Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI04460 Sapria himalayana HOM05D000004 ORTHO05D000002 9.8e-49 196.4 96 100.0
SHI07763 Sapria himalayana HOM05D000004 ORTHO05D000002 9.2e-23 110.2 84 67.9
SHI27591 Sapria himalayana HOM05D000004 ORTHO05D000002 1.0e-21 106.7 94 61.7
SHI15815 Sapria himalayana HOM05D000004 ORTHO05D000002 1.5e-20 102.8 116 50.9
SHI06328 Sapria himalayana HOM05D000004 ORTHO05D000002 2.1e-19 99.0 79 65.8
SHI14322 Sapria himalayana HOM05D000004 ORTHO05D000002 1.8e-18 95.9 59 79.7
FvH4_6g34501 Fragaria vesca HOM05D000004 ORTHO05D000002 4.0e-18 94.7 115 47.0
FvH4_1g29809 Fragaria vesca HOM05D000004 ORTHO05D000002 1.2e-17 93.2 115 48.7
Sopen01g026700 Solanum pennellii HOM05D000004 ORTHO05D000002 4.4e-17 91.3 116 44.0
CSS0037139 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 7.6e-17 90.5 115 47.8
SHI32724 Sapria himalayana HOM05D000004 ORTHO05D000002 2.9e-16 88.6 57 73.7
CSS0004339 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.7e-16 88.2 115 47.0
SHI33114 Sapria himalayana HOM05D000004 ORTHO05D000002 4.9e-16 87.8 99 50.5
SHI14899 Sapria himalayana HOM05D000004 ORTHO05D000378 8.3e-16 87.0 63 69.8
SHI12100 Sapria himalayana HOM05D000004 ORTHO05D000002 1.4e-15 86.3 80 60.0
Sopen06g016840 Solanum pennellii HOM05D000004 ORTHO05D000002 2.4e-15 85.5 116 42.2
ClCG08G000140 Citrullus lanatus HOM05D000004 ORTHO05D000002 3.2e-15 85.1 115 46.1
ClCG10G007950 Citrullus lanatus HOM05D000004 ORTHO05D000002 3.2e-15 85.1 115 46.1
Sopen04g010080 Solanum pennellii HOM05D000004 ORTHO05D000002 4.1e-15 84.7 116 42.2
Sopen07g015160 Solanum pennellii HOM05D000691 ORTHO05D000378 4.1e-15 84.7 116 42.2
Sopen12g018380 Solanum pennellii HOM05D000691 ORTHO05D000378 4.1e-15 84.7 116 42.2
Sopen05g011340 Solanum pennellii HOM05D000004 ORTHO05D000002 7.1e-15 84.0 116 41.4
SHI30396 Sapria himalayana HOM05D003769 ORTHO05D000002 9.2e-15 83.6 94 53.2
SHI07586 Sapria himalayana HOM05D000004 ORTHO05D000002 1.2e-14 83.2 54 77.8
SHI32369 Sapria himalayana HOM05D000004 ORTHO05D000002 1.2e-14 83.2 96 51.0
Sopen09g023520 Solanum pennellii HOM05D000004 ORTHO05D000002 1.2e-14 83.2 116 42.2
Sopen10g015090 Solanum pennellii HOM05D000004 ORTHO05D000002 2.1e-14 82.4 116 41.4
Sopen07g009500 Solanum pennellii HOM05D001275 ORTHO05D001570 1.0e-13 80.1 116 40.5
SHI30591 Sapria himalayana HOM05D000004 ORTHO05D000002 1.3e-13 79.7 66 63.6
Sopen02g008090 Solanum pennellii HOM05D000004 ORTHO05D000002 1.3e-13 79.7 115 41.7
Sopen02g010830 Solanum pennellii HOM05D000004 ORTHO05D000002 1.3e-13 79.7 115 41.7
SHI27205 Sapria himalayana HOM05D000004 ORTHO05D002065 3.0e-13 78.6 94 47.9
Sopen02g006530 Solanum pennellii HOM05D000004 ORTHO05D000002 3.0e-13 78.6 115 41.7
Ah.14g080150 Amaranthus hybridus HOM05D000004 ORTHO05D000002 6.6e-13 77.4 115 42.6
Sp7g05810 Schrenkiella parvula HOM05D000004 ORTHO05D000002 6.6e-13 77.4 116 44.0
Sopen06g011880 Solanum pennellii HOM05D000004 ORTHO05D000002 6.6e-13 77.4 115 42.6
CAN.G1226.33 Capsicum annuum HOM05D000004 ORTHO05D000002 8.6e-13 77.0 115 41.7
CAN.G1445.1 Capsicum annuum HOM05D000004 ORTHO05D000002 8.6e-13 77.0 115 41.7
CAN.G55.5 Capsicum annuum HOM05D000004 ORTHO05D000002 8.6e-13 77.0 115 41.7
CAN.G801.8 Capsicum annuum HOM05D000004 ORTHO05D000002 8.6e-13 77.0 115 41.7
CAN.G890.31 Capsicum annuum HOM05D000004 ORTHO05D000002 8.6e-13 77.0 115 41.7
FvH4_2g35961 Fragaria vesca HOM05D000004 ORTHO05D000002 1.1e-12 76.6 115 34.8
FvH4_4g13904 Fragaria vesca HOM05D000004 ORTHO05D000002 1.1e-12 76.6 115 34.8
FvH4_6g15221 Fragaria vesca HOM05D000004 ORTHO05D000002 1.1e-12 76.6 115 34.8
CAN.G1250.3 Capsicum annuum HOM05D000004 ORTHO05D000002 2.5e-12 75.5 115 40.9
Sopen02g010700 Solanum pennellii HOM05D000004 ORTHO05D000002 3.3e-12 75.1 115 41.7
CSS0040213 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 4.3e-12 74.7 115 37.4
Duzib132G0756 Durio zibethinus HOM05D000004 ORTHO05D000002 4.3e-12 74.7 115 36.5
SHI03396 Sapria himalayana HOM05D000004 ORTHO05D000002 4.3e-12 74.7 82 51.2
SHI15566 Sapria himalayana HOM05D000472 ORTHO05D000344 5.6e-12 74.3 71 54.9
CSS0006424 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 7.3e-12 73.9 116 38.8
SHI06773 Sapria himalayana HOM05D000004 ORTHO05D000002 7.3e-12 73.9 99 45.5
Rhsim10G0189700 Rhododendron simsii HOM05D000004 ORTHO05D000002 1.2e-11 73.2 116 39.7
Sopen04g017030 Solanum pennellii HOM05D000004 ORTHO05D000002 1.2e-11 73.2 109 42.2
SpUn0451_0010 Schrenkiella parvula HOM05D000004 ORTHO05D000002 1.6e-11 72.8 93 47.3
CSS0013920 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 4.7e-11 71.2 116 38.8
RcHm_v2.0_Chr4g0401341 Rosa chinensis HOM05D000004 ORTHO05D000002 4.7e-11 71.2 115 34.8
Sopen08g009610 Solanum pennellii HOM05D000004 ORTHO05D000002 6.2e-11 70.9 115 37.4
SHI24697 Sapria himalayana HOM05D000004 ORTHO05D000002 2.4e-10 68.9 78 52.6
Sopen01g009890 Solanum pennellii HOM05D000004 ORTHO05D000378 2.4e-10 68.9 73 49.3
RhsimMtG0001900 Rhododendron simsii HOM05D004291 ORTHO05D005620 3.1e-10 68.6 115 33.9
SHI27517 Sapria himalayana HOM05D000004 ORTHO05D000002 3.1e-10 68.6 102 44.1
SEGI_29908 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 3.1e-10 68.6 115 34.8
Sopen05g005120 Solanum pennellii HOM05D000004 ORTHO05D000002 6.8e-10 67.4 106 38.7
QL01p005990 Quercus lobata HOM05D000004 ORTHO05D000002 8.9e-10 67.0 115 36.5
QL04p041450 Quercus lobata HOM05D000004 ORTHO05D000002 8.9e-10 67.0 115 36.5
QL05p055474 Quercus lobata HOM05D000004 ORTHO05D000002 8.9e-10 67.0 115 36.5
QL93p1800_0008 Quercus lobata HOM05D000004 ORTHO05D000002 8.9e-10 67.0 115 36.5
SEGI_15568 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 8.9e-10 67.0 110 37.3
SEGI_09391 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 1.2e-09 66.6 112 34.8
Sopen04g009170 Solanum pennellii HOM05D000004 ORTHO05D000002 2.0e-09 65.9 56 58.9
SEGI_13593 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 4.4e-09 64.7 106 36.8
SHI25081 Sapria himalayana HOM05D000004 ORTHO05D000002 5.8e-09 64.3 39 76.9
Sopen02g006770 Solanum pennellii HOM05D000004 ORTHO05D000002 5.8e-09 64.3 56 57.1
SHI21457 Sapria himalayana HOM05D000004 ORTHO05D000002 7.6e-09 63.9 71 49.3
Sopen02g009190 Solanum pennellii HOM05D000004 ORTHO05D000002 9.9e-09 63.5 56 57.1
Sopen00g001810 Solanum pennellii HOM05D000004 ORTHO05D000002 1.3e-08 63.2 105 41.9
Sopen02g010310 Solanum pennellii HOM05D000004 ORTHO05D000002 1.7e-08 62.8 85 44.7
Sopen03g024480 Solanum pennellii HOM05D000004 ORTHO05D000002 2.2e-08 62.4 57 52.6
Sopen03g012390 Solanum pennellii HOM05D000004 ORTHO05D000002 2.9e-08 62.0 116 32.8
SEGI_41259 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 3.8e-08 61.6 103 32.0
Sopen10g017900 Solanum pennellii HOM05D000004 ORTHO05D000002 3.8e-08 61.6 56 57.1
SHI22221 Sapria himalayana HOM05D000004 ORTHO05D000002 4.9e-08 61.2 36 77.8
SEGI_35312 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 4.9e-08 61.2 103 35.9
Sp7g09270 Schrenkiella parvula HOM05D000004 ORTHO05D000002 8.4e-08 60.5 57 54.4
SEGI_21685 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 1.4e-07 59.7 110 34.5
Sopen04g014770 Solanum pennellii HOM05D000004 ORTHO05D000002 1.4e-07 59.7 116 33.6
Sopen02g012140 Solanum pennellii HOM05D000004 ORTHO05D000002 1.9e-07 59.3 56 51.8
Sopen11g013950 Solanum pennellii HOM05D000004 ORTHO05D000002 1.9e-07 59.3 116 33.6
CSS0009193 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.4e-07 58.9 57 50.9
Sp4g07920 Schrenkiella parvula HOM05D000004 ORTHO05D000002 2.4e-07 58.9 93 39.8
AUR62035181 Chenopodium quinoa HOM05D000004 ORTHO05D000002 3.2e-07 58.5 115 33.9
Sopen02g012390 Solanum pennellii HOM05D000004 ORTHO05D000002 4.2e-07 58.2 116 32.8
Sopen03g033370 Solanum pennellii HOM05D000004 ORTHO05D000002 4.2e-07 58.2 116 32.8
Sopen04g026810 Solanum pennellii HOM05D000004 ORTHO05D000002 4.2e-07 58.2 116 32.8
Sopen05g012140 Solanum pennellii HOM05D000004 ORTHO05D000002 4.2e-07 58.2 116 32.8
Sopen07g017800 Solanum pennellii HOM05D000004 ORTHO05D000002 4.2e-07 58.2 116 32.8
Sopen07g019030 Solanum pennellii HOM05D000691 ORTHO05D000378 4.2e-07 58.2 78 41.0
Sopen07g025250 Solanum pennellii HOM05D000004 ORTHO05D000002 4.2e-07 58.2 116 32.8
Sopen10g005990 Solanum pennellii HOM05D000004 ORTHO05D000002 4.2e-07 58.2 116 32.8
Sopen12g017890 Solanum pennellii HOM05D000004 ORTHO05D000002 4.2e-07 58.2 116 32.8
Sopen12g024530 Solanum pennellii HOM05D000004 ORTHO05D000002 4.2e-07 58.2 116 32.8
Ah.14g081120 Amaranthus hybridus HOM05D000004 ORTHO05D000002 5.4e-07 57.8 57 52.6
CSS0034382 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 5.4e-07 57.8 57 50.9
SEGI_10156 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 5.4e-07 57.8 110 36.4
Sopen04g014250 Solanum pennellii HOM05D000004 ORTHO05D000378 5.4e-07 57.8 92 38.0
Sopen05g026540 Solanum pennellii HOM05D000004 ORTHO05D000002 5.4e-07 57.8 118 32.2
QL05p016549 Quercus lobata HOM05D000004 ORTHO05D000002 7.1e-07 57.4 56 50.0
SHI33646 Sapria himalayana HOM05D000004 ORTHO05D000002 7.1e-07 57.4 74 41.9
SHI44860 Sapria himalayana HOM05D000004 ORTHO05D000002 7.1e-07 57.4 57 47.4
Sp7g07390 Schrenkiella parvula HOM05D000004 ORTHO05D000002 7.1e-07 57.4 52 57.7
Sopen02g010330 Solanum pennellii HOM05D000004 ORTHO05D000002 9.3e-07 57.0 116 31.9
Sopen02g011110 Solanum pennellii HOM05D000004 ORTHO05D000002 9.3e-07 57.0 93 37.6
Sopen09g009570 Solanum pennellii HOM05D000004 ORTHO05D000002 9.3e-07 57.0 116 32.8
SpUn0003_0110 Schrenkiella parvula HOM05D000004 ORTHO05D000002 1.2e-06 56.6 107 34.6
Sopen03g018700 Solanum pennellii HOM05D000014 ORTHO05D000016 1.2e-06 56.6 92 39.1
Sopen05g009900 Solanum pennellii HOM05D000004 ORTHO05D000002 1.2e-06 56.6 116 31.9
Sopen07g011130 Solanum pennellii HOM05D000004 ORTHO05D000002 1.2e-06 56.6 116 31.9
Rhsim02G0166800 Rhododendron simsii HOM05D000004 ORTHO05D000002 1.6e-06 56.2 93 39.8
SHI27144 Sapria himalayana HOM05D000004 ORTHO05D000002 1.6e-06 56.2 39 71.8
Sopen10g017950 Solanum pennellii HOM05D000014 ORTHO05D000016 1.6e-06 56.2 116 31.9
Sopen09g014160 Solanum pennellii HOM05D000004 ORTHO05D000002 2.1e-06 55.8 56 48.2
Sopen11g021550 Solanum pennellii HOM05D000004 ORTHO05D000002 2.1e-06 55.8 116 31.9
Sopen04g020730 Solanum pennellii HOM05D000004 ORTHO05D000002 2.7e-06 55.5 116 31.9
Sopen09g025530 Solanum pennellii HOM05D000004 ORTHO05D000002 2.7e-06 55.5 116 31.0
PGSC0003DMG400000388 Solanum tuberosum HOM05D000004 ORTHO05D000002 2.7e-06 55.5 50 54.0
Sopen10g020660 Solanum pennellii HOM05D000004 ORTHO05D000002 3.5e-06 55.1 55 50.9
RcHm_v2.0_Chr7g0200201 Rosa chinensis HOM05D000004 ORTHO05D000002 4.6e-06 54.7 56 41.1
SEGI_24289 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 4.6e-06 54.7 56 46.4
FvH4_6g33012 Fragaria vesca HOM05D000004 ORTHO05D000002 6.0e-06 54.3 75 42.7
EL10Ac9g20846 Beta vulgaris HOM05D000004 ORTHO05D000002 7.8e-06 53.9 116 32.8
Rhsim01G0086500 Rhododendron simsii HOM05D000004 ORTHO05D000002 7.8e-06 53.9 57 49.1
Sopen12g024680 Solanum pennellii HOM05D000004 ORTHO05D000002 7.8e-06 53.9 115 33.0


User provided reference genes

Program Settings