Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI04152 Sapria himalayana HOM05D008143 ORTHO05D010256 1.8e-53 212.6 133 100.0
Oeu020235.1 Olea europaea HOM05D008143 ORTHO05D010256 3.0e-16 89.0 103 53.4
Cpa.g.sc41.41 Carica papaya HOM05D008143 ORTHO05D010256 3.4e-15 85.5 89 57.3
Dinv43993 Davidia involucrata HOM05D008143 ORTHO05D010256 4.4e-15 85.1 90 60.0
PGSC0003DMG400001819 Solanum tuberosum HOM05D008143 ORTHO05D010256 5.7e-15 84.7 104 55.8
Migut.N01814 Erythranthe guttata HOM05D008143 ORTHO05D010256 7.5e-15 84.3 59 76.3
Ca_26206_v3 Cicer arietinum L. HOM05D008143 ORTHO05D010256 9.8e-15 84.0 69 68.1
Medtr7g034335 Medicago truncatula HOM05D008143 ORTHO05D010256 1.3e-14 83.6 96 52.1
Ciclev10023977m.g Citrus clementina HOM05D008143 ORTHO05D010256 1.7e-14 83.2 59 72.9
Atru.chr5.8 Acer truncatum HOM05D008143 ORTHO05D010256 2.2e-14 82.8 69 66.7
Sopen01g032540 Solanum pennellii HOM05D008143 ORTHO05D010256 2.8e-14 82.4 59 78.0
Dinv43549 Davidia involucrata HOM05D000307 ORTHO05D010256 3.7e-14 82.0 101 54.5
Dinv43557 Davidia involucrata HOM05D008143 ORTHO05D010256 3.7e-14 82.0 101 54.5
Lj1g0022952 Lotus japonicus HOM05D008143 ORTHO05D010256 3.7e-14 82.0 103 52.4
Solyc01g080950.3 Solanum lycopersicum HOM05D008143 ORTHO05D010256 3.7e-14 82.0 104 54.8
Sed0007849 Sechium edule HOM05D000473 ORTHO05D009707 4.9e-14 81.6 59 71.2
PGR042G2567 Punica granatum HOM05D008143 ORTHO05D010256 6.3e-14 81.3 59 72.9
CAN.G700.4 Capsicum annuum HOM05D008143 ORTHO05D010256 1.1e-13 80.5 59 72.9
Hma1.2p1_0076F.1_g039560 Hydrangea macrophylla HOM05D008143 ORTHO05D010256 1.1e-13 80.5 102 54.9
arahy.Tifrunner.gnm1.ann1.3N3IDJ Arachis hypogaea HOM05D008143 ORTHO05D010256 1.4e-13 80.1 59 74.6
MD00G1098100 Malus domestica HOM05D008143 ORTHO05D010256 1.4e-13 80.1 59 72.9
GSVIVG01026763001 Vitis vinifera HOM05D008143 ORTHO05D010256 1.4e-13 80.1 59 74.6
Prupe.2G109300 Prunus persica HOM05D008143 ORTHO05D010256 2.4e-13 79.3 59 71.2
HanXRQChr01g0020571 Helianthus annuus HOM05D008143 ORTHO05D010256 3.2e-13 79.0 59 67.8
TWI59G0267 Tripterygium wilfordii HOM05D008143 ORTHO05D010256 3.2e-13 79.0 101 51.5
ECA248G2885 Erigeron canadensis HOM05D008143 ORTHO05D010256 4.1e-13 78.6 59 69.5
QL04p024258 Quercus lobata HOM05D008143 ORTHO05D010256 4.1e-13 78.6 104 51.0
arahy.Tifrunner.gnm1.ann1.H93UBA Arachis hypogaea HOM05D008143 ORTHO05D010256 5.4e-13 78.2 104 50.0
CiPaw.14G012000 Carya illinoinensis HOM05D008143 ORTHO05D010256 7.0e-13 77.8 59 71.2
FvH4_7g08030 Fragaria vesca HOM05D008143 ORTHO05D010256 1.2e-12 77.0 59 71.2
FAN01G0067 Fragaria x ananassa HOM05D008143 ORTHO05D010256 1.2e-12 77.0 59 71.2
FAN10G1551 Fragaria x ananassa HOM05D008143 ORTHO05D010256 1.2e-12 77.0 59 71.2
Glyma.06G310300 Glycine max HOM05D008143 ORTHO05D010256 1.6e-12 76.6 69 60.9
Sabra14G0137200 Salix brachista HOM05D008143 ORTHO05D010256 1.6e-12 76.6 72 62.5
Glyma.04G128500 Glycine max HOM05D008143 ORTHO05D010256 2.7e-12 75.9 69 62.3
RcHm_v2.0_Chr1g0341271 Rosa chinensis HOM05D008143 ORTHO05D010256 2.7e-12 75.9 59 71.2
Psat3g161880 Pisum sativum HOM05D008143 ORTHO05D010256 3.5e-12 75.5 69 62.3
Migut.N01697 Erythranthe guttata HOM05D008143 ORTHO05D010256 5.9e-12 74.7 59 69.5
Sabra14G0139000 Salix brachista HOM05D008143 ORTHO05D010256 5.9e-12 74.7 72 61.1
MSTRG.28120 Avicennia marina HOM05D008143 ORTHO05D010256 7.8e-12 74.3 59 69.5
FAN03G3180 Fragaria x ananassa HOM05D008143 ORTHO05D010256 1.0e-11 73.9 58 69.0
Cc02_g26140 Coffea canephora HOM05D008143 ORTHO05D010256 1.7e-11 73.2 59 66.1
Nitab4.5_0001209g0030 Nicotiana tabacum HOM05D008143 ORTHO05D010256 1.7e-11 73.2 76 57.9
Peaxi162Scf01110g00012 Petunia axillaris HOM05D008143 ORTHO05D010256 3.9e-11 72.0 104 51.0
Aqoxy3G02407 Aquilegia oxysepala HOM05D008143 ORTHO05D010256 8.6e-11 70.9 95 48.4
SGA_v2.0_scaffold4G02202 Striga asiatica HOM05D008143 ORTHO05D010256 8.6e-11 70.9 96 50.0
Actinidia21604 Actinidia chinensis HOM05D008143 ORTHO05D010256 1.1e-10 70.5 87 51.7
Sed0022797 Sechium edule HOM05D008143 ORTHO05D010256 1.1e-10 70.5 59 67.8
ClCG05G002660 Citrullus lanatus HOM05D008143 ORTHO05D010256 1.9e-10 69.7 59 67.8
MELO3C006232.2 Cucumis melo HOM05D008143 ORTHO05D010256 1.9e-10 69.7 59 67.8
CsaV3_3G010110 Cucumis sativus L. HOM05D008143 ORTHO05D010256 4.3e-10 68.6 59 66.1
Duzib128G1063 Durio zibethinus HOM05D008143 ORTHO05D010256 5.6e-10 68.2 59 61.0
Potri.014G178900 Populus trichocarpa HOM05D008143 ORTHO05D010256 9.5e-10 67.4 71 56.3
CiPaw.13G019200 Carya illinoinensis HOM05D008143 ORTHO05D010256 2.1e-09 66.2 59 61.0
Nn1g00548 Nelumbo nucifera HOM05D008143 ORTHO05D010256 3.6e-09 65.5 69 56.5
Thecc.10G157800 Theobroma cacao HOM05D008143 ORTHO05D010256 3.6e-09 65.5 59 61.0
TAR636G2193 Trochodendron aralioides HOM05D008143 ORTHO05D010256 6.1e-09 64.7 115 42.6
MD02G1236800 Malus domestica HOM05D008143 ORTHO05D010256 3.1e-08 62.4 45 73.3
PSO017G2691 Papaver somniferum HOM05D008143 ORTHO05D010256 8.9e-08 60.8 59 54.2
DCAR_015763 Daucus carota HOM05D008143 ORTHO05D010256 2.0e-07 59.7 78 48.7
Lalb_Chr19g0126471 Lupinus albus HOM05D008143 ORTHO05D010256 2.0e-07 59.7 83 47.0
Nn6g33614 Nelumbo nucifera HOM05D008143 ORTHO05D010256 2.6e-07 59.3 59 55.9
Phvul.005G016300 Phaseolus vulgaris HOM05D008143 ORTHO05D010256 3.4e-07 58.9 74 47.3
Sabra05G0099100 Salix brachista HOM05D008143 ORTHO05D010256 5.8e-07 58.2 55 60.0
AUR62023336 Chenopodium quinoa HOM05D008143 ORTHO05D010256 1.7e-06 56.6 46 73.9


User provided reference genes

Program Settings