Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI04677 Sapria himalayana HOM05D005313 ORTHO05D006317 6.3e-103 377.5 194 100.0
Potri.008G128900 Populus trichocarpa HOM05D005313 ORTHO05D006317 5.5e-59 231.5 160 75.0
Rhsim02G0199800 Rhododendron simsii HOM05D005313 ORTHO05D006317 1.0e-57 227.3 160 72.5
Cc11_g08770 Coffea canephora HOM05D005313 ORTHO05D006317 2.3e-57 226.1 160 71.2
Dinv17424 Davidia involucrata HOM05D005313 ORTHO05D006317 2.3e-57 226.1 160 71.9
TWI31G1405 Tripterygium wilfordii HOM05D005313 ORTHO05D006317 4.0e-57 225.3 160 73.1
CSS0048776 Camellia sinensis var. sinensis HOM05D005313 ORTHO05D006317 1.2e-56 223.8 160 70.6
COL.COLO4_20475 Corchorus olitorius HOM05D005313 ORTHO05D006317 1.5e-56 223.4 186 64.0
Lj6A747T68 Lonicera japonica HOM05D005313 ORTHO05D006317 2.0e-56 223.0 154 73.4
Thecc.02G280500 Theobroma cacao HOM05D005313 ORTHO05D006317 2.0e-56 223.0 160 71.2
SalBow4G0219 Salvia bowleyana HOM05D005313 ORTHO05D006317 5.7e-56 221.5 160 71.9
SalBow4G0808 Salvia bowleyana HOM05D005313 ORTHO05D006317 5.7e-56 221.5 160 71.9
Lj2g0003652 Lotus japonicus HOM05D005313 ORTHO05D006317 7.5e-56 221.1 160 70.6
Manes.17G006600 Manihot esculenta HOM05D005313 ORTHO05D006317 7.5e-56 221.1 160 71.9
vmacro10642 Vaccinium macrocarpon HOM05D005313 ORTHO05D006317 9.8e-56 220.7 160 71.2
TAR623G0220 Trochodendron aralioides HOM05D005313 ORTHO05D006317 1.3e-55 220.3 160 69.4
PSO384G2037 Papaver somniferum HOM05D005313 ORTHO05D006317 2.2e-55 219.5 160 69.4
Gohir.A01G152800 Gossypium hirsutum HOM05D005313 ORTHO05D006317 2.8e-55 219.2 160 71.2
Gohir.D01G145600 Gossypium hirsutum HOM05D005313 ORTHO05D006317 2.8e-55 219.2 160 71.2
Nitab4.5_0000742g0010 Nicotiana tabacum HOM05D005313 ORTHO05D006317 2.8e-55 219.2 160 70.0
Gorai.002G179900 Gossypium raimondii HOM05D005313 ORTHO05D006317 3.7e-55 218.8 160 71.2
Prupe.1G323900 Prunus persica HOM05D005313 ORTHO05D006317 3.7e-55 218.8 160 70.6
Haze_11011 Corylus avellana HOM05D005313 ORTHO05D006317 6.3e-55 218.0 160 70.0
MD16G1029000 Malus domestica HOM05D005313 ORTHO05D006317 6.3e-55 218.0 160 70.6
QL01p001863 Quercus lobata HOM05D005313 ORTHO05D006317 6.3e-55 218.0 160 68.8
GSVIVG01011763001 Vitis vinifera HOM05D005313 ORTHO05D006317 6.3e-55 218.0 160 69.4
CAN.G1334.2 Capsicum annuum HOM05D005313 ORTHO05D006317 8.3e-55 217.6 160 70.0
Psat6g042560 Pisum sativum HOM05D005313 ORTHO05D006317 8.3e-55 217.6 160 69.4
Glyma.02G238100 Glycine max HOM05D005313 ORTHO05D006317 1.4e-54 216.9 160 68.8
Peaxi162Scf00159g00112 Petunia axillaris HOM05D005313 ORTHO05D006317 1.4e-54 216.9 160 70.0
Sabra08G0097700 Salix brachista HOM05D005313 ORTHO05D006317 1.4e-54 216.9 208 60.1
ECA246G2448 Erigeron canadensis HOM05D005313 ORTHO05D006317 1.8e-54 216.5 191 60.7
Sc14g0007170 Simmondsia chinensis HOM05D005313 ORTHO05D006317 1.8e-54 216.5 160 67.5
MSTRG.895 Avicennia marina HOM05D005313 ORTHO05D006317 2.4e-54 216.1 160 70.0
Lalb_Chr17g0338641 Lupinus albus HOM05D005313 ORTHO05D006317 2.4e-54 216.1 160 69.4
Medtr1g030750 Medicago truncatula HOM05D005313 ORTHO05D006317 2.4e-54 216.1 160 69.4
Peaxi162Scf00450g00614 Petunia axillaris HOM05D005313 ORTHO05D006317 2.4e-54 216.1 160 70.0
RcHm_v2.0_Chr4g0441121 Rosa chinensis HOM05D005313 ORTHO05D006317 2.4e-54 216.1 160 69.4
Cfa008602 Carpinus fangiana HOM05D005313 ORTHO05D006317 3.1e-54 215.7 160 69.4
MELO3C018332.2 Cucumis melo HOM05D005313 ORTHO05D006317 3.1e-54 215.7 160 68.1
FvH4_4g32330 Fragaria vesca HOM05D005313 ORTHO05D006317 3.1e-54 215.7 160 70.6
FAN17G2517 Fragaria x ananassa HOM05D005313 ORTHO05D006317 3.1e-54 215.7 160 70.6
PGSC0003DMG400030501 Solanum tuberosum HOM05D005313 ORTHO05D006317 3.1e-54 215.7 160 69.4
Glyma.09G118600 Glycine max HOM05D005313 ORTHO05D006317 4.1e-54 215.3 160 68.1
Phvul.003G023500 Phaseolus vulgaris HOM05D005313 ORTHO05D006317 4.1e-54 215.3 160 68.8
FAN22G0311 Fragaria x ananassa HOM05D005313 ORTHO05D006317 5.4e-54 214.9 160 70.0
PSO339G3364 Papaver somniferum HOM05D005313 ORTHO05D006317 5.4e-54 214.9 191 59.7
Solyc05g008180.3 Solanum lycopersicum HOM05D005313 ORTHO05D006317 5.4e-54 214.9 160 69.4
Sopen05g004020 Solanum pennellii HOM05D005313 ORTHO05D006317 5.4e-54 214.9 160 69.4
AL5G10310 Arabidopsis lyrata HOM05D005313 ORTHO05D006317 7.0e-54 214.5 160 69.4
VMungo1215G0481 Vigna mungo HOM05D005313 ORTHO05D006317 7.0e-54 214.5 160 68.1
ATR0807G196 Amborella trichopoda HOM05D005313 ORTHO05D006317 9.2e-54 214.2 154 70.8
AT2G01350 Arabidopsis thaliana HOM05D005313 ORTHO05D006317 9.2e-54 214.2 160 68.8
CsaV3_5G013570 Cucumis sativus L. HOM05D005313 ORTHO05D006317 9.2e-54 214.2 160 68.1
THA.LOC104805057 Tarenaya hassleriana HOM05D005313 ORTHO05D006317 9.2e-54 214.2 160 70.0
HanXRQChr15g0488661 Helianthus annuus HOM05D005313 ORTHO05D006317 1.2e-53 213.8 160 68.1
Atru.chr9.122 Acer truncatum HOM05D005313 ORTHO05D006317 1.6e-53 213.4 160 67.5
Aa31LG2G8560 Aethionema arabicum HOM05D005313 ORTHO05D006317 1.6e-53 213.4 160 69.4
Carub.0005s0033 Capsella rubella HOM05D005313 ORTHO05D006317 2.0e-53 213.0 160 68.8
PGR119G0894 Punica granatum HOM05D005313 ORTHO05D006317 2.0e-53 213.0 186 61.3
Hund08629 Selenicereus undatus HOM05D005313 ORTHO05D006317 2.7e-53 212.6 160 65.6
CANSAT01G3269 Cannabis sativa HOM05D005313 ORTHO05D006317 4.5e-53 211.8 186 59.7
Nitab4.5_0004816g0010 Nicotiana tabacum HOM05D005313 ORTHO05D006317 7.7e-53 211.1 160 67.5
Sed0021241 Sechium edule HOM05D005313 ORTHO05D006317 7.7e-53 211.1 160 67.5
AUR62017725 Chenopodium quinoa HOM05D005313 ORTHO05D006317 1.7e-52 209.9 160 66.2
Dinv05167 Davidia involucrata HOM05D005313 ORTHO05D006317 1.7e-52 209.9 154 69.5
FAN07G2253 Fragaria x ananassa HOM05D005313 ORTHO05D006317 1.7e-52 209.9 160 68.8
CARHR143870 Cardamine hirsuta HOM05D005313 ORTHO05D006317 2.3e-52 209.5 160 67.5
Aqoxy1G00025 Aquilegia oxysepala HOM05D005313 ORTHO05D006317 3.8e-52 208.8 160 67.5
Oeu024584.1 Olea europaea HOM05D005313 ORTHO05D006317 3.8e-52 208.8 178 61.8
EL10Ac7g15995 Beta vulgaris HOM05D005313 ORTHO05D006317 5.0e-52 208.4 160 65.6
ClCG07G006260 Citrullus lanatus HOM05D005313 ORTHO05D006317 5.0e-52 208.4 154 68.2
Thhalv10000908m.g Eutrema salsugineum HOM05D005313 ORTHO05D006317 5.0e-52 208.4 160 66.9
BcaB07g30404 Brassica carinata HOM05D005313 ORTHO05D006317 6.6e-52 208.0 160 66.9
Eucgr.G02191 Eucalyptus grandis HOM05D005313 ORTHO05D006317 6.6e-52 208.0 186 61.3
Sp2g12800 Schrenkiella parvula HOM05D005313 ORTHO05D006317 2.5e-51 206.1 160 66.2
Ah.01g012630 Amaranthus hybridus HOM05D005313 ORTHO05D006317 4.3e-51 205.3 155 67.1
A02p31910 Brassica napus HOM05D005313 ORTHO05D006317 4.3e-51 205.3 160 66.2
BraA02t08201Z Brassica rapa HOM05D005313 ORTHO05D006317 4.3e-51 205.3 160 66.2
CDE05G1915 Ceratophyllum demersum HOM05D005313 ORTHO05D006317 4.3e-51 205.3 160 64.4
Ciclev10018157m.g Citrus clementina HOM05D005313 ORTHO05D006317 5.6e-51 204.9 151 70.2
Lsat_1_v5_gn_3_54641 Lactuca sativa HOM05D005313 ORTHO05D006317 9.5e-51 204.1 191 57.1
C02p49400 Brassica napus HOM05D005313 ORTHO05D006317 1.6e-50 203.4 160 65.6
BolC2t11026H Brassica oleracea HOM05D005313 ORTHO05D006317 1.6e-50 203.4 160 65.6
Ca_25713_v3 Cicer arietinum L. HOM05D005313 ORTHO05D006317 2.8e-50 202.6 194 56.7
HPP92_025383 Vanilla planifolia HOM05D005313 ORTHO05D006317 2.8e-50 202.6 160 63.1
BcaC03g17029 Brassica carinata HOM05D005313 ORTHO05D006317 4.7e-50 201.8 160 65.0
BcaC03g17031 Brassica carinata HOM05D005313 ORTHO05D006317 4.7e-50 201.8 160 65.0
Zm00001eb104420 Zea mays HOM05D005313 ORTHO05D006317 4.7e-50 201.8 186 57.5
SEGI_23840 Sequoiadendron giganteum HOM05D005313 ORTHO05D006317 1.0e-49 200.7 160 65.6
Os09g0553600 Oryza sativa ssp. japonica HOM05D005313 ORTHO05D006317 1.8e-49 199.9 160 63.1
AagrBONN_evm.TU.Sc2ySwM_117.3802 Anthoceros agrestis HOM05D005313 ORTHO05D006317 4.4e-48 195.3 160 63.8
Migut.L00987 Erythranthe guttata HOM05D005313 ORTHO05D006317 4.4e-48 195.3 143 70.6
AUR62032955 Chenopodium quinoa HOM05D005313 ORTHO05D006317 5.7e-48 194.9 182 58.8
Duzib248G1582 Durio zibethinus HOM05D005313 ORTHO05D006317 9.8e-48 194.1 170 60.0
Duzib248G1474 Durio zibethinus HOM05D005313 ORTHO05D006317 2.9e-47 192.6 145 69.0
Pp3c8_18030 Physcomitrium patens HOM05D005313 ORTHO05D006317 2.9e-47 192.6 160 61.2
CiPaw.06G012200 Carya illinoinensis HOM05D005313 ORTHO05D006317 8.3e-47 191.0 143 69.9
DCAR_023608 Daucus carota HOM05D005313 ORTHO05D006317 8.3e-47 191.0 144 65.3
Mapoly0011s0070 Marchantia polymorpha HOM05D005313 ORTHO05D006317 3.2e-46 189.1 160 60.0
FAN12G1743 Fragaria x ananassa HOM05D005313 ORTHO05D006317 4.1e-46 188.7 129 73.6
SGA_v2.0_scaffold50G18517 Striga asiatica HOM05D005313 ORTHO05D006317 1.2e-45 187.2 138 71.0
SMO164G0169 Selaginella moellendorffii HOM05D005313 ORTHO05D006317 2.0e-45 186.4 160 61.9
Zm00001eb320780 Zea mays HOM05D005313 ORTHO05D006317 4.3e-43 178.7 182 52.2
CBR_g30917 Chara braunii HOM05D005313 ORTHO05D006317 3.6e-42 175.6 161 60.2
MCO15G382 Micromonas commoda HOM05D005313 ORTHO05D006317 5.4e-38 161.8 164 56.7
Cpa.g.sc65.129 Carica papaya HOM05D005313 ORTHO05D006317 1.5e-35 153.7 191 49.7
unitig_0.g2330 Utricularia gibba HOM05D005313 ORTHO05D006317 1.5e-35 153.7 160 55.0
PRCOL_00006420 Prasinoderma coloniale HOM05D005313 ORTHO05D006317 2.1e-34 149.8 163 54.6
Nn2g15695 Nelumbo nucifera HOM05D005313 ORTHO05D006317 2.2e-31 139.8 154 53.2
Cre02.g141200 Chlamydomonas reinhardtii HOM05D005313 ORTHO05D006317 7.8e-29 131.3 191 45.0
COL.COLO4_10085 Corchorus olitorius HOM05D005313 ORTHO05D006317 2.6e-24 116.3 85 69.4
Ca_12605_v3 Cicer arietinum L. HOM05D005313 ORTHO05D006317 6.4e-23 111.7 85 68.2
CsaV3_UNG236450 Cucumis sativus L. HOM05D005313 ORTHO05D006317 1.1e-22 110.9 86 68.6
arahy.Tifrunner.gnm1.ann1.Y1EHRK Arachis hypogaea HOM05D005313 ORTHO05D006317 3.2e-22 109.4 97 59.8
arahy.Tifrunner.gnm1.ann1.G5QWBZ Arachis hypogaea HOM05D005313 ORTHO05D006317 2.7e-21 106.3 106 55.7
Actinidia26811 Actinidia chinensis HOM05D005313 ORTHO05D006317 3.5e-21 105.9 85 65.9
Glyma.07G165500 Glycine max HOM05D005313 ORTHO05D006317 4.6e-21 105.5 100 57.0
Potri.010G113500 Populus trichocarpa HOM05D005313 ORTHO05D006317 1.2e-18 97.4 81 63.0
Oeu045874.1 Olea europaea HOM05D005313 ORTHO05D006317 1.8e-17 93.6 76 60.5
CAN.G1020.2 Capsicum annuum HOM05D005313 ORTHO05D006317 2.2e-15 86.7 124 39.5
Sabra10G0083500 Salix brachista HOM05D005313 ORTHO05D006317 3.8e-15 85.9 124 44.4
CSS0042289 Camellia sinensis var. sinensis HOM05D005313 ORTHO05D006317 8.4e-15 84.7 76 59.2
CsaV3_UNG236470 Cucumis sativus L. HOM05D005313 ORTHO05D006317 9.3e-14 81.3 60 65.0
Ca_31307_v3 Cicer arietinum L. HOM05D005313 ORTHO05D006317 7.8e-13 78.2 137 38.0
Actinidia14964 Actinidia chinensis HOM05D005313 ORTHO05D006317 1.3e-12 77.4 92 46.7
TPR.G36891 Trifolium pratense HOM05D005313 ORTHO05D006317 2.1e-10 70.1 46 65.2
SHI16363 Sapria himalayana HOM05D000023 ORTHO05D000014 4.8e-10 68.9 52 65.4
A06p44480 Brassica napus HOM05D005313 ORTHO05D006317 1.4e-09 67.4 136 36.0
SHI15013 Sapria himalayana HOM05D000023 ORTHO05D000014 2.4e-09 66.6 37 83.8
SHI23852 Sapria himalayana HOM05D000023 ORTHO05D000014 6.9e-09 65.1 49 67.3
SHI23519 Sapria himalayana HOM05D000023 ORTHO05D000014 1.2e-08 64.3 37 78.4
SHI03370 Sapria himalayana HOM05D004002 ORTHO05D000023 4.5e-08 62.4 36 80.6
BcaC06g31315 Brassica carinata HOM05D005313 ORTHO05D006317 5.8e-08 62.0 50 54.0
SHI01910 Sapria himalayana HOM05D000023 ORTHO05D000014 5.8e-08 62.0 40 72.5
SHI08965 Sapria himalayana HOM05D000023 ORTHO05D000014 5.8e-08 62.0 48 58.3
SHI28524 Sapria himalayana HOM05D000023 ORTHO05D000014 5.8e-08 62.0 38 73.7
SHI42506 Sapria himalayana HOM05D000023 ORTHO05D000014 5.8e-08 62.0 36 77.8
SHI00523 Sapria himalayana HOM05D000023 ORTHO05D000014 7.6e-08 61.6 36 80.6
SHI03240 Sapria himalayana HOM05D000023 ORTHO05D000014 7.6e-08 61.6 36 80.6
SHI21817 Sapria himalayana HOM05D000023 ORTHO05D000014 7.6e-08 61.6 36 80.6
SHI49653 Sapria himalayana HOM05D000023 ORTHO05D000014 7.6e-08 61.6 49 59.2
SHI09417 Sapria himalayana HOM05D000023 ORTHO05D000014 9.9e-08 61.2 36 77.8
SHI11757 Sapria himalayana HOM05D000023 ORTHO05D000014 9.9e-08 61.2 36 80.6
SHI13681 Sapria himalayana HOM05D000023 ORTHO05D000014 9.9e-08 61.2 35 80.0
SHI28525 Sapria himalayana HOM05D000023 ORTHO05D000014 9.9e-08 61.2 36 77.8
SHI30094 Sapria himalayana HOM05D000023 ORTHO05D000014 9.9e-08 61.2 36 77.8
SHI14057 Sapria himalayana HOM05D000023 ORTHO05D000014 1.3e-07 60.8 36 80.6
SHI10981 Sapria himalayana HOM05D000023 ORTHO05D000014 1.7e-07 60.5 36 77.8
SHI26085 Sapria himalayana HOM05D000023 ORTHO05D000014 1.7e-07 60.5 36 77.8
SHI26741 Sapria himalayana HOM05D000023 ORTHO05D000014 1.7e-07 60.5 36 80.6
SHI04220 Sapria himalayana HOM05D000023 ORTHO05D000014 2.2e-07 60.1 36 77.8
SHI08624 Sapria himalayana HOM05D000023 ORTHO05D000014 2.2e-07 60.1 36 77.8
SHI12536 Sapria himalayana HOM05D000023 ORTHO05D000014 2.2e-07 60.1 36 77.8
SHI14664 Sapria himalayana HOM05D000023 ORTHO05D000014 2.2e-07 60.1 36 77.8
SHI10237 Sapria himalayana HOM05D000023 ORTHO05D000014 2.9e-07 59.7 35 77.1
SHI40523 Sapria himalayana HOM05D000023 ORTHO05D000014 2.9e-07 59.7 36 77.8
SHI23475 Sapria himalayana HOM05D000023 ORTHO05D000014 4.9e-07 58.9 37 70.3
SHI00440 Sapria himalayana HOM05D000023 ORTHO05D000014 6.4e-07 58.5 36 77.8
SHI06954 Sapria himalayana HOM05D000023 ORTHO05D000014 6.4e-07 58.5 34 76.5
SHI13211 Sapria himalayana HOM05D000023 ORTHO05D000014 6.4e-07 58.5 32 84.4
SHI13827 Sapria himalayana HOM05D000023 ORTHO05D000014 6.4e-07 58.5 36 72.2
SHI16068 Sapria himalayana HOM05D000023 ORTHO05D000014 6.4e-07 58.5 40 65.0
SHI28816 Sapria himalayana HOM05D000023 ORTHO05D000014 6.4e-07 58.5 38 71.1
SHI47314 Sapria himalayana HOM05D000023 ORTHO05D000014 6.4e-07 58.5 35 77.1
SHI47801 Sapria himalayana HOM05D000023 ORTHO05D000014 6.4e-07 58.5 35 77.1
SHI03371 Sapria himalayana HOM05D000023 ORTHO05D000014 8.4e-07 58.2 39 66.7
SHI07150 Sapria himalayana HOM05D000023 ORTHO05D000014 8.4e-07 58.2 35 77.1
SHI31135 Sapria himalayana HOM05D000023 ORTHO05D000014 8.4e-07 58.2 36 75.0
SHI01742 Sapria himalayana HOM05D000023 ORTHO05D000014 1.1e-06 57.8 36 77.8
SHI15276 Sapria himalayana HOM05D000023 ORTHO05D000014 1.1e-06 57.8 36 72.2
SHI27840 Sapria himalayana HOM05D000023 ORTHO05D000014 1.1e-06 57.8 36 75.0
SHI14517 Sapria himalayana HOM05D000023 ORTHO05D000014 1.4e-06 57.4 36 75.0
SHI10378 Sapria himalayana HOM05D000251 ORTHO05D000014 1.9e-06 57.0 37 67.6
SHI05409 Sapria himalayana HOM05D000023 ORTHO05D000014 2.4e-06 56.6 36 75.0
SHI21250 Sapria himalayana HOM05D000023 ORTHO05D000014 2.4e-06 56.6 36 77.8
SHI22925 Sapria himalayana HOM05D000023 ORTHO05D000014 2.4e-06 56.6 36 72.2
SHI27647 Sapria himalayana HOM05D000002 ORTHO05D000014 3.2e-06 56.2 36 75.0
SHI01849 Sapria himalayana HOM05D000023 ORTHO05D000014 4.2e-06 55.8 40 70.0
SHI04551 Sapria himalayana HOM05D000023 ORTHO05D000014 4.2e-06 55.8 36 72.2
SHI06138 Sapria himalayana HOM05D000023 ORTHO05D000014 5.4e-06 55.5 34 73.5
SHI00996 Sapria himalayana HOM05D002920 ORTHO05D000014 7.1e-06 55.1 36 75.0
SHI03328 Sapria himalayana HOM05D003492 ORTHO05D005115 7.1e-06 55.1 38 68.4
SHI20222 Sapria himalayana HOM05D000023 ORTHO05D000014 7.1e-06 55.1 34 70.6


User provided reference genes

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