Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI04020 Sapria himalayana HOM05D032317 ORTHO05D367338 2.4e-43 178.3 82 100.0
SHI16238 Sapria himalayana HOM05D000002 ORTHO05D000001 4.0e-11 71.2 51 58.8
SHI03695 Sapria himalayana HOM05D000002 ORTHO05D016221 1.0e-09 66.6 53 56.6
ClCG03G011770 Citrullus lanatus HOM05D000002 ORTHO05D015610 3.2e-08 61.6 81 37.0
ECA233G0393 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.5e-08 60.8 65 47.7
ECA234G1272 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.5e-08 60.8 65 47.7
ECA234G3286 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.5e-08 60.8 65 47.7
Lalb_Chr17g0347791 Lupinus albus HOM05D000002 ORTHO05D000001 5.5e-08 60.8 54 53.7
PSO339G2610 Papaver somniferum HOM05D000002 ORTHO05D000001 5.5e-08 60.8 81 39.5
PSO170G0440 Papaver somniferum HOM05D000002 ORTHO05D000001 7.1e-08 60.5 81 40.7
TWI14G0175 Tripterygium wilfordii HOM05D000002 ORTHO05D000001 7.1e-08 60.5 57 49.1
TWI38G2115 Tripterygium wilfordii HOM05D000002 ORTHO05D000001 7.1e-08 60.5 57 49.1
TWI12G0064 Tripterygium wilfordii HOM05D000002 ORTHO05D000001 9.3e-08 60.1 55 50.9
TWI12G1222 Tripterygium wilfordii HOM05D000002 ORTHO05D000001 9.3e-08 60.1 55 50.9
TWI53G1218 Tripterygium wilfordii HOM05D000002 ORTHO05D000001 9.3e-08 60.1 55 50.9
TWI81G0534 Tripterygium wilfordii HOM05D000002 ORTHO05D000001 9.3e-08 60.1 55 50.9
CSS0010794 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.1e-07 58.9 63 47.6
SHI11549 Sapria himalayana HOM05D000002 ORTHO05D000001 2.7e-07 58.5 54 51.9
SHI16498 Sapria himalayana HOM05D000002 ORTHO05D000001 2.7e-07 58.5 54 51.9
TWI81G1064 Tripterygium wilfordii HOM05D000002 ORTHO05D000001 2.7e-07 58.5 55 50.9
PSO675G2988 Papaver somniferum HOM05D000002 ORTHO05D000001 3.5e-07 58.2 60 45.0
PSO675G6068 Papaver somniferum HOM05D000002 ORTHO05D000001 3.5e-07 58.2 79 38.0
PSO765G0122 Papaver somniferum HOM05D000002 ORTHO05D000001 3.5e-07 58.2 79 38.0
PSO832G2292 Papaver somniferum HOM05D000002 ORTHO05D000001 3.5e-07 58.2 81 38.3
SHI15740 Sapria himalayana HOM05D000002 ORTHO05D000001 3.5e-07 58.2 54 51.9
ECA233G3353 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.6e-07 57.8 65 46.2
ECA238G3088 Erigeron canadensis HOM05D000006 ORTHO05D000001 4.6e-07 57.8 65 46.2
ECA232G0240 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.1e-07 57.4 65 46.2
SHI36896 Sapria himalayana HOM05D000002 ORTHO05D000001 6.1e-07 57.4 54 50.0
CSS0046298 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004756 7.9e-07 57.0 55 43.6
ECA232G1228 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.9e-07 57.0 65 46.2
ECA246G1084 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.9e-07 57.0 64 42.2
SHI02490 Sapria himalayana HOM05D000002 ORTHO05D000001 7.9e-07 57.0 54 50.0
SHI02528 Sapria himalayana HOM05D000002 ORTHO05D000001 7.9e-07 57.0 54 50.0
SHI06223 Sapria himalayana HOM05D000002 ORTHO05D000001 7.9e-07 57.0 54 50.0
SHI07621 Sapria himalayana HOM05D000002 ORTHO05D000001 7.9e-07 57.0 54 50.0
SHI09400 Sapria himalayana HOM05D000002 ORTHO05D000001 7.9e-07 57.0 54 50.0
SHI09533 Sapria himalayana HOM05D032317 ORTHO05D370615 7.9e-07 57.0 52 50.0
SHI11693 Sapria himalayana HOM05D000002 ORTHO05D000001 7.9e-07 57.0 54 50.0
SHI18716 Sapria himalayana HOM05D000002 ORTHO05D000001 7.9e-07 57.0 54 50.0
SHI20212 Sapria himalayana HOM05D000002 ORTHO05D000001 7.9e-07 57.0 54 50.0
SHI24644 Sapria himalayana HOM05D000002 ORTHO05D000001 7.9e-07 57.0 54 50.0
SHI31374 Sapria himalayana HOM05D000002 ORTHO05D000001 7.9e-07 57.0 54 50.0
SHI35024 Sapria himalayana HOM05D000002 ORTHO05D000001 7.9e-07 57.0 54 50.0
SHI39742 Sapria himalayana HOM05D000002 ORTHO05D000001 7.9e-07 57.0 54 48.1
SHI44660 Sapria himalayana HOM05D000002 ORTHO05D000001 7.9e-07 57.0 54 50.0
SHI53716 Sapria himalayana HOM05D000002 ORTHO05D000001 7.9e-07 57.0 54 50.0
SHI54737 Sapria himalayana HOM05D000002 ORTHO05D000001 7.9e-07 57.0 54 50.0
QL11p048818 Quercus lobata HOM05D000002 ORTHO05D000001 1.0e-06 56.6 54 46.3
SHI17243 Sapria himalayana HOM05D000002 ORTHO05D000001 1.0e-06 56.6 54 50.0
SHI31302 Sapria himalayana HOM05D000002 ORTHO05D000001 1.0e-06 56.6 54 50.0
SHI32448 Sapria himalayana HOM05D000002 ORTHO05D000001 1.0e-06 56.6 54 50.0
SHI50464 Sapria himalayana HOM05D000002 ORTHO05D000001 1.0e-06 56.6 54 50.0
TPR.G28771 Trifolium pratense HOM05D000002 ORTHO05D000001 1.0e-06 56.6 54 50.0
CSS0013767 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.3e-06 56.2 58 39.7
CSS0017883 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.3e-06 56.2 63 46.0
ECA240G2100 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.3e-06 56.2 65 44.6
ECA247G4143 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.3e-06 56.2 65 46.2
PSO079G0032 Papaver somniferum HOM05D000002 ORTHO05D000001 1.3e-06 56.2 79 35.4
PSO455G0178 Papaver somniferum HOM05D000002 ORTHO05D000001 1.3e-06 56.2 80 40.0
QL01p026368 Quercus lobata HOM05D000002 ORTHO05D000001 1.3e-06 56.2 54 46.3
QL04p089373 Quercus lobata HOM05D000002 ORTHO05D000001 1.3e-06 56.2 54 46.3
QL05p073015 Quercus lobata HOM05D000002 ORTHO05D000001 1.3e-06 56.2 54 46.3
QL06p036226 Quercus lobata HOM05D000002 ORTHO05D000001 1.3e-06 56.2 54 46.3
QL07p048797 Quercus lobata HOM05D000002 ORTHO05D000001 1.3e-06 56.2 54 46.3
QL11p002299 Quercus lobata HOM05D000002 ORTHO05D000001 1.3e-06 56.2 54 46.3
SHI05604 Sapria himalayana HOM05D000002 ORTHO05D000001 1.3e-06 56.2 54 50.0
SHI26639 Sapria himalayana HOM05D000002 ORTHO05D000001 1.3e-06 56.2 54 48.1
SHI28040 Sapria himalayana HOM05D000002 ORTHO05D000001 1.3e-06 56.2 54 48.1
CSS0040737 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.8e-06 55.8 54 44.4
CSS0049957 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.8e-06 55.8 58 39.7
CAN.G267.10 Capsicum annuum HOM05D000002 ORTHO05D000001 1.8e-06 55.8 54 44.4
ECA232G0091 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.8e-06 55.8 53 47.2
ECA232G2811 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.8e-06 55.8 65 46.2
PSO675G1073 Papaver somniferum HOM05D000002 ORTHO05D000001 1.8e-06 55.8 76 40.8
TPR.G20034 Trifolium pratense HOM05D000002 ORTHO05D000001 1.8e-06 55.8 53 49.1
ECA232G1725 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.3e-06 55.5 65 44.6
ECA246G3157 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.3e-06 55.5 65 44.6
PSO724G0488 Papaver somniferum HOM05D000002 ORTHO05D000001 2.3e-06 55.5 54 50.0
QL02p084387 Quercus lobata HOM05D000002 ORTHO05D000001 2.3e-06 55.5 54 46.3
QL03p000720 Quercus lobata HOM05D000002 ORTHO05D000001 2.3e-06 55.5 54 46.3
SHI02112 Sapria himalayana HOM05D000002 ORTHO05D000001 2.3e-06 55.5 54 48.1
SHI31891 Sapria himalayana HOM05D000002 ORTHO05D000001 2.3e-06 55.5 54 48.1
CSS0000858 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.0e-06 55.1 63 44.4
CSS0007796 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.0e-06 55.1 63 44.4
CSS0010335 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 3.0e-06 55.1 63 44.4
CSS0021782 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.0e-06 55.1 58 39.7
CSS0022055 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.0e-06 55.1 63 44.4
CSS0022698 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.0e-06 55.1 55 43.6
CSS0027817 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.0e-06 55.1 63 44.4
CSS0029482 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.0e-06 55.1 63 44.4
CSS0033236 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.0e-06 55.1 63 44.4
CSS0036773 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.0e-06 55.1 73 39.7
CSS0037461 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.0e-06 55.1 63 44.4
CSS0038170 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.0e-06 55.1 63 44.4
CSS0050489 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.0e-06 55.1 55 43.6
ECA240G2438 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.0e-06 55.1 65 46.2
RcHm_v2.0_Chr4g0430811 Rosa chinensis HOM05D000002 ORTHO05D000001 3.0e-06 55.1 55 43.6
SHI00046 Sapria himalayana HOM05D000002 ORTHO05D000001 3.0e-06 55.1 54 48.1
SHI00047 Sapria himalayana HOM05D000002 ORTHO05D000001 3.0e-06 55.1 54 48.1
SHI41656 Sapria himalayana HOM05D000002 ORTHO05D000001 3.0e-06 55.1 54 48.1
SHI47374 Sapria himalayana HOM05D000002 ORTHO05D000001 3.0e-06 55.1 54 50.0
SHI50456 Sapria himalayana HOM05D000002 ORTHO05D000001 3.0e-06 55.1 54 48.1
SEGI_01318 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 3.0e-06 55.1 64 42.2
CSS0000519 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.9e-06 54.7 63 44.4
ECA233G1159 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.9e-06 54.7 54 50.0
ECA233G5604 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.9e-06 54.7 54 50.0
ECA238G0444 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.9e-06 54.7 54 50.0
ECA238G0623 Erigeron canadensis HOM05D000107 ORTHO05D000001 3.9e-06 54.7 66 42.4
ECA238G1904 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.9e-06 54.7 54 50.0
ECA238G2442 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.9e-06 54.7 54 50.0
ECA240G1047 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.9e-06 54.7 54 50.0
ECA240G4438 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.9e-06 54.7 54 50.0
ECA246G1285 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.9e-06 54.7 54 50.0
ECA247G3312 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.9e-06 54.7 64 40.6
ECA248G0752 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.9e-06 54.7 75 40.0
PSO210G0676 Papaver somniferum HOM05D000002 ORTHO05D000001 3.9e-06 54.7 49 51.0
TPR.G31083 Trifolium pratense HOM05D000002 ORTHO05D000001 3.9e-06 54.7 57 47.4
CSS0015301 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.1e-06 54.3 57 45.6
ECA247G2983 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.1e-06 54.3 65 44.6
MD07G1013900 Malus domestica HOM05D000002 ORTHO05D000001 5.1e-06 54.3 66 40.9
PSO017G6462 Papaver somniferum HOM05D000002 ORTHO05D000001 5.1e-06 54.3 60 46.7
PSO210G7339 Papaver somniferum HOM05D000002 ORTHO05D000001 5.1e-06 54.3 77 36.4
SHI02052 Sapria himalayana HOM05D032317 ORTHO05D365237 5.1e-06 54.3 49 51.0
SHI05008 Sapria himalayana HOM05D000002 ORTHO05D000001 5.1e-06 54.3 54 50.0
SHI11999 Sapria himalayana HOM05D000002 ORTHO05D000001 5.1e-06 54.3 54 48.1
TPR.G17869 Trifolium pratense HOM05D000002 ORTHO05D000001 5.1e-06 54.3 57 42.1
TPR.G40541 Trifolium pratense HOM05D000002 ORTHO05D000001 5.1e-06 54.3 54 48.1
Ca_25006_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 6.7e-06 53.9 52 50.0
ECA232G0554 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.7e-06 53.9 65 44.6
ECA232G2882 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.7e-06 53.9 65 44.6
ECA236G2782 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.7e-06 53.9 65 44.6
ECA240G1012 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.7e-06 53.9 65 44.6
ECA246G0527 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.7e-06 53.9 65 44.6
FvH4_7g04041 Fragaria vesca HOM05D000002 ORTHO05D000001 6.7e-06 53.9 55 43.6
RcHm_v2.0_Chr4g0404531 Rosa chinensis HOM05D000002 ORTHO05D000001 6.7e-06 53.9 55 41.8
RcHm_v2.0_Chr5g0078371 Rosa chinensis HOM05D000002 ORTHO05D000001 6.7e-06 53.9 55 41.8
Sopen01g023100 Solanum pennellii HOM05D000002 ORTHO05D000001 6.7e-06 53.9 54 50.0
Sopen01g031800 Solanum pennellii HOM05D000002 ORTHO05D000001 6.7e-06 53.9 54 50.0
Sopen05g006170 Solanum pennellii HOM05D000002 ORTHO05D000001 6.7e-06 53.9 54 50.0
Sopen08g007360 Solanum pennellii HOM05D000002 ORTHO05D000001 6.7e-06 53.9 54 50.0
Sopen09g011150 Solanum pennellii HOM05D000002 ORTHO05D000001 6.7e-06 53.9 54 50.0
Sopen09g015540 Solanum pennellii HOM05D000002 ORTHO05D000001 6.7e-06 53.9 54 50.0
Sopen12g006750 Solanum pennellii HOM05D000002 ORTHO05D000001 6.7e-06 53.9 54 50.0
HPP92_021867 Vanilla planifolia HOM05D000002 ORTHO05D000001 6.7e-06 53.9 57 40.4
ECA236G5016 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.7e-06 53.5 65 44.6
ECA240G3614 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.7e-06 53.5 54 48.1
FvH4_5g29995 Fragaria vesca HOM05D000002 ORTHO05D000001 8.7e-06 53.5 59 44.1
HanXRQChr04g0114611 Helianthus annuus HOM05D000002 ORTHO05D000001 8.7e-06 53.5 54 48.1
PSO339G4972 Papaver somniferum HOM05D000002 ORTHO05D000001 8.7e-06 53.5 57 43.9
PSO675G7278 Papaver somniferum HOM05D000002 ORTHO05D000001 8.7e-06 53.5 65 43.1
QL02p077346 Quercus lobata HOM05D000002 ORTHO05D000001 8.7e-06 53.5 54 46.3
RcHm_v2.0_Chr1g0377711 Rosa chinensis HOM05D000002 ORTHO05D000001 8.7e-06 53.5 55 45.5
RcHm_v2.0_Chr1g0382741 Rosa chinensis HOM05D000002 ORTHO05D000001 8.7e-06 53.5 55 45.5
RcHm_v2.0_Chr2g0154181 Rosa chinensis HOM05D000002 ORTHO05D000001 8.7e-06 53.5 55 45.5
RcHm_v2.0_Chr2g0166821 Rosa chinensis HOM05D000002 ORTHO05D000001 8.7e-06 53.5 55 45.5
RcHm_v2.0_Chr3g0454881 Rosa chinensis HOM05D000002 ORTHO05D000001 8.7e-06 53.5 55 45.5
RcHm_v2.0_Chr3g0463471 Rosa chinensis HOM05D000002 ORTHO05D000001 8.7e-06 53.5 55 45.5
RcHm_v2.0_Chr6g0298961 Rosa chinensis HOM05D000002 ORTHO05D000001 8.7e-06 53.5 55 41.8
SHI40782 Sapria himalayana HOM05D000002 ORTHO05D000001 8.7e-06 53.5 54 48.1
SHI46656 Sapria himalayana HOM05D000002 ORTHO05D000001 8.7e-06 53.5 54 48.1


User provided reference genes

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