Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI03952 Sapria himalayana HOM05D000849 ORTHO05D003989 3.7e-39 164.5 87 100.0
SHI36761 Sapria himalayana HOM05D010923 ORTHO05D003989 3.8e-15 84.7 53 71.7
SHI20141 Sapria himalayana HOM05D000849 ORTHO05D003989 9.6e-11 70.1 38 78.9
SHI42703 Sapria himalayana HOM05D000849 ORTHO05D003989 9.0e-09 63.5 40 72.5
SHI50198 Sapria himalayana HOM05D000849 ORTHO05D003989 3.4e-08 61.6 39 74.4
SHI51537 Sapria himalayana HOM05D000849 ORTHO05D003989 4.4e-08 61.2 38 71.1
Hma1.2p1_0663F.1_g198540 Hydrangea macrophylla HOM05D000849 ORTHO05D003989 5.8e-08 60.8 79 41.8
SHI06560 Sapria himalayana HOM05D000849 ORTHO05D003989 5.8e-08 60.8 31 80.6
FvH4_1g06580 Fragaria vesca HOM05D000849 ORTHO05D003989 7.6e-08 60.5 72 45.8
FAN19G1758 Fragaria x ananassa HOM05D000849 ORTHO05D003989 7.6e-08 60.5 72 45.8
FAN26G0314 Fragaria x ananassa HOM05D000849 ORTHO05D003989 7.6e-08 60.5 72 45.8
FAN26G0318 Fragaria x ananassa HOM05D000849 ORTHO05D003989 7.6e-08 60.5 72 45.8
FAN28G0398 Fragaria x ananassa HOM05D000849 ORTHO05D003989 9.9e-08 60.1 72 44.4
MD02G1069000 Malus domestica HOM05D000849 ORTHO05D003989 9.9e-08 60.1 72 44.4
RcHm_v2.0_Chr2g0092321 Rosa chinensis HOM05D000849 ORTHO05D003989 9.9e-08 60.1 72 44.4
Prupe.7G216600 Prunus persica HOM05D000849 ORTHO05D003989 1.3e-07 59.7 72 44.4
Actinidia29881 Actinidia chinensis HOM05D000849 ORTHO05D003989 2.2e-07 58.9 72 44.4
Ah.09g230330 Amaranthus hybridus HOM05D000849 ORTHO05D003989 2.2e-07 58.9 72 44.4
EL10Ac8g18347 Beta vulgaris HOM05D000849 ORTHO05D003989 2.2e-07 58.9 72 44.4
CAN.G1058.10 Capsicum annuum HOM05D000849 ORTHO05D003989 2.2e-07 58.9 72 44.4
CiPaw.04G154300 Carya illinoinensis HOM05D000849 ORTHO05D003989 2.2e-07 58.9 72 44.4
ClCG03G015970 Citrullus lanatus HOM05D000849 ORTHO05D003989 2.2e-07 58.9 72 44.4
MELO3C015429.2 Cucumis melo HOM05D000849 ORTHO05D003989 2.2e-07 58.9 72 44.4
CsaV3_1G039990 Cucumis sativus L. HOM05D000849 ORTHO05D003989 2.2e-07 58.9 72 44.4
Dinv42272 Davidia involucrata HOM05D000849 ORTHO05D003989 2.2e-07 58.9 72 44.4
Duzib187G0631 Durio zibethinus HOM05D000849 ORTHO05D003989 2.2e-07 58.9 72 44.4
Gohir.A05G027200 Gossypium hirsutum HOM05D000849 ORTHO05D003989 2.2e-07 58.9 72 44.4
Gohir.A13G194600 Gossypium hirsutum HOM05D000849 ORTHO05D003989 2.2e-07 58.9 72 44.4
Gohir.D05G029100 Gossypium hirsutum HOM05D000849 ORTHO05D003989 2.2e-07 58.9 72 44.4
Gohir.D13G200300 Gossypium hirsutum HOM05D000849 ORTHO05D003989 2.2e-07 58.9 72 44.4
Gorai.009G029200 Gossypium raimondii HOM05D000849 ORTHO05D003989 2.2e-07 58.9 72 44.4
Gorai.013G229100 Gossypium raimondii HOM05D000849 ORTHO05D003989 2.2e-07 58.9 72 44.4
MD15G1200600 Malus domestica HOM05D000849 ORTHO05D003989 2.2e-07 58.9 72 44.4
Peaxi162Scf00298g00114 Petunia axillaris HOM05D000849 ORTHO05D003989 2.2e-07 58.9 72 44.4
QL02p086970 Quercus lobata HOM05D000849 ORTHO05D003989 2.2e-07 58.9 72 44.4
SHI50902 Sapria himalayana HOM05D010923 ORTHO05D003989 2.2e-07 58.9 38 68.4
TWI63G0367 Tripterygium wilfordii HOM05D000849 ORTHO05D003989 2.2e-07 58.9 72 44.4
TAR636G1139 Trochodendron aralioides HOM05D000849 ORTHO05D003989 2.2e-07 58.9 72 45.8
Atru.chr7.1508 Acer truncatum HOM05D000849 ORTHO05D003989 2.9e-07 58.5 72 44.4
Aqoxy7G03958 Aquilegia oxysepala HOM05D000849 ORTHO05D003989 2.9e-07 58.5 72 43.1
Cpa.g.sc78.44 Carica papaya HOM05D000849 ORTHO05D003989 2.9e-07 58.5 72 44.4
CiPaw.03G221100 Carya illinoinensis HOM05D000849 ORTHO05D003989 2.9e-07 58.5 72 44.4
Ciclev10009831m.g Citrus clementina HOM05D000849 ORTHO05D003989 2.9e-07 58.5 72 44.4
Haze_25852 Corylus avellana HOM05D000849 ORTHO05D003989 2.9e-07 58.5 72 44.4
Duzib150G0327 Durio zibethinus HOM05D000849 ORTHO05D003989 2.9e-07 58.5 72 44.4
Eucgr.C00951 Eucalyptus grandis HOM05D000849 ORTHO05D003989 2.9e-07 58.5 72 44.4
MBI04_g06989_MAGBIO Magnolia biondii HOM05D000849 ORTHO05D003989 2.9e-07 58.5 72 44.4
PSO210G0713 Papaver somniferum HOM05D000849 ORTHO05D003989 2.9e-07 58.5 72 44.4
PSO210G7720 Papaver somniferum HOM05D000849 ORTHO05D003989 2.9e-07 58.5 72 44.4
PGR142G0605 Punica granatum HOM05D000849 ORTHO05D003989 2.9e-07 58.5 72 44.4
Hund26299 Selenicereus undatus HOM05D000849 ORTHO05D003989 2.9e-07 58.5 72 44.4
Thecc.09G096900 Theobroma cacao HOM05D000849 ORTHO05D003989 2.9e-07 58.5 72 44.4
HPP92_009846 Vanilla planifolia HOM05D000849 ORTHO05D003989 2.9e-07 58.5 72 44.4
Nn8g39010 Nelumbo nucifera HOM05D000849 ORTHO05D003989 3.8e-07 58.2 72 43.1
Phvul.008G154900 Phaseolus vulgaris HOM05D000849 ORTHO05D003989 3.8e-07 58.2 73 41.1
Potri.006G149100 Populus trichocarpa HOM05D000849 ORTHO05D003989 3.8e-07 58.2 72 44.4
SalBow6G5864 Salvia bowleyana HOM05D000849 ORTHO05D003989 3.8e-07 58.2 81 38.3
Aqoxy7G01359 Aquilegia oxysepala HOM05D000849 ORTHO05D003989 4.9e-07 57.8 72 43.1
AUR62033272 Chenopodium quinoa HOM05D000849 ORTHO05D003989 4.9e-07 57.8 72 43.1
Manes.16G106500 Manihot esculenta HOM05D000849 ORTHO05D003989 4.9e-07 57.8 72 43.1
Sabra06G0117900 Salix brachista HOM05D000849 ORTHO05D003989 4.9e-07 57.8 72 43.1
SHI43352 Sapria himalayana HOM05D010923 ORTHO05D003989 4.9e-07 57.8 34 79.4
Sed0020746 Sechium edule HOM05D000849 ORTHO05D003989 4.9e-07 57.8 72 43.1
BcaB03g16769 Brassica carinata HOM05D000849 ORTHO05D003989 6.4e-07 57.4 72 41.7
BcaC06g36622 Brassica carinata HOM05D000849 ORTHO05D003989 6.4e-07 57.4 72 41.7
A07p00920 Brassica napus HOM05D000849 ORTHO05D003989 6.4e-07 57.4 72 41.7
C07p02080 Brassica napus HOM05D000849 ORTHO05D003989 6.4e-07 57.4 72 41.7
BraA07t27892Z Brassica rapa HOM05D000849 ORTHO05D003989 6.4e-07 57.4 72 41.7
ECA236G3815 Erigeron canadensis HOM05D000849 ORTHO05D003989 6.4e-07 57.4 72 43.1
Migut.K00562 Erythranthe guttata HOM05D000849 ORTHO05D003989 6.4e-07 57.4 72 41.7
Lsat_1_v5_gn_8_88280 Lactuca sativa HOM05D000849 ORTHO05D003989 6.4e-07 57.4 72 43.1
Nitab4.5_0004180g0010 Nicotiana tabacum HOM05D000849 ORTHO05D003989 6.4e-07 57.4 72 43.1
SHI27184 Sapria himalayana HOM05D000849 ORTHO05D003989 6.4e-07 57.4 31 74.2
SHI46084 Sapria himalayana HOM05D000849 ORTHO05D003989 6.4e-07 57.4 41 65.9
SGA_v2.0_scaffold279G46782 Striga asiatica HOM05D000849 ORTHO05D003989 6.4e-07 57.4 72 43.1
SGA_v2.0_scaffold302G47808 Striga asiatica HOM05D000849 ORTHO05D003989 6.4e-07 57.4 72 43.1
vmacro06264 Vaccinium macrocarpon HOM05D000849 ORTHO05D003989 6.4e-07 57.4 72 43.1
CSS0012070 Camellia sinensis var. sinensis HOM05D000849 ORTHO05D003989 8.4e-07 57.0 72 43.1
Cc06_g10770 Coffea canephora HOM05D000849 ORTHO05D003989 8.4e-07 57.0 72 43.1
Glyma.01G005300 Glycine max HOM05D000849 ORTHO05D003989 8.4e-07 57.0 72 43.1
Glyma.07G126300 Glycine max HOM05D000849 ORTHO05D003989 8.4e-07 57.0 72 43.1
Manes.03G029400 Manihot esculenta HOM05D000849 ORTHO05D003989 8.4e-07 57.0 72 41.7
Oeu036246.1 Olea europaea HOM05D000849 ORTHO05D003989 8.4e-07 57.0 72 43.1
Os08g0395300 Oryza sativa ssp. japonica HOM05D000849 ORTHO05D003989 8.4e-07 57.0 72 41.7
Phvul.004G173800 Phaseolus vulgaris HOM05D000849 ORTHO05D003989 8.4e-07 57.0 72 43.1
unitig_26.g9704 Utricularia gibba HOM05D000849 ORTHO05D003989 8.4e-07 57.0 72 41.7
MSTRG.6030 Avicennia marina HOM05D000849 ORTHO05D003989 1.1e-06 56.6 72 41.7
CDE05G3423 Ceratophyllum demersum HOM05D000849 ORTHO05D003989 1.1e-06 56.6 71 43.7
HPP92_024117 Vanilla planifolia HOM05D000849 ORTHO05D003989 1.1e-06 56.6 72 41.7
VMungo0464G2126 Vigna mungo HOM05D000849 ORTHO05D003989 1.1e-06 56.6 72 43.1
Actinidia17501 Actinidia chinensis HOM05D000849 ORTHO05D003989 1.4e-06 56.2 72 43.1
CDE05G2264 Ceratophyllum demersum HOM05D000849 ORTHO05D003989 1.4e-06 56.2 71 42.3
SHI53541 Sapria himalayana HOM05D000849 ORTHO05D003989 1.4e-06 56.2 36 72.2
SHI53653 Sapria himalayana HOM05D000849 ORTHO05D003989 1.4e-06 56.2 36 72.2
ATR0705G079 Amborella trichopoda HOM05D000849 ORTHO05D003989 1.9e-06 55.8 72 41.7
MSTRG.19541 Avicennia marina HOM05D000849 ORTHO05D003989 2.4e-06 55.5 72 40.3
Mapoly0016s0005 Marchantia polymorpha HOM05D000849 ORTHO05D003989 2.4e-06 55.5 72 43.1
AL3G48440 Arabidopsis lyrata HOM05D000849 ORTHO05D003989 3.2e-06 55.1 72 40.3
AT2G19790 Arabidopsis thaliana HOM05D000849 ORTHO05D003989 3.2e-06 55.1 72 40.3
arahy.Tifrunner.gnm1.ann1.URAI8Z Arachis hypogaea HOM05D000849 ORTHO05D003989 3.2e-06 55.1 72 41.7
arahy.Tifrunner.gnm1.ann1.XR2T8G Arachis hypogaea HOM05D000849 ORTHO05D003989 3.2e-06 55.1 72 41.7
BcaC04g22820 Brassica carinata HOM05D000849 ORTHO05D003989 3.2e-06 55.1 72 40.3
A09p12580 Brassica napus HOM05D000849 ORTHO05D003989 3.2e-06 55.1 72 40.3
C09p14940 Brassica napus HOM05D000849 ORTHO05D003989 3.2e-06 55.1 72 40.3
BolC7t40613H Brassica oleracea HOM05D000849 ORTHO05D003989 3.2e-06 55.1 72 40.3
BolC9t54396H Brassica oleracea HOM05D000849 ORTHO05D003989 3.2e-06 55.1 72 40.3
BraA09t36905Z Brassica rapa HOM05D000849 ORTHO05D003989 3.2e-06 55.1 72 40.3
Carub.0003s3407 Capsella rubella HOM05D000849 ORTHO05D003989 3.2e-06 55.1 72 40.3
CARHR110250 Cardamine hirsuta HOM05D000849 ORTHO05D003989 3.2e-06 55.1 72 40.3
Lalb_Chr14g0375221 Lupinus albus HOM05D000849 ORTHO05D003989 3.2e-06 55.1 72 41.7
Os10g0368400 Oryza sativa ssp. japonica HOM05D000849 ORTHO05D003989 3.2e-06 55.1 72 40.3
SHI35365 Sapria himalayana HOM05D000849 ORTHO05D003989 3.2e-06 55.1 73 43.8
Sp3g33140 Schrenkiella parvula HOM05D000849 ORTHO05D003989 3.2e-06 55.1 72 40.3
Sc08g0008140 Simmondsia chinensis HOM05D000849 ORTHO05D003989 3.2e-06 55.1 71 42.3
Solyc05g026130.3 Solanum lycopersicum HOM05D000849 ORTHO05D003989 3.2e-06 55.1 72 41.7
Sopen05g022340 Solanum pennellii HOM05D000849 ORTHO05D003989 3.2e-06 55.1 72 41.7
PGSC0003DMG400028942 Solanum tuberosum HOM05D000849 ORTHO05D003989 3.2e-06 55.1 72 41.7
Zm00001eb178620 Zea mays HOM05D000849 ORTHO05D003989 3.2e-06 55.1 72 40.3
AagrBONN_evm.TU.Sc2ySwM_362.940 Anthoceros agrestis HOM05D000849 ORTHO05D003989 4.2e-06 54.7 74 41.9
PSO832G0835 Papaver somniferum HOM05D000849 ORTHO05D003989 4.2e-06 54.7 71 39.4
PGR102G1239 Punica granatum HOM05D000849 ORTHO05D003989 4.2e-06 54.7 71 42.3
SHI49175 Sapria himalayana HOM05D000849 ORTHO05D003989 4.2e-06 54.7 37 70.3
FvH4_5g22770 Fragaria vesca HOM05D000849 ORTHO05D003989 5.4e-06 54.3 72 41.7
FAN18G0868 Fragaria x ananassa HOM05D000849 ORTHO05D003989 5.4e-06 54.3 72 41.7
Phvul.002G306700 Phaseolus vulgaris HOM05D000849 ORTHO05D003989 5.4e-06 54.3 30 73.3
SEGI_24636 Sequoiadendron giganteum HOM05D000849 ORTHO05D003989 5.4e-06 54.3 72 41.7
THA.LOC104814582 Tarenaya hassleriana HOM05D000849 ORTHO05D003989 5.4e-06 54.3 72 41.7
THA.LOC104820037 Tarenaya hassleriana HOM05D000849 ORTHO05D003989 5.4e-06 54.3 72 40.3
VMungo0251G1053 Vigna mungo HOM05D000849 ORTHO05D003989 5.4e-06 54.3 30 73.3
Lj2g0010400 Lotus japonicus HOM05D000849 ORTHO05D003989 7.1e-06 53.9 72 40.3
Lj4g0006741 Lotus japonicus HOM05D000849 ORTHO05D003989 7.1e-06 53.9 72 41.7
Aa31LG8G16770 Aethionema arabicum HOM05D000849 ORTHO05D003989 9.3e-06 53.5 72 38.9
CBR_g2797 Chara braunii HOM05D000849 ORTHO05D003989 9.3e-06 53.5 69 44.9
PSO063G4962 Papaver somniferum HOM05D000849 ORTHO05D003989 9.3e-06 53.5 71 39.4
PSO782G5042 Papaver somniferum HOM05D000849 ORTHO05D003989 9.3e-06 53.5 71 39.4
GSVIVG01015270001 Vitis vinifera HOM05D000849 ORTHO05D003989 9.3e-06 53.5 70 42.9


User provided reference genes

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