05D000023 ORTHO05D000014 6.7e-16 88.6 50 86.0
SHI49901 Sapria himalayana HOM05D000023 ORTHO05D000014 1.5e-15 87.4 50 86.0
SHI28166 Sapria himalayana HOM05D000023 ORTHO05D000014 2.6e-15 86.7 50 84.0
SHI32734 Sapria himalayana HOM05D000023 ORTHO05D000014 2.6e-15 86.7 133 45.9
SHI08605 Sapria himalayana HOM05D000105 ORTHO05D000014 5.7e-15 85.5 50 84.0
SHI27557 Sapria himalayana HOM05D000023 ORTHO05D000014 7.4e-15 85.1 50 86.0
SHI10685 Sapria himalayana HOM05D000023 ORTHO05D000014 2.8e-14 83.2 47 89.4
SHI05427 Sapria himalayana HOM05D004755 ORTHO05D006137 3.1e-13 79.7 47 83.0
SHI29372 Sapria himalayana HOM05D000023 ORTHO05D000014 2.6e-12 76.6 47 83.0
Atru.chr6.596 Acer truncatum HOM05D000023 ORTHO05D000014 3.5e-12 76.3 50 72.0
SHI08627 Sapria himalayana HOM05D000023 ORTHO05D000014 5.9e-12 75.5 71 62.0
Atru.chr13.2560 Acer truncatum HOM05D000023 ORTHO05D000014 1.3e-11 74.3 50 70.0
SHI09321 Sapria himalayana HOM05D000023 ORTHO05D000014 1.3e-11 74.3 113 45.1
MD17G1176800 Malus domestica HOM05D000023 ORTHO05D000014 5.0e-11 72.4 50 64.0
SHI10518 Sapria himalayana HOM05D000023 ORTHO05D000014 5.0e-11 72.4 44 79.5
Atru.chr7.421 Acer truncatum HOM05D000023 ORTHO05D000014 6.5e-11 72.0 50 70.0
Gorai.011G116500 Gossypium raimondii HOM05D000023 ORTHO05D000014 1.5e-10 70.9 48 70.8
Atru.chr13.2538 Acer truncatum HOM05D000023 ORTHO05D000014 3.2e-10 69.7 48 66.7
TWI18G0892 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 5.5e-10 68.9 49 67.3
TWI63G0054 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 5.5e-10 68.9 49 67.3
RcHm_v2.0_Chr2g0102701 Rosa chinensis HOM05D000023 ORTHO05D000014 7.2e-10 68.6 49 63.3
SHI17476 Sapria himalayana HOM05D000023 ORTHO05D000014 7.2e-10 68.6 37 89.2
Oeu032447.1 Olea europaea HOM05D000023 ORTHO05D000014 9.4e-10 68.2 50 66.0
RcHm_v2.0_Chr6g0295001 Rosa chinensis HOM05D000023 ORTHO05D000014 1.2e-09 67.8 48 64.6
RcHm_v2.0_Chr6g0278171 Rosa chinensis HOM05D000023 ORTHO05D000014 1.6e-09 67.4 49 61.2
Dinv11853 Davidia involucrata HOM05D000023 ORTHO05D000014 3.6e-09 66.2 50 58.0
Oeu061850.1 Olea europaea HOM05D000023 ORTHO05D000014 3.6e-09 66.2 50 64.0
Atru.chr9.1059 Acer truncatum HOM05D000023 ORTHO05D000014 8.0e-09 65.1 50 62.0
RcHm_v2.0_Chr7g0205361 Rosa chinensis HOM05D000023 ORTHO05D000014 8.0e-09 65.1 49 59.2
FvH4_5g06632 Fragaria vesca HOM05D000023 ORTHO05D000014 1.4e-08 64.3 49 57.1
Lj5g0002668 Lotus japonicus HOM05D000023 ORTHO05D000014 1.8e-08 63.9 48 62.5
Atru.chr5.1256 Acer truncatum HOM05D000023 ORTHO05D000014 2.3e-08 63.5 50 60.0
SHI28312 Sapria himalayana HOM05D000023 ORTHO05D000014 2.3e-08 63.5 47 70.2
TWI74G0862 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 2.3e-08 63.5 49 61.2
BcaC03g13506 Brassica carinata HOM05D000023 ORTHO05D000014 3.0e-08 63.2 48 64.6
AUR62006498 Chenopodium quinoa HOM05D000023 ORTHO05D000014 3.0e-08 63.2 78 44.9
COL.COLO4_21793 Corchorus olitorius HOM05D000023 ORTHO05D000014 3.0e-08 63.2 48 58.3
arahy.Tifrunner.gnm1.ann1.59J3RY Arachis hypogaea HOM05D000023 ORTHO05D000014 4.0e-08 62.8 48 60.4
Glyma.18G197350 Glycine max HOM05D000023 ORTHO05D000014 4.0e-08 62.8 48 60.4
BcaC09g48560 Brassica carinata HOM05D000023 ORTHO05D000014 5.2e-08 62.4 48 64.6
Os02g0513700 Oryza sativa ssp. japonica HOM05D000023 ORTHO05D000014 5.2e-08 62.4 48 62.5
SHI09712 Sapria himalayana HOM05D000023 ORTHO05D000014 5.2e-08 62.4 36 86.1
arahy.Tifrunner.gnm1.ann1.B0DQ39 Arachis hypogaea HOM05D000023 ORTHO05D000014 6.7e-08 62.0 48 60.4
arahy.Tifrunner.gnm1.ann1.GA19A6 Arachis hypogaea HOM05D000023 ORTHO05D000014 6.7e-08 62.0 48 60.4
arahy.Tifrunner.gnm1.ann1.LZ7HA6 Arachis hypogaea HOM05D000023 ORTHO05D000014 6.7e-08 62.0 48 60.4
ECA233G1350 Erigeron canadensis HOM05D000023 ORTHO05D000001 6.7e-08 62.0 48 62.5
Sp7g14400 Schrenkiella parvula HOM05D000023 ORTHO05D000014 6.7e-08 62.0 48 62.5
C05p35430 Brassica napus HOM05D000023 ORTHO05D000014 8.8e-08 61.6 48 62.5
Glyma.03G100300 Glycine max HOM05D000023 ORTHO05D000014 2.0e-07 60.5 48 60.4
HanXRQChr06g0171651 Helianthus annuus HOM05D000023 ORTHO05D000014 2.0e-07 60.5 48 58.3
arahy.Tifrunner.gnm1.ann1.F23DGP Arachis hypogaea HOM05D000023 ORTHO05D000014 2.6e-07 60.1 48 60.4
arahy.Tifrunner.gnm1.ann1.KV4G29 Arachis hypogaea HOM05D000023 ORTHO05D000014 2.6e-07 60.1 48 60.4
arahy.Tifrunner.gnm1.ann1.UW16ZC Arachis hypogaea HOM05D000023 ORTHO05D000014 2.6e-07 60.1 48 60.4
COL.COLO4_20882 Corchorus olitorius HOM05D000023 ORTHO05D000014 2.6e-07 60.1 48 56.2
PSO017G6237 Papaver somniferum HOM05D000023 ORTHO05D000014 2.6e-07 60.1 48 56.2
PSO478G0613 Papaver somniferum HOM05D000023 ORTHO05D000014 2.6e-07 60.1 48 56.2
TWI77G0487 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 2.6e-07 60.1 50 48.0
arahy.Tifrunner.gnm1.ann1.0KMR65 Arachis hypogaea HOM05D000023 ORTHO05D000014 3.3e-07 59.7 48 58.3
arahy.Tifrunner.gnm1.ann1.CHR5JU Arachis hypogaea HOM05D000023 ORTHO05D000014 3.3e-07 59.7 51 56.9
arahy.Tifrunner.gnm1.ann1.UX9V95 Arachis hypogaea HOM05D000023 ORTHO05D000014 3.3e-07 59.7 48 60.4
ClCG04G001860 Citrullus lanatus HOM05D000004 ORTHO05D000002 3.3e-07 59.7 48 58.3
Os06g0658400 Oryza sativa ssp. japonica HOM05D000023 ORTHO05D000014 3.3e-07 59.7 48 60.4
Sp7g11960 Schrenkiella parvula HOM05D000023 ORTHO05D000014 3.3e-07 59.7 51 62.7
arahy.Tifrunner.gnm1.ann1.RRIW7B Arachis hypogaea HOM05D000023 ORTHO05D000014 4.4e-07 59.3 48 58.3
AUR62002256 Chenopodium quinoa HOM05D000074 ORTHO05D002365 4.4e-07 59.3 50 54.0
ECA233G4406 Erigeron canadensis HOM05D000131 ORTHO05D000014 4.4e-07 59.3 48 58.3
QL02p012945 Quercus lobata HOM05D000023 ORTHO05D000014 4.4e-07 59.3 48 56.2
QL03p021217 Quercus lobata HOM05D000023 ORTHO05D000014 4.4e-07 59.3 48 56.2
QL07p028333 Quercus lobata HOM05D000023 ORTHO05D000014 4.4e-07 59.3 48 56.2
QL10p037399 Quercus lobata HOM05D000023 ORTHO05D000014 4.4e-07 59.3 48 56.2
TWI74G0427 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 4.4e-07 59.3 48 56.2
arahy.Tifrunner.gnm1.ann1.PERH2Y Arachis hypogaea HOM05D000023 ORTHO05D000014 5.7e-07 58.9 48 58.3
FvH4_2g16371 Fragaria vesca HOM05D000023 ORTHO05D000014 5.7e-07 58.9 50 48.0
PSO017G0124 Papaver somniferum HOM05D000023 ORTHO05D000014 5.7e-07 58.9 48 54.2
PSO017G0971 Papaver somniferum HOM05D000023 ORTHO05D000014 5.7e-07 58.9 48 54.2
PSO017G1031 Papaver somniferum HOM05D000023 ORTHO05D000014 5.7e-07 58.9 48 54.2
PSO017G4761 Papaver somniferum HOM05D000023 ORTHO05D000014 5.7e-07 58.9 48 54.2
PSO063G2876 Papaver somniferum HOM05D000023 ORTHO05D000014 5.7e-07 58.9 48 54.2
PSO063G3226 Papaver somniferum HOM05D000023 ORTHO05D000014 5.7e-07 58.9 48 54.2
PSO063G7474 Papaver somniferum HOM05D000023 ORTHO05D000014 5.7e-07 58.9 48 54.2
PSO104G0268 Papaver somniferum HOM05D000023 ORTHO05D000014 5.7e-07 58.9 48 54.2
PSO170G3895 Papaver somniferum HOM05D000023 ORTHO05D000014 5.7e-07 58.9 48 54.2
PSO210G0286 Papaver somniferum HOM05D000023 ORTHO05D000014 5.7e-07 58.9 48 54.2
PSO339G3850 Papaver somniferum HOM05D000023 ORTHO05D000014 5.7e-07 58.9 48 54.2
PSO478G1709 Papaver somniferum HOM05D000023 ORTHO05D000014 5.7e-07 58.9 48 54.2
PSO478G3870 Papaver somniferum HOM05D000023 ORTHO05D000014 5.7e-07 58.9 48 54.2
PSO585G0012 Papaver somniferum HOM05D000023 ORTHO05D000014 5.7e-07 58.9 48 54.2
PSO675G2708 Papaver somniferum HOM05D000023 ORTHO05D000014 5.7e-07 58.9 48 54.2
PSO675G6543 Papaver somniferum HOM05D000023 ORTHO05D000014 5.7e-07 58.9 48 54.2
PSO675G8000 Papaver somniferum HOM05D000023 ORTHO05D000014 5.7e-07 58.9 48 54.2
PSO782G3350 Papaver somniferum HOM05D000023 ORTHO05D000014 5.7e-07 58.9 48 54.2
QL04p036651 Quercus lobata HOM05D000023 ORTHO05D000014 5.7e-07 58.9 48 56.2
arahy.Tifrunner.gnm1.ann1.HID98C Arachis hypogaea HOM05D000023 ORTHO05D000014 7.5e-07 58.5 48 58.3
arahy.Tifrunner.gnm1.ann1.AS3ZE6 Arachis hypogaea HOM05D000023 ORTHO05D000014 9.7e-07 58.2 113 37.2
arahy.Tifrunner.gnm1.ann1.ZJLE4H Arachis hypogaea HOM05D000023 ORTHO05D000014 9.7e-07 58.2 46 58.7
PSO063G1377 Papaver somniferum HOM05D000023 ORTHO05D000014 9.7e-07 58.2 48 52.1
QL06p009534 Quercus lobata HOM05D000132 ORTHO05D000014 9.7e-07 58.2 48 54.2
PSO063G4346 Papaver somniferum HOM05D000023 ORTHO05D000014 1.3e-06 57.8 48 52.1
PSO700G0308 Papaver somniferum HOM05D000023 ORTHO05D000014 1.3e-06 57.8 48 56.2
TPR.G20605 Trifolium pratense HOM05D000023 ORTHO05D000014 1.3e-06 57.8 48 54.2
TWI74G0763 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 1.3e-06 57.8 48 54.2
arahy.Tifrunner.gnm1.ann1.47Q9LE Arachis hypogaea HOM05D000023 ORTHO05D000014 1.7e-06 57.4 47 59.6
C03p23960 Brassica napus HOM05D000023 ORTHO05D000014 1.7e-06 57.4 46 58.7
arahy.Tifrunner.gnm1.ann1.V52GIS Arachis hypogaea HOM05D000023 ORTHO05D000014 2.2e-06 57.0 48 56.2
AUR62005034 Chenopodium quinoa HOM05D000023 ORTHO05D000014 2.2e-06 57.0 50 52.0
AUR62010486 Chenopodium quinoa HOM05D000023 ORTHO05D000014 2.2e-06 57.0 50 52.0
AUR62010568 Chenopodium quinoa HOM05D000023 ORTHO05D000014 2.2e-06 57.0 50 52.0
AUR62016849 Chenopodium quinoa HOM05D000023 ORTHO05D000014 2.2e-06 57.0 50 52.0
AUR62017341 Chenopodium quinoa HOM05D000023 ORTHO05D000014 2.2e-06 57.0 50 52.0
AUR62019364 Chenopodium quinoa HOM05D000023 ORTHO05D000014 2.2e-06 57.0 50 52.0
AUR62022259 Chenopodium quinoa HOM05D000023 ORTHO05D000014 2.2e-06 57.0 50 52.0
AUR62024763 Chenopodium quinoa HOM05D000023 ORTHO05D000014 2.2e-06 57.0 50 52.0
AUR62030082 Chenopodium quinoa HOM05D000023 ORTHO05D000014 2.2e-06 57.0 50 52.0
AUR62032748 Chenopodium quinoa HOM05D000023 ORTHO05D000014 2.2e-06 57.0 50 52.0
AUR62033875 Chenopodium quinoa HOM05D000023 ORTHO05D000014 2.2e-06 57.0 50 52.0
AUR62035427 Chenopodium quinoa HOM05D000023 ORTHO05D000014 2.2e-06 57.0 50 52.0
AUR62035857 Chenopodium quinoa HOM05D000023 ORTHO05D000014 2.2e-06 57.0 50 52.0
AUR62039095 Chenopodium quinoa HOM05D000023 ORTHO05D000014 2.2e-06 57.0 50 52.0
AUR62044734 Chenopodium quinoa HOM05D000023 ORTHO05D000014 2.2e-06 57.0 50 52.0
SHI36074 Sapria himalayana HOM05D000023 ORTHO05D000014 2.2e-06 57.0 32 84.4
TPR.G17787 Trifolium pratense HOM05D000023 ORTHO05D000014 2.2e-06 57.0 48 58.3
arahy.Tifrunner.gnm1.ann1.956LMD Arachis hypogaea HOM05D000023 ORTHO05D000014 2.8e-06 56.6 48 56.2
PSO170G1134 Papaver somniferum HOM05D000023 ORTHO05D000014 2.8e-06 56.6 48 52.1
SHI16741 Sapria himalayana HOM05D000023 ORTHO05D000014 2.8e-06 56.6 37 73.0
Sopen09g020870 Solanum pennellii HOM05D000002 ORTHO05D000001 2.8e-06 56.6 67 38.8
TPR.G510 Trifolium pratense HOM05D000023 ORTHO05D000014 2.8e-06 56.6 48 58.3
AUR62034670 Chenopodium quinoa HOM05D000023 ORTHO05D000014 3.7e-06 56.2 50 52.0
FvH4_5g08812 Fragaria vesca HOM05D000023 ORTHO05D000014 3.7e-06 56.2 39 69.2
Lj2g0007711 Lotus japonicus HOM05D000023 ORTHO05D000014 3.7e-06 56.2 48 54.2
QL02p042311 Quercus lobata HOM05D000023 ORTHO05D000014 3.7e-06 56.2 48 54.2
QL10p011687 Quercus lobata HOM05D000023 ORTHO05D000014 3.7e-06 56.2 48 54.2
arahy.Tifrunner.gnm1.ann1.E5DIFE Arachis hypogaea HOM05D000023 ORTHO05D000014 4.8e-06 55.8 48 54.2
Sopen12g025090 Solanum pennellii HOM05D000002 ORTHO05D000001 4.8e-06 55.8 41 53.7
BolC3t14786H Brassica oleracea HOM05D000023 ORTHO05D000014 6.3e-06 55.5 45 57.8
PSO063G7620 Papaver somniferum HOM05D000023 ORTHO05D000014 6.3e-06 55.5 48 52.1
QL04p092962 Quercus lobata HOM05D000023 ORTHO05D000014 8.2e-06 55.1 48 52.1


User provided reference genes

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