Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI04066 Sapria himalayana HOM05D006852 ORTHO05D008585 1.6e-141 506.1 261 100.0
Manes.07G006500 Manihot esculenta HOM05D006852 ORTHO05D008585 1.5e-72 276.9 242 59.9
Eucgr.G03378 Eucalyptus grandis HOM05D006852 ORTHO05D008585 5.9e-72 275.0 253 58.5
Cfa010769 Carpinus fangiana HOM05D006852 ORTHO05D008585 6.5e-71 271.6 245 64.1
Thecc.01G410400 Theobroma cacao HOM05D006852 ORTHO05D008585 8.5e-71 271.2 162 81.5
FvH4_7g01110 Fragaria vesca HOM05D006852 ORTHO05D008585 1.4e-70 270.4 242 59.9
CiPaw.14G000200 Carya illinoinensis HOM05D006852 ORTHO05D008585 2.5e-70 269.6 245 63.7
FAN06G4754 Fragaria x ananassa HOM05D006852 ORTHO05D008585 2.5e-70 269.6 244 59.4
COL.COLO4_31169 Corchorus olitorius HOM05D006852 ORTHO05D008585 5.5e-70 268.5 164 79.3
Prupe.2G014400 Prunus persica HOM05D006852 ORTHO05D008585 7.2e-70 268.1 167 77.8
ECA248G0614 Erigeron canadensis HOM05D006852 ORTHO05D008585 9.4e-70 267.7 240 62.1
Gohir.A08G144200 Gossypium hirsutum HOM05D006852 ORTHO05D008585 3.6e-69 265.8 163 78.5
Hma1.2p1_0293F.1_g116040 Hydrangea macrophylla HOM05D006852 ORTHO05D008585 3.6e-69 265.8 242 58.3
Peaxi162Scf00339g00115 Petunia axillaris HOM05D006852 ORTHO05D008585 3.6e-69 265.8 169 75.7
MD07G1011200 Malus domestica HOM05D006852 ORTHO05D008585 7.9e-69 264.6 242 62.0
THA.LOC104801980 Tarenaya hassleriana HOM05D006852 ORTHO05D008585 7.9e-69 264.6 240 57.9
TWI79G0862 Tripterygium wilfordii HOM05D006852 ORTHO05D008585 7.9e-69 264.6 243 59.7
Actinidia31067 Actinidia chinensis HOM05D006852 ORTHO05D008585 1.0e-68 264.2 161 80.7
Lsat_1_v5_gn_1_106940 Lactuca sativa HOM05D006852 ORTHO05D008585 1.0e-68 264.2 242 62.4
Potri.001G266200 Populus trichocarpa HOM05D006852 ORTHO05D008585 1.0e-68 264.2 244 57.4
RcHm_v2.0_Chr1g0316111 Rosa chinensis HOM05D006852 ORTHO05D008585 1.0e-68 264.2 162 77.8
Ciclev10032186m.g Citrus clementina HOM05D006852 ORTHO05D008585 1.4e-68 263.8 164 77.4
Lj3g0018236 Lotus japonicus HOM05D006852 ORTHO05D008585 1.4e-68 263.8 242 62.8
Dinv09352 Davidia involucrata HOM05D006852 ORTHO05D008585 1.8e-68 263.5 243 63.8
CAN.G857.11 Capsicum annuum HOM05D006852 ORTHO05D008585 3.0e-68 262.7 248 57.7
Atru.chr11.2623 Acer truncatum HOM05D006852 ORTHO05D008585 3.9e-68 262.3 185 70.8
Duzib138G0005 Durio zibethinus HOM05D006852 ORTHO05D008585 3.9e-68 262.3 163 78.5
Glyma.13G202400 Glycine max HOM05D006852 ORTHO05D008585 3.9e-68 262.3 164 77.4
Nitab4.5_0000125g0260 Nicotiana tabacum HOM05D006852 ORTHO05D008585 3.9e-68 262.3 166 75.9
Nitab4.5_0006579g0050 Nicotiana tabacum HOM05D006852 ORTHO05D008585 3.9e-68 262.3 166 75.9
Glyma.12G236900 Glycine max HOM05D006852 ORTHO05D008585 5.1e-68 261.9 164 77.4
Lalb_Chr03g0034091 Lupinus albus HOM05D006852 ORTHO05D008585 5.1e-68 261.9 162 77.2
Sed0010309 Sechium edule HOM05D006852 ORTHO05D008585 6.7e-68 261.5 164 75.6
Psat4g148920 Pisum sativum HOM05D006852 ORTHO05D008585 8.8e-68 261.2 243 62.6
QL04p006320 Quercus lobata HOM05D006852 ORTHO05D008585 8.8e-68 261.2 278 55.8
CANSAT80G1911 Cannabis sativa HOM05D006852 ORTHO05D008585 1.5e-67 260.4 160 76.9
Gorai.004G172200 Gossypium raimondii HOM05D006852 ORTHO05D008585 1.5e-67 260.4 160 78.8
Sc10g0000090 Simmondsia chinensis HOM05D006852 ORTHO05D008585 1.5e-67 260.4 167 75.4
arahy.Tifrunner.gnm1.ann1.5TR8MX Arachis hypogaea HOM05D006852 ORTHO05D008585 2.6e-67 259.6 164 75.6
Phvul.011G211400 Phaseolus vulgaris HOM05D006852 ORTHO05D008585 4.4e-67 258.8 162 77.2
MELO3C023552.2 Cucumis melo HOM05D006852 ORTHO05D008585 7.4e-67 258.1 161 75.8
Solyc04g074660.3 Solanum lycopersicum HOM05D006852 ORTHO05D008585 7.4e-67 258.1 164 76.2
Gohir.D08G165200 Gossypium hirsutum HOM05D006852 ORTHO05D008585 9.7e-67 257.7 160 78.1
Sopen04g029630 Solanum pennellii HOM05D006852 ORTHO05D008585 2.2e-66 256.5 164 75.6
AL7G40800 Arabidopsis lyrata HOM05D006852 ORTHO05D008585 2.8e-66 256.1 164 75.6
AT4G15030 Arabidopsis thaliana HOM05D006852 ORTHO05D008585 2.8e-66 256.1 164 75.0
BolC1t02738H Brassica oleracea HOM05D006852 ORTHO05D008585 3.7e-66 255.8 245 53.9
Nn7g36210 Nelumbo nucifera HOM05D006852 ORTHO05D008585 3.7e-66 255.8 164 76.2
EL10Ac2g04333 Beta vulgaris HOM05D006852 ORTHO05D008585 6.3e-66 255.0 162 75.9
HanXRQChr01g0015721 Helianthus annuus HOM05D006852 ORTHO05D008585 6.3e-66 255.0 164 74.4
PGSC0003DMG400030817 Solanum tuberosum HOM05D006852 ORTHO05D008585 1.1e-65 254.2 164 75.0
BcaNung00310 Brassica carinata HOM05D006852 ORTHO05D008585 4.1e-65 252.3 164 74.4
CsaV3_7G031040 Cucumis sativus L. HOM05D006852 ORTHO05D008585 5.3e-65 251.9 172 71.5
A01p22510 Brassica napus HOM05D006852 ORTHO05D008585 7.0e-65 251.5 164 73.8
C01p28040 Brassica napus HOM05D006852 ORTHO05D008585 7.0e-65 251.5 164 73.8
Carub.0007s2707 Capsella rubella HOM05D006852 ORTHO05D008585 7.0e-65 251.5 164 73.8
Medtr8g037265 Medicago truncatula HOM05D006852 ORTHO05D008585 7.0e-65 251.5 243 60.9
PGR031G2977 Punica granatum HOM05D006852 ORTHO05D008585 7.0e-65 251.5 160 75.0
Thhalv10026084m.g Eutrema salsugineum HOM05D006852 ORTHO05D008585 9.1e-65 251.1 241 53.5
Sp7g13213 Schrenkiella parvula HOM05D006852 ORTHO05D008585 1.2e-64 250.8 164 73.8
CARHR221730 Cardamine hirsuta HOM05D006852 ORTHO05D008585 2.6e-64 249.6 162 73.5
PSO384G4724 Papaver somniferum HOM05D006852 ORTHO05D008585 2.6e-64 249.6 164 73.8
PSO339G6046 Papaver somniferum HOM05D006852 ORTHO05D008585 3.5e-64 249.2 270 51.9
Rhsim07G0056000 Rhododendron simsii HOM05D006852 ORTHO05D008585 4.5e-64 248.8 155 78.7
BcaC09g50182 Brassica carinata HOM05D006852 ORTHO05D008585 5.0e-63 245.4 164 72.0
HPP92_009588 Vanilla planifolia HOM05D006852 ORTHO05D008585 5.0e-63 245.4 163 73.0
AUR62023069 Chenopodium quinoa HOM05D006852 ORTHO05D008585 8.5e-63 244.6 219 58.4
Zm00001eb115340 Zea mays HOM05D006852 ORTHO05D008585 1.9e-62 243.4 160 72.5
ATR0332G098 Amborella trichopoda HOM05D006852 ORTHO05D008585 2.5e-62 243.0 164 73.2
Oeu010800.1 Olea europaea HOM05D006852 ORTHO05D008585 2.5e-62 243.0 150 78.7
ClCG09G004140 Citrullus lanatus HOM05D006852 ORTHO05D008585 5.5e-62 241.9 150 76.7
FAN03G0769 Fragaria x ananassa HOM05D006852 ORTHO05D008585 9.4e-62 241.1 296 50.0
Aqoxy1G00289 Aquilegia oxysepala HOM05D006852 ORTHO05D008585 1.2e-61 240.7 164 73.2
SEGI_37436 Sequoiadendron giganteum HOM05D006852 ORTHO05D008585 1.6e-61 240.4 163 72.4
Aa31LG9G2320 Aethionema arabicum HOM05D006852 ORTHO05D008585 2.7e-61 239.6 192 63.0
vmacro13669 Vaccinium macrocarpon HOM05D006852 ORTHO05D008585 4.7e-61 238.8 295 52.2
FAN10G4066 Fragaria x ananassa HOM05D006852 ORTHO05D008585 6.1e-61 238.4 152 75.7
unitig_747.g22049 Utricularia gibba HOM05D006852 ORTHO05D008585 1.0e-60 237.7 164 70.7
FAN01G0182 Fragaria x ananassa HOM05D006852 ORTHO05D008585 2.3e-60 236.5 151 75.5
BraA01t02166Z Brassica rapa HOM05D006852 ORTHO05D008585 1.3e-58 230.7 294 47.6
Sabra16G0163300 Salix brachista HOM05D006852 ORTHO05D008585 4.1e-57 225.7 191 61.8
Os11g0639000 Oryza sativa ssp. japonica HOM05D006852 ORTHO05D008585 1.6e-56 223.8 151 71.5
Ah.10g038820 Amaranthus hybridus HOM05D006852 ORTHO05D008585 5.9e-56 221.9 192 61.5
AUR62009387 Chenopodium quinoa HOM05D006852 ORTHO05D008585 4.2e-54 215.7 178 63.5
Cc02_g28030 Coffea canephora HOM05D006852 ORTHO05D008585 9.4e-54 214.5 118 84.7
AagrBONN_evm.TU.Sc2ySwM_228.2602 Anthoceros agrestis HOM05D006852 ORTHO05D008585 2.7e-53 213.0 165 62.4
SGA_v2.0_scaffold161G37817 Striga asiatica HOM05D006852 ORTHO05D008585 1.4e-52 210.7 172 64.5
VMungo1127G1814 Vigna mungo HOM05D006852 ORTHO05D008585 1.4e-52 210.7 118 82.2
Mapoly0009s0102 Marchantia polymorpha HOM05D006852 ORTHO05D008585 6.8e-52 208.4 162 62.3
TPR.G1866 Trifolium pratense HOM05D006852 ORTHO05D008585 2.6e-51 206.5 119 80.7
TAR633G0701 Trochodendron aralioides HOM05D006852 ORTHO05D008585 1.1e-49 201.1 118 79.7
Pp3c2_10540 Physcomitrium patens HOM05D006852 ORTHO05D008585 1.4e-49 200.7 169 60.4
MBI04_g36071_MAGBIO Magnolia biondii HOM05D006852 ORTHO05D008585 4.5e-48 195.7 151 68.2
Hund18974 Selenicereus undatus HOM05D006852 ORTHO05D008585 1.7e-47 193.7 262 44.3
CSS0019030 Camellia sinensis var. sinensis HOM05D006852 ORTHO05D008585 2.5e-46 189.9 169 59.8
CSS0037243 Camellia sinensis var. sinensis HOM05D006852 ORTHO05D008585 2.5e-46 189.9 169 59.8
arahy.Tifrunner.gnm1.ann1.2WG9D2 Arachis hypogaea HOM05D006852 ORTHO05D008585 4.7e-45 185.7 340 36.2
Hma1.2p1_0293F.1_g116050 Hydrangea macrophylla HOM05D006852 ORTHO05D008585 2.6e-43 179.9 107 78.5
Haze_03202 Corylus avellana HOM05D006852 ORTHO05D008585 3.7e-42 176.0 136 67.6
Cre07.g336250 Chlamydomonas reinhardtii HOM05D006852 ORTHO05D008585 1.1e-41 174.5 175 52.6
SalBow6G3774 Salvia bowleyana HOM05D006852 ORTHO05D008585 5.9e-40 168.7 113 72.6
GSVIVG01032100001 Vitis vinifera HOM05D006852 ORTHO05D008585 5.9e-40 168.7 102 79.4
SalBow6G4338 Salvia bowleyana HOM05D006852 ORTHO05D008585 1.0e-36 157.9 137 59.1
Oeu049501.1 Olea europaea HOM05D006852 ORTHO05D008585 2.2e-34 150.2 97 77.3
CBR_g4609 Chara braunii HOM05D006852 ORTHO05D008585 6.4e-34 148.7 118 60.2
SMO239G0058 Selaginella moellendorffii HOM05D006852 ORTHO05D008585 2.4e-33 146.7 99 69.7
CDE02G4017 Ceratophyllum demersum HOM05D006852 ORTHO05D008585 1.9e-30 137.1 80 80.0
Migut.N01601 Erythranthe guttata HOM05D006852 ORTHO05D008585 6.8e-28 128.6 83 74.7
MD02G1310300 Malus domestica HOM05D006852 ORTHO05D008585 3.9e-23 112.8 119 52.9
QL11p002033 Quercus lobata HOM05D006852 ORTHO05D008585 3.6e-21 106.3 107 52.3
QL11p002055 Quercus lobata HOM05D006852 ORTHO05D008585 4.1e-17 92.8 99 49.5
QL11p001483 Quercus lobata HOM05D000005 ORTHO05D000012 3.5e-16 89.7 112 44.6
C03p92530 Brassica napus HOM05D006852 ORTHO05D008585 1.2e-11 74.7 59 62.7
Cc02_g28050 Coffea canephora HOM05D006852 ORTHO05D008585 7.1e-09 65.5 37 81.1
Migut.N01602 Erythranthe guttata HOM05D006852 ORTHO05D008585 8.6e-07 58.5 33 78.8
CDE02G1038 Ceratophyllum demersum HOM05D005011 ORTHO05D006443 1.1e-06 58.2 37 70.3
Ca_23889_v3 Cicer arietinum L. HOM05D006852 ORTHO05D008585 7.3e-06 55.5 29 86.2


User provided reference genes

Program Settings