Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI03958 Sapria himalayana HOM05D002876 ORTHO05D000106 2.3e-57 225.3 111 100.0
SHI45281 Sapria himalayana HOM05D000176 ORTHO05D000106 6.2e-23 110.9 126 51.6
SHI05518 Sapria himalayana HOM05D002876 ORTHO05D000106 3.4e-13 78.6 114 43.0
SHI17080 Sapria himalayana HOM05D002876 ORTHO05D000106 1.0e-12 77.0 81 48.1
SHI22148 Sapria himalayana HOM05D000176 ORTHO05D000106 8.5e-12 73.9 84 52.4
SHI24795 Sapria himalayana HOM05D002876 ORTHO05D000106 8.5e-12 73.9 120 36.7
SHI07397 Sapria himalayana HOM05D002876 ORTHO05D000106 3.2e-11 72.0 118 39.0
SHI19007 Sapria himalayana HOM05D002876 ORTHO05D000106 2.1e-10 69.3 70 51.4
SHI05275 Sapria himalayana HOM05D001404 ORTHO05D009009 1.4e-09 66.6 70 52.9
SHI09521 Sapria himalayana HOM05D002876 ORTHO05D000106 1.8e-09 66.2 68 51.5
ClCG06G006800 Citrullus lanatus HOM05D000176 ORTHO05D000013 1.1e-08 63.5 119 35.3
SHI15236 Sapria himalayana HOM05D002876 ORTHO05D000106 1.1e-08 63.5 72 45.8
SHI22591 Sapria himalayana HOM05D002876 ORTHO05D000106 2.5e-08 62.4 108 38.9
SHI05005 Sapria himalayana HOM05D002876 ORTHO05D000106 3.3e-08 62.0 70 48.6
SHI26138 Sapria himalayana HOM05D000176 ORTHO05D000106 7.4e-08 60.8 117 37.6
THA.LOC104802612 Tarenaya hassleriana HOM05D000176 ORTHO05D003511 7.4e-08 60.8 119 33.6
AT1G48120 Arabidopsis thaliana HOM05D000176 ORTHO05D003511 2.2e-07 59.3 119 31.9
vmacro21927 Vaccinium macrocarpon HOM05D000176 ORTHO05D000106 2.2e-07 59.3 125 32.8
Thhalv10011184m.g Eutrema salsugineum HOM05D000176 ORTHO05D003511 2.8e-07 58.9 119 32.8
AL1G54690 Arabidopsis lyrata HOM05D000176 ORTHO05D003511 4.8e-07 58.2 119 31.9
Carub.0001s3722 Capsella rubella HOM05D000176 ORTHO05D003511 4.8e-07 58.2 119 31.9
TWI09G0001 Tripterygium wilfordii HOM05D000176 ORTHO05D000106 4.8e-07 58.2 127 32.3
TWI31G0542 Tripterygium wilfordii HOM05D000176 ORTHO05D000106 4.8e-07 58.2 127 32.3
TWI56G0332 Tripterygium wilfordii HOM05D000176 ORTHO05D000106 4.8e-07 58.2 127 32.3
TWI75G1856 Tripterygium wilfordii HOM05D000176 ORTHO05D000106 4.8e-07 58.2 127 32.3
A06p04680 Brassica napus HOM05D000176 ORTHO05D003511 6.3e-07 57.8 119 31.9
BraA06t23671Z Brassica rapa HOM05D000176 ORTHO05D003511 6.3e-07 57.8 119 31.9
Lj4g0008099 Lotus japonicus HOM05D000176 ORTHO05D000106 6.3e-07 57.8 120 35.0
Aa31LG10G5620 Aethionema arabicum HOM05D000176 ORTHO05D003511 8.2e-07 57.4 119 32.8
CARHR037760 Cardamine hirsuta HOM05D000176 ORTHO05D003511 1.1e-06 57.0 119 31.9
Cc07_g21250 Coffea canephora HOM05D000176 ORTHO05D000106 1.1e-06 57.0 124 32.3
C06p02530 Brassica napus HOM05D000176 ORTHO05D003511 1.4e-06 56.6 119 31.1
BolC6t35381H Brassica oleracea HOM05D000176 ORTHO05D003511 1.4e-06 56.6 119 31.1
Cc02_g33570 Coffea canephora HOM05D000176 ORTHO05D000106 1.4e-06 56.6 124 31.5
Cc11_g00680 Coffea canephora HOM05D000176 ORTHO05D000106 1.4e-06 56.6 117 33.3
Rhsim10G0079000 Rhododendron simsii HOM05D000176 ORTHO05D003511 1.4e-06 56.6 121 33.9
Sp1g35090 Schrenkiella parvula HOM05D000176 ORTHO05D003511 1.4e-06 56.6 119 31.9
Cc03_g09280 Coffea canephora HOM05D000176 ORTHO05D000106 1.8e-06 56.2 124 32.3
SHI18678 Sapria himalayana HOM05D002876 ORTHO05D000106 1.8e-06 56.2 111 38.7
arahy.Tifrunner.gnm1.ann1.YRK7UU Arachis hypogaea HOM05D000176 ORTHO05D000106 2.4e-06 55.8 121 31.4
CSS0021846 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 2.4e-06 55.8 131 30.5
Cc02_g29110 Coffea canephora HOM05D000176 ORTHO05D000106 3.1e-06 55.5 124 32.3
CSS0004167 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 4.1e-06 55.1 119 31.9
CSS0010546 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 4.1e-06 55.1 119 31.9
CSS0025783 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 4.1e-06 55.1 123 31.7
CSS0037304 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 4.1e-06 55.1 123 31.7
CSS0043966 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 4.1e-06 55.1 123 31.7
CSS0045961 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 4.1e-06 55.1 123 31.7
CSS0048918 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 4.1e-06 55.1 119 31.9
SHI21406 Sapria himalayana HOM05D002876 ORTHO05D000106 5.3e-06 54.7 103 36.9
CSS0007867 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 6.9e-06 54.3 119 31.9
Cc03_g15950 Coffea canephora HOM05D000176 ORTHO05D003511 6.9e-06 54.3 123 31.7
SHI10958 Sapria himalayana HOM05D002876 ORTHO05D000106 6.9e-06 54.3 78 41.0
CSS0006036 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 9.1e-06 53.9 119 31.9
CSS0006340 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 9.1e-06 53.9 119 31.9
CSS0009485 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 9.1e-06 53.9 119 31.9
CSS0011501 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 9.1e-06 53.9 119 31.9
CSS0024487 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 9.1e-06 53.9 119 31.9
CSS0026564 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 9.1e-06 53.9 119 31.9
CSS0030233 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 9.1e-06 53.9 119 31.9
CSS0036437 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 9.1e-06 53.9 119 31.9
CSS0038560 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 9.1e-06 53.9 119 31.9
CSS0049971 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 9.1e-06 53.9 119 31.9
Cc00_g24290 Coffea canephora HOM05D000176 ORTHO05D000106 9.1e-06 53.9 119 31.9


User provided reference genes

Program Settings