Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI04239 Sapria himalayana HOM05D007610 ORTHO05D009592 1.6e-82 309.3 148 100.0
VMungo1080G1821 Vigna mungo HOM05D007610 ORTHO05D009592 2.9e-15 85.9 79 53.2
Lj6g0018100 Lotus japonicus HOM05D007610 ORTHO05D009592 1.4e-14 83.6 73 53.4
TPR.G1215 Trifolium pratense HOM05D007610 ORTHO05D009592 2.4e-14 82.8 76 52.6
arahy.Tifrunner.gnm1.ann1.TJ8EEM Arachis hypogaea HOM05D007610 ORTHO05D009592 3.2e-14 82.4 73 53.4
arahy.Tifrunner.gnm1.ann1.Z969QS Arachis hypogaea HOM05D007610 ORTHO05D009592 3.2e-14 82.4 73 53.4
CANSAT56G1772 Cannabis sativa HOM05D007610 ORTHO05D009592 5.4e-14 81.6 73 52.1
Glyma.12G229900 Glycine max HOM05D007610 ORTHO05D009592 7.1e-14 81.3 73 52.1
Phvul.005G082100 Phaseolus vulgaris HOM05D007610 ORTHO05D009592 7.1e-14 81.3 73 52.1
Ciclev10017354m.g Citrus clementina HOM05D007610 ORTHO05D009592 9.2e-14 80.9 74 51.4
Duzib128G1002 Durio zibethinus HOM05D007610 ORTHO05D009592 9.2e-14 80.9 73 50.7
PGR083G1775 Punica granatum HOM05D007610 ORTHO05D009592 9.2e-14 80.9 73 52.1
Atru.chr1.2755 Acer truncatum HOM05D007610 ORTHO05D009592 1.2e-13 80.5 73 52.1
Actinidia08923 Actinidia chinensis HOM05D007610 ORTHO05D009592 1.2e-13 80.5 79 49.4
Manes.06G155800 Manihot esculenta HOM05D007610 ORTHO05D009592 1.2e-13 80.5 73 50.7
Cpa.g.c36937 Carica papaya HOM05D007610 ORTHO05D009592 2.1e-13 79.7 73 52.1
CiPaw.10G111700 Carya illinoinensis HOM05D007610 ORTHO05D009592 2.1e-13 79.7 73 52.1
Eucgr.H00670 Eucalyptus grandis HOM05D007610 ORTHO05D009592 2.1e-13 79.7 73 52.1
Glyma.13G269700 Glycine max HOM05D007610 ORTHO05D009592 2.1e-13 79.7 73 50.7
Nn4g24567 Nelumbo nucifera HOM05D007610 ORTHO05D009592 2.7e-13 79.3 73 50.7
ATR0743G067 Amborella trichopoda HOM05D007610 ORTHO05D009592 3.5e-13 79.0 73 50.7
TWI75G0175 Tripterygium wilfordii HOM05D007610 ORTHO05D009592 3.5e-13 79.0 73 50.7
CDE07G1447 Ceratophyllum demersum HOM05D007610 ORTHO05D009592 4.6e-13 78.6 73 50.7
Medtr2g076300 Medicago truncatula HOM05D007610 ORTHO05D009592 4.6e-13 78.6 79 46.8
Sed0022524 Sechium edule HOM05D007610 ORTHO05D009592 6.0e-13 78.2 73 49.3
MELO3C012466.2 Cucumis melo HOM05D007610 ORTHO05D009592 7.8e-13 77.8 73 49.3
CsaV3_5G036700 Cucumis sativus L. HOM05D007610 ORTHO05D009592 7.8e-13 77.8 73 49.3
Gohir.A08G224300 Gossypium hirsutum HOM05D007610 ORTHO05D009592 7.8e-13 77.8 73 50.7
Gohir.D08G244600 Gossypium hirsutum HOM05D007610 ORTHO05D009592 7.8e-13 77.8 73 50.7
Gorai.004G260900 Gossypium raimondii HOM05D007610 ORTHO05D009592 7.8e-13 77.8 73 50.7
Psat5g237320 Pisum sativum HOM05D007610 ORTHO05D009592 7.8e-13 77.8 73 50.7
Potri.008G010300 Populus trichocarpa HOM05D007610 ORTHO05D009592 7.8e-13 77.8 73 46.6
Lalb_Chr20g0109261 Lupinus albus HOM05D007610 ORTHO05D009592 1.0e-12 77.4 73 49.3
Prupe.1G386000 Prunus persica HOM05D007610 ORTHO05D009592 1.0e-12 77.4 73 49.3
Nitab4.5_0007669g0050 Nicotiana tabacum HOM05D007610 ORTHO05D009592 1.3e-12 77.0 73 49.3
CAN.G1008.28 Capsicum annuum HOM05D007610 ORTHO05D009592 1.7e-12 76.6 73 49.3
PSO675G0688 Papaver somniferum HOM05D007610 ORTHO05D009592 1.7e-12 76.6 73 46.6
PSO732G0180 Papaver somniferum HOM05D007610 ORTHO05D009592 1.7e-12 76.6 73 46.6
Zm00001eb102930 Zea mays HOM05D007610 ORTHO05D009592 1.7e-12 76.6 73 47.9
Lalb_Chr01g0016601 Lupinus albus HOM05D007610 ORTHO05D009592 2.3e-12 76.3 73 50.7
Potri.010G248800 Populus trichocarpa HOM05D007610 ORTHO05D009592 2.3e-12 76.3 73 46.6
Sed0001467 Sechium edule HOM05D007610 ORTHO05D009592 2.3e-12 76.3 73 47.9
Thecc.05G204400 Theobroma cacao HOM05D007610 ORTHO05D009592 2.3e-12 76.3 73 49.3
EL10Ac8g19396 Beta vulgaris HOM05D007610 ORTHO05D009592 3.0e-12 75.9 73 50.7
Sopen03g036810 Solanum pennellii HOM05D007610 ORTHO05D009592 3.0e-12 75.9 73 47.9
PGSC0003DMG400014163 Solanum tuberosum HOM05D007610 ORTHO05D009592 3.0e-12 75.9 73 47.9
Ah.09g231800 Amaranthus hybridus HOM05D007610 ORTHO05D009592 3.9e-12 75.5 73 49.3
GSVIVG01015989001 Vitis vinifera HOM05D007610 ORTHO05D009592 3.9e-12 75.5 73 47.9
MD08G1038400 Malus domestica HOM05D007610 ORTHO05D009592 6.6e-12 74.7 73 46.6
FvH4_2g40490 Fragaria vesca HOM05D007610 ORTHO05D009592 8.6e-12 74.3 73 47.9
FAN27G3309 Fragaria x ananassa HOM05D003072 ORTHO05D009592 8.6e-12 74.3 73 47.9
Solyc03g117900.3 Solanum lycopersicum HOM05D007610 ORTHO05D009592 1.5e-11 73.6 73 46.6
Peaxi162Scf00314g00832 Petunia axillaris HOM05D007610 ORTHO05D009592 1.9e-11 73.2 73 46.6
GSVIVG01015971001 Vitis vinifera HOM05D007610 ORTHO05D009592 1.9e-11 73.2 73 46.6
CSS0020010 Camellia sinensis var. sinensis HOM05D007610 ORTHO05D009592 2.5e-11 72.8 73 47.9
Nitab4.5_0000976g0340 Nicotiana tabacum HOM05D007610 ORTHO05D009592 2.5e-11 72.8 73 46.6
RcHm_v2.0_Chr6g0300241 Rosa chinensis HOM05D007610 ORTHO05D009592 3.3e-11 72.4 73 46.6
CSS0005029 Camellia sinensis var. sinensis HOM05D007610 ORTHO05D009592 5.6e-11 71.6 73 46.6
Hma1.2p1_0338F.1_g129570 Hydrangea macrophylla HOM05D007610 ORTHO05D009592 5.6e-11 71.6 73 46.6
Sabra08G0006100 Salix brachista HOM05D002706 ORTHO05D003253 5.6e-11 71.6 74 44.6
Actinidia18276 Actinidia chinensis HOM05D007610 ORTHO05D009592 7.3e-11 71.2 73 46.6
Cc04_g05530 Coffea canephora HOM05D007610 ORTHO05D009592 7.3e-11 71.2 73 46.6
Duzib106G1141 Durio zibethinus HOM05D007610 ORTHO05D009592 7.3e-11 71.2 74 48.6
THA.LOC104823659 Tarenaya hassleriana HOM05D007610 ORTHO05D009592 7.3e-11 71.2 73 47.9
CARHR011080 Cardamine hirsuta HOM05D007610 ORTHO05D009592 9.5e-11 70.9 73 47.9
Dinv13690 Davidia involucrata HOM05D007610 ORTHO05D009592 9.5e-11 70.9 73 46.6
ECA246G4312 Erigeron canadensis HOM05D007610 ORTHO05D009592 9.5e-11 70.9 73 46.6
HanXRQChr05g0157571 Helianthus annuus HOM05D007610 ORTHO05D009592 9.5e-11 70.9 73 46.6
HanXRQChr06g0174541 Helianthus annuus HOM05D007610 ORTHO05D009592 9.5e-11 70.9 73 46.6
Mapoly0035s0053 Marchantia polymorpha HOM05D007610 ORTHO05D009592 9.5e-11 70.9 73 43.8
AL1G21800 Arabidopsis lyrata HOM05D007610 ORTHO05D009592 1.2e-10 70.5 73 45.2
Sc10g0005460 Simmondsia chinensis HOM05D007610 ORTHO05D009592 1.2e-10 70.5 73 46.6
AT1G10865 Arabidopsis thaliana HOM05D007610 ORTHO05D009592 1.6e-10 70.1 73 46.6
BolC8t52386H Brassica oleracea HOM05D007610 ORTHO05D009592 1.6e-10 70.1 73 46.6
Migut.I00647 Erythranthe guttata HOM05D007610 ORTHO05D009592 1.6e-10 70.1 73 46.6
Oeu036461.1 Olea europaea HOM05D007610 ORTHO05D009592 1.6e-10 70.1 74 45.9
HPP92_003445 Vanilla planifolia HOM05D007610 ORTHO05D009592 1.6e-10 70.1 70 45.7
MSTRG.11209 Avicennia marina HOM05D007610 ORTHO05D009592 2.1e-10 69.7 73 45.2
Aa31LG1G3990 Aethionema arabicum HOM05D007610 ORTHO05D009592 2.8e-10 69.3 73 46.6
BcaNung06200 Brassica carinata HOM05D000246 ORTHO05D005907 2.8e-10 69.3 73 46.6
A09p64730 Brassica napus HOM05D007610 ORTHO05D009592 2.8e-10 69.3 73 46.6
C08p48470 Brassica napus HOM05D007610 ORTHO05D009592 2.8e-10 69.3 73 46.6
BraA09t41821Z Brassica rapa HOM05D007610 ORTHO05D009592 2.8e-10 69.3 73 46.6
Thhalv10009851m.g Eutrema salsugineum HOM05D007610 ORTHO05D009592 2.8e-10 69.3 73 46.6
Sp1g09560 Schrenkiella parvula HOM05D007610 ORTHO05D009592 2.8e-10 69.3 73 46.6
Lsat_1_v5_gn_1_30601 Lactuca sativa HOM05D007610 ORTHO05D009592 3.6e-10 68.9 73 45.2
Oeu036457.1 Olea europaea HOM05D007610 ORTHO05D009592 3.6e-10 68.9 74 44.6
Carub.0001s1040 Capsella rubella HOM05D007610 ORTHO05D009592 4.7e-10 68.6 73 46.6
CBR_g23045 Chara braunii HOM05D007610 ORTHO05D009592 4.7e-10 68.6 73 43.8
DCAR_021387 Daucus carota HOM05D007610 ORTHO05D009592 1.1e-09 67.4 76 42.1
MD00G1038600 Malus domestica HOM05D007610 ORTHO05D009592 1.4e-09 67.0 71 43.7
unitig_8.g3047 Utricularia gibba HOM05D005498 ORTHO05D006719 1.4e-09 67.0 74 43.2
Migut.K01190 Erythranthe guttata HOM05D007610 ORTHO05D009592 2.4e-09 66.2 74 44.6
AagrBONN_evm.TU.Sc2ySwM_228.2676 Anthoceros agrestis HOM05D007610 ORTHO05D009592 1.5e-08 63.5 73 41.1
AagrBONN_evm.TU.Sc2ySwM_344.3800 Anthoceros agrestis HOM05D007610 ORTHO05D009592 7.6e-08 61.2 73 39.7
Dinv23251 Davidia involucrata HOM05D007610 ORTHO05D009592 9.9e-08 60.8 34 70.6


User provided reference genes

Program Settings