Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI04027 Sapria himalayana HOM05D005105 ORTHO05D006244 0.0e+00 1153.7 584 100.0
TWI34G1796 Tripterygium wilfordii HOM05D005105 ORTHO05D006244 2.6e-160 569.7 612 52.3
Manes.04G087600 Manihot esculenta HOM05D005105 ORTHO05D006244 3.4e-160 569.3 620 51.8
Ciclev10014761m.g Citrus clementina HOM05D005105 ORTHO05D006244 7.5e-160 568.2 543 55.8
Potri.001G325500 Populus trichocarpa HOM05D005105 ORTHO05D006244 1.0e-156 557.8 610 52.5
TWI60G0613 Tripterygium wilfordii HOM05D005105 ORTHO05D006244 8.6e-156 554.7 610 51.3
Thecc.04G041900 Theobroma cacao HOM05D005105 ORTHO05D006244 1.5e-155 553.9 613 50.7
QL02p070577 Quercus lobata HOM05D005105 ORTHO05D006244 2.1e-154 550.1 537 55.3
Duzib147G0369 Durio zibethinus HOM05D005105 ORTHO05D006244 6.2e-154 548.5 602 51.0
RcHm_v2.0_Chr2g0176111 Rosa chinensis HOM05D005105 ORTHO05D006244 5.2e-153 545.4 529 54.6
Prupe.3G310100 Prunus persica HOM05D005105 ORTHO05D006244 3.4e-152 542.7 538 53.5
Cc07_g01060 Coffea canephora HOM05D005105 ORTHO05D006244 5.8e-152 542.0 544 53.9
Glyma.16G052500 Glycine max HOM05D005105 ORTHO05D006244 1.3e-151 540.8 546 54.0
FAN09G0463 Fragaria x ananassa HOM05D005105 ORTHO05D006244 1.7e-151 540.4 542 54.1
Gorai.006G044700 Gossypium raimondii HOM05D005105 ORTHO05D006244 1.7e-151 540.4 643 47.4
FAN05G2765 Fragaria x ananassa HOM05D005105 ORTHO05D006244 2.9e-151 539.7 535 55.3
Lalb_Chr00c40g0412501 Lupinus albus HOM05D005105 ORTHO05D006244 3.7e-151 539.3 537 54.2
arahy.Tifrunner.gnm1.ann1.JMV5LB Arachis hypogaea HOM05D005105 ORTHO05D006244 1.9e-150 537.0 537 53.8
FAN14G3030 Fragaria x ananassa HOM05D005105 ORTHO05D006244 1.9e-150 537.0 600 50.8
GSVIVG01033038001 Vitis vinifera HOM05D005105 ORTHO05D006244 4.1e-150 535.8 552 54.0
MD09G1007000 Malus domestica HOM05D005105 ORTHO05D006244 5.4e-150 535.4 624 50.0
Solyc02g082210.4 Solanum lycopersicum HOM05D005105 ORTHO05D006244 7.1e-150 535.0 603 49.4
Lj1g0026609 Lotus japonicus HOM05D005105 ORTHO05D006244 9.2e-150 534.6 539 53.6
FAN02G1943 Fragaria x ananassa HOM05D005105 ORTHO05D006244 1.2e-149 534.3 542 53.5
CANSAT21G1015 Cannabis sativa HOM05D005105 ORTHO05D006244 1.6e-149 533.9 607 49.1
SalBow4G0131 Salvia bowleyana HOM05D005105 ORTHO05D006244 1.6e-149 533.9 539 53.2
MELO3C025087.2 Cucumis melo HOM05D005105 ORTHO05D006244 4.6e-149 532.3 560 52.5
ClCG01G008700 Citrullus lanatus HOM05D005105 ORTHO05D006244 6.0e-149 531.9 552 52.7
Nn3g16360 Nelumbo nucifera HOM05D005105 ORTHO05D006244 6.0e-149 531.9 623 49.0
Gorai.001G274700 Gossypium raimondii HOM05D005105 ORTHO05D006244 3.0e-148 529.6 617 48.8
Gohir.D07G238700 Gossypium hirsutum HOM05D005105 ORTHO05D006244 3.9e-148 529.3 617 48.6
PGR142G1816 Punica granatum HOM05D005105 ORTHO05D006244 3.9e-148 529.3 609 49.1
CsaV3_5G024330 Cucumis sativus L. HOM05D005105 ORTHO05D006244 5.1e-148 528.9 547 52.7
Migut.F00035 Erythranthe guttata HOM05D005105 ORTHO05D006244 5.1e-148 528.9 610 48.2
Gohir.A07G231500 Gossypium hirsutum HOM05D005105 ORTHO05D006244 3.3e-147 526.2 622 47.9
Ca_07318_v3 Cicer arietinum L. HOM05D005105 ORTHO05D006244 9.5e-147 524.6 538 52.8
Lj2g0026571 Lotus japonicus HOM05D005105 ORTHO05D006244 2.8e-146 523.1 538 53.7
Nitab4.5_0011381g0040 Nicotiana tabacum HOM05D005105 ORTHO05D006244 4.7e-146 522.3 600 49.0
CiPaw.03G004800 Carya illinoinensis HOM05D005105 ORTHO05D006244 1.4e-145 520.8 528 54.2
TAR629G0447 Trochodendron aralioides HOM05D005105 ORTHO05D006244 1.4e-145 520.8 538 52.4
Medtr7g026520 Medicago truncatula HOM05D005105 ORTHO05D006244 1.8e-145 520.4 539 52.5
Phvul.001G090000 Phaseolus vulgaris HOM05D005105 ORTHO05D006244 5.2e-145 518.8 537 53.1
Sed0022814 Sechium edule HOM05D005105 ORTHO05D006244 6.8e-145 518.5 553 51.5
arahy.Tifrunner.gnm1.ann1.B1CDD0 Arachis hypogaea HOM05D005105 ORTHO05D006244 1.2e-144 517.7 530 52.3
Oeu020395.1 Olea europaea HOM05D005105 ORTHO05D006244 1.2e-144 517.7 605 49.6
Cfa007197 Carpinus fangiana HOM05D005105 ORTHO05D006244 9.9e-144 514.6 534 53.0
Psat3g181600 Pisum sativum HOM05D005105 ORTHO05D006244 9.9e-144 514.6 543 52.9
Haze_14911 Corylus avellana HOM05D005105 ORTHO05D006244 2.9e-143 513.1 524 52.9
VMungo1383G1917 Vigna mungo HOM05D005105 ORTHO05D006244 7.1e-142 508.4 536 51.9
Aqoxy5G03244_Aqoxy5G03245 Aquilegia oxysepala HOM05D005105 ORTHO05D006244 1.2e-141 507.7 609 47.9
HanXRQChr17g0551611 Helianthus annuus HOM05D005105 ORTHO05D006244 1.2e-141 507.7 600 47.5
Atru.chr6.2614 Acer truncatum HOM05D005105 ORTHO05D006244 3.5e-141 506.1 589 50.3
Lj7A613T64 Lonicera japonica HOM05D005105 ORTHO05D006244 3.5e-141 506.1 640 46.7
THA.LOC104825638 Tarenaya hassleriana HOM05D005105 ORTHO05D006244 3.5e-141 506.1 609 46.6
AUR62003394 Chenopodium quinoa HOM05D005105 ORTHO05D006244 2.5e-139 500.0 533 52.0
DCAR_015209 Daucus carota HOM05D005105 ORTHO05D006244 2.8e-138 496.5 545 49.5
AT3G26950 Arabidopsis thaliana HOM05D005105 ORTHO05D006244 4.0e-137 492.7 608 46.2
Rhsim08G0041000 Rhododendron simsii HOM05D005105 ORTHO05D006244 6.8e-137 491.9 543 50.5
Sc09g0007730 Simmondsia chinensis HOM05D005105 ORTHO05D006244 8.9e-137 491.5 534 51.3
EL10Ac6g15451 Beta vulgaris HOM05D005105 ORTHO05D006244 2.0e-136 490.3 559 49.9
Lsat_1_v5_gn_0_23961 Lactuca sativa HOM05D005105 ORTHO05D006244 2.6e-136 490.0 539 49.4
Thhalv10003939m.g Eutrema salsugineum HOM05D005105 ORTHO05D006244 5.8e-136 488.8 538 49.8
AL5G15980 Arabidopsis lyrata HOM05D005105 ORTHO05D006244 1.3e-135 487.6 608 45.9
VMungo0464G0185 Vigna mungo HOM05D005105 ORTHO05D006244 1.7e-135 487.3 526 51.9
PSO478G4366 Papaver somniferum HOM05D005105 ORTHO05D006244 6.4e-135 485.3 597 47.7
C07p36060 Brassica napus HOM05D005105 ORTHO05D006244 1.1e-134 484.6 577 47.0
PSO017G6125 Papaver somniferum HOM05D005105 ORTHO05D006244 1.4e-134 484.2 602 47.5
Glyma.16G146100 Glycine max HOM05D005105 ORTHO05D006244 1.9e-134 483.8 607 46.8
Carub.0005s0514 Capsella rubella HOM05D005105 ORTHO05D006244 2.4e-134 483.4 602 45.3
GSVIVG01008594001 Vitis vinifera HOM05D005105 ORTHO05D006244 2.4e-134 483.4 568 49.1
ECA246G4542 Erigeron canadensis HOM05D005105 ORTHO05D006244 5.4e-134 482.3 602 45.8
Sp2g16080 Schrenkiella parvula HOM05D005105 ORTHO05D006244 7.1e-134 481.9 612 45.4
vmacro19146 Vaccinium macrocarpon HOM05D005105 ORTHO05D006244 1.7e-132 477.2 658 44.7
Nitab4.5_0011717g0030 Nicotiana tabacum HOM05D005105 ORTHO05D006244 2.3e-132 476.9 612 44.8
Sabra16G0208000 Salix brachista HOM05D005105 ORTHO05D006244 2.3e-132 476.9 590 47.1
THA.LOC104805319 Tarenaya hassleriana HOM05D005105 ORTHO05D006244 1.1e-131 474.6 618 44.3
BcaC06g31032 Brassica carinata HOM05D005105 ORTHO05D006244 5.6e-131 472.2 609 45.8
BraA06t27085Z Brassica rapa HOM05D005105 ORTHO05D006244 1.6e-130 470.7 589 46.0
AUR62029433 Chenopodium quinoa HOM05D005105 ORTHO05D006244 3.6e-130 469.5 536 49.4
vmacro18364 Vaccinium macrocarpon HOM05D005105 ORTHO05D006244 1.4e-129 467.6 483 52.4
ATR0582G106 Amborella trichopoda HOM05D005105 ORTHO05D006244 4.4e-128 462.6 540 47.8
HanXRQChr05g0155591 Helianthus annuus HOM05D005105 ORTHO05D006244 3.8e-127 459.5 612 44.0
Os11g0507400 Oryza sativa ssp. japonica HOM05D005105 ORTHO05D006244 6.4e-127 458.8 541 47.3
DCAR_007509 Daucus carota HOM05D005105 ORTHO05D006244 1.9e-126 457.2 605 43.5
BcaC06g33873 Brassica carinata HOM05D005105 ORTHO05D006244 1.2e-125 454.5 577 45.2
Duzib264G1310 Durio zibethinus HOM05D005105 ORTHO05D006244 4.6e-125 452.6 576 46.5
BolC7t44120H Brassica oleracea HOM05D005105 ORTHO05D006244 1.3e-124 451.1 577 45.1
Phvul.004G070700 Phaseolus vulgaris HOM05D005105 ORTHO05D006244 2.3e-124 450.3 537 47.9
Actinidia36228 Actinidia chinensis HOM05D005105 ORTHO05D006244 2.5e-123 446.8 555 47.4
CDE06G1277 Ceratophyllum demersum HOM05D005105 ORTHO05D006244 2.8e-122 443.4 545 47.0
A06p41600 Brassica napus HOM05D005105 ORTHO05D006244 1.4e-121 441.0 577 44.0
Aa31LG2G5630 Aethionema arabicum HOM05D005105 ORTHO05D006244 6.4e-119 432.2 583 42.5
FvH4_6g53950 Fragaria vesca HOM05D005105 ORTHO05D006244 1.4e-118 431.0 384 57.0
Lsat_1_v5_gn_5_10960 Lactuca sativa HOM05D005105 ORTHO05D006244 5.4e-118 429.1 519 47.6
Atru.chr6.2613 Acer truncatum HOM05D005105 ORTHO05D006244 7.1e-118 428.7 374 58.6
unitig_0.g1913 Utricularia gibba HOM05D005105 ORTHO05D006244 1.5e-115 421.0 449 51.9
Peaxi162Scf00331g00014 Petunia axillaris HOM05D005105 ORTHO05D006244 9.6e-115 418.3 523 47.2
COL.COLO4_13307 Corchorus olitorius HOM05D005105 ORTHO05D006244 9.0e-113 411.8 570 43.0
Dinv33309 Davidia involucrata HOM05D005105 ORTHO05D006244 3.2e-110 403.3 409 54.3
Prupe.3G297400 Prunus persica HOM05D005105 ORTHO05D006244 1.6e-109 401.0 579 42.5
Eucgr.I01623 Eucalyptus grandis HOM05D005105 ORTHO05D006244 6.0e-109 399.1 373 54.7
CARHR148130 Cardamine hirsuta HOM05D005105 ORTHO05D006244 1.5e-107 394.4 394 52.0
Hma1.2p1_0093F.1_g046930 Hydrangea macrophylla HOM05D005105 ORTHO05D006244 1.9e-107 394.0 397 52.6
Gohir.A09G038300 Gossypium hirsutum HOM05D005105 ORTHO05D006244 2.5e-107 393.7 507 46.0
Cpa.g.sc70.110 Carica papaya HOM05D005105 ORTHO05D006244 4.1e-105 386.3 497 46.3
Sopen02g026870 Solanum pennellii HOM05D005105 ORTHO05D006244 1.1e-102 378.3 327 58.1
PGSC0003DMG400013660 Solanum tuberosum HOM05D005105 ORTHO05D006244 5.5e-102 375.9 327 56.9
CSS0029044 Camellia sinensis var. sinensis HOM05D005105 ORTHO05D006244 9.3e-102 375.2 335 55.5
MD17G1010700 Malus domestica HOM05D005105 ORTHO05D006244 2.1e-101 374.0 373 53.9
Lj5A92G44 Lonicera japonica HOM05D005105 ORTHO05D006244 1.5e-99 367.9 336 55.4
HPP92_009891 Vanilla planifolia HOM05D005105 ORTHO05D006244 6.9e-97 359.0 336 54.5
CSS0048130 Camellia sinensis var. sinensis HOM05D005105 ORTHO05D006244 4.2e-94 349.7 373 49.9
SMO180G0002 Selaginella moellendorffii HOM05D005105 ORTHO05D006244 1.7e-90 337.8 485 40.0
Pp3c1_35010 Physcomitrium patens HOM05D005105 ORTHO05D006244 2.6e-83 313.9 576 34.9
Pp3c21_14570 Physcomitrium patens HOM05D005105 ORTHO05D006244 1.7e-82 311.2 544 37.3
Actinidia18328 Actinidia chinensis HOM05D005105 ORTHO05D006244 1.1e-78 298.5 281 55.9
Dinv23187 Davidia involucrata HOM05D005105 ORTHO05D006244 3.6e-77 293.5 274 56.6
ECA246G1012 Erigeron canadensis HOM05D005105 ORTHO05D006244 4.7e-77 293.1 464 40.9
TWI34G0688 Tripterygium wilfordii HOM05D005105 ORTHO05D006244 3.0e-76 290.4 247 58.3
Glyma.02G065000 Glycine max HOM05D005105 ORTHO05D006244 7.0e-65 252.7 395 42.3
CDE05G2066 Ceratophyllum demersum HOM05D005105 ORTHO05D006244 1.7e-55 221.5 146 71.9
THA.LOC104813335 Tarenaya hassleriana HOM05D005105 ORTHO05D006244 2.8e-53 214.2 271 46.1
PSO063G6475 Papaver somniferum HOM05D005105 ORTHO05D006244 2.3e-52 211.1 333 42.3
Actinidia25549 Actinidia chinensis HOM05D005105 ORTHO05D006244 1.8e-49 201.4 132 72.7
AagrBONN_evm.TU.Sc2ySwM_340.35 Anthoceros agrestis HOM05D005105 ORTHO05D006244 8.6e-47 192.6 546 28.2
HPP92_009881 Vanilla planifolia HOM05D005105 ORTHO05D006244 1.9e-38 164.9 246 41.5
Gohir.D09G039750 Gossypium hirsutum HOM05D005105 ORTHO05D006244 2.2e-34 151.4 160 51.2
Actinidia18329 Actinidia chinensis HOM05D005105 ORTHO05D006244 9.2e-33 146.0 261 38.7
Gohir.D09G039801 Gossypium hirsutum HOM05D005105 ORTHO05D006244 1.1e-28 132.5 209 39.2
SGA_v2.0_scaffold253G45172 Striga asiatica HOM05D005105 ORTHO05D006244 2.3e-28 131.3 191 44.5
HPP92_009897 Vanilla planifolia HOM05D005105 ORTHO05D006244 2.3e-28 131.3 177 44.1
FAN05G0264 Fragaria x ananassa HOM05D005105 ORTHO05D006244 1.2e-27 129.0 185 43.2
Atru.chr6.2612 Acer truncatum HOM05D005105 ORTHO05D006244 2.9e-26 124.4 184 46.2
Glyma.19G097001 Glycine max HOM05D005105 ORTHO05D006244 2.9e-26 124.4 112 61.6
Dinv23186 Davidia involucrata HOM05D005105 ORTHO05D006244 4.1e-25 120.6 182 45.1
Ah.03g148260 Amaranthus hybridus HOM05D005105 ORTHO05D006244 4.6e-24 117.1 114 57.0
Actinidia05877 Actinidia chinensis HOM05D000139 ORTHO05D000103 7.8e-24 116.3 215 36.7
Glyma.19G097101 Glycine max HOM05D005105 ORTHO05D006244 3.3e-22 110.9 83 63.9
Lj5A92G45 Lonicera japonica HOM05D005105 ORTHO05D006244 3.8e-18 97.4 159 39.0
Dinv33310 Davidia involucrata HOM05D005105 ORTHO05D006244 5.6e-14 83.6 160 37.5
CBR_g57654 Chara braunii HOM05D000004 ORTHO05D000002 9.6e-14 82.8 159 30.8


User provided reference genes

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