Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI03472 Sapria himalayana HOM05D001930 ORTHO05D001345 5.5e-66 254.2 133 100.0
Cpa.g.sc19.190 Carica papaya HOM05D001930 ORTHO05D001345 3.7e-22 108.6 125 52.8
Rhsim03G0142000 Rhododendron simsii HOM05D001930 ORTHO05D001345 1.0e-19 100.5 126 48.4
Manes.10G014000 Manihot esculenta HOM05D001930 ORTHO05D001345 1.3e-19 100.1 132 50.8
CSS0031125 Camellia sinensis var. sinensis HOM05D001930 ORTHO05D001345 1.7e-19 99.8 137 45.3
RcHm_v2.0_Chr1g0369981 Rosa chinensis HOM05D001930 ORTHO05D001345 2.3e-19 99.4 120 52.5
MD07G1220200 Malus domestica HOM05D001930 ORTHO05D001345 2.9e-19 99.0 120 52.5
Hma1.2p1_0446F.1_g154590 Hydrangea macrophylla HOM05D001930 ORTHO05D001345 3.8e-19 98.6 121 49.6
Ciclev10030993m.g Citrus clementina HOM05D001930 ORTHO05D001345 8.6e-19 97.4 132 50.8
FvH4_7g24320 Fragaria vesca HOM05D001930 ORTHO05D001345 1.1e-18 97.1 128 50.8
FAN01G1543 Fragaria x ananassa HOM05D001930 ORTHO05D001345 1.1e-18 97.1 128 50.8
FAN10G2989 Fragaria x ananassa HOM05D001930 ORTHO05D001345 1.1e-18 97.1 128 50.8
CANSAT56G4542 Cannabis sativa HOM05D001930 ORTHO05D001345 1.5e-18 96.7 120 51.7
Dinv17980 Davidia involucrata HOM05D001930 ORTHO05D001345 1.5e-18 96.7 125 47.2
MD01G1132400 Malus domestica HOM05D001930 ORTHO05D001345 1.5e-18 96.7 120 51.7
Eucgr.G03055 Eucalyptus grandis HOM05D001930 ORTHO05D001345 1.9e-18 96.3 131 45.0
Aqoxy2G00919 Aquilegia oxysepala HOM05D001930 ORTHO05D001345 3.3e-18 95.5 115 48.7
CiPaw.01G297400 Carya illinoinensis HOM05D001930 ORTHO05D001345 4.2e-18 95.1 127 50.4
FAN03G2510 Fragaria x ananassa HOM05D001930 ORTHO05D001345 9.5e-18 94.0 128 50.0
Cfa001331 Carpinus fangiana HOM05D001930 ORTHO05D001345 1.2e-17 93.6 133 46.6
CANSAT56G0325 Cannabis sativa HOM05D001930 ORTHO05D001345 1.6e-17 93.2 119 52.1
ClCG11G006220 Citrullus lanatus HOM05D001930 ORTHO05D001345 2.1e-17 92.8 136 47.1
Thecc.10G020700 Theobroma cacao HOM05D001930 ORTHO05D001345 2.1e-17 92.8 129 50.4
TAR369G0785 Trochodendron aralioides HOM05D001930 ORTHO05D001345 2.8e-17 92.4 120 48.3
Nn2g11456 Nelumbo nucifera HOM05D001930 ORTHO05D001345 3.6e-17 92.0 121 49.6
PGR142G0208 Punica granatum HOM05D001930 ORTHO05D001345 3.6e-17 92.0 121 45.5
CARHR135010 Cardamine hirsuta HOM05D001930 ORTHO05D001345 6.1e-17 91.3 121 47.1
Thhalv10016404m.g Eutrema salsugineum HOM05D001930 ORTHO05D001345 6.1e-17 91.3 121 47.1
MELO3C008291.2 Cucumis melo HOM05D001930 ORTHO05D001345 1.4e-16 90.1 135 45.9
Nn2g13688 Nelumbo nucifera HOM05D001930 ORTHO05D001345 1.4e-16 90.1 109 49.5
Sp4g22360 Schrenkiella parvula HOM05D001930 ORTHO05D001345 1.8e-16 89.7 121 46.3
Sed0016379 Sechium edule HOM05D001930 ORTHO05D001345 1.8e-16 89.7 136 44.9
Glyma.18G028700 Glycine max HOM05D001930 ORTHO05D001345 2.3e-16 89.4 124 46.8
THA.LOC104810417 Tarenaya hassleriana HOM05D001930 ORTHO05D001345 4.0e-16 88.6 119 47.9
GSVIVG01032844001 Vitis vinifera HOM05D001930 ORTHO05D001345 8.9e-16 87.4 123 47.2
Nitab4.5_0000802g0030 Nicotiana tabacum HOM05D001930 ORTHO05D001345 1.5e-15 86.7 130 41.5
Hma1.2p1_0281F.1_g113000 Hydrangea macrophylla HOM05D001930 ORTHO05D001345 2.0e-15 86.3 131 42.0
CsaV3_6G001770 Cucumis sativus L. HOM05D001930 ORTHO05D001345 2.6e-15 85.9 134 44.8
Duzib106G1667 Durio zibethinus HOM05D001930 ORTHO05D001345 2.6e-15 85.9 129 48.1
Lj8C68G6 Lonicera japonica HOM05D001930 ORTHO05D001345 2.6e-15 85.9 121 44.6
Nitab4.5_0003138g0040 Nicotiana tabacum HOM05D001930 ORTHO05D001345 3.4e-15 85.5 124 40.3
COL.COLO4_25689 Corchorus olitorius HOM05D001930 ORTHO05D001345 4.4e-15 85.1 129 46.5
Nitab4.5_0008493g0010 Nicotiana tabacum HOM05D001930 ORTHO05D001345 4.4e-15 85.1 135 42.2
Aa31LG5G19550 Aethionema arabicum HOM05D001930 ORTHO05D001345 5.7e-15 84.7 121 44.6
AT2G40070 Arabidopsis thaliana HOM05D001930 ORTHO05D001345 7.5e-15 84.3 122 45.9
Gohir.D04G067400 Gossypium hirsutum HOM05D001930 ORTHO05D001345 9.8e-15 84.0 129 46.5
Lj1A953G44 Lonicera japonica HOM05D001930 ORTHO05D001345 1.3e-14 83.6 122 44.3
VMungo1383G0091 Vigna mungo HOM05D001930 ORTHO05D001345 1.3e-14 83.6 110 46.4
BolC4t22362H Brassica oleracea HOM05D001930 ORTHO05D001345 1.7e-14 83.2 128 45.3
Gorai.012G076400 Gossypium raimondii HOM05D001930 ORTHO05D001345 1.7e-14 83.2 129 46.5
Lj6g0015169 Lotus japonicus HOM05D001930 ORTHO05D001345 1.7e-14 83.2 128 43.8
LjContig00142g0017848 Lotus japonicus HOM05D001930 ORTHO05D001345 1.7e-14 83.2 128 43.8
Lalb_Chr15g0084191 Lupinus albus HOM05D001930 ORTHO05D001345 1.7e-14 83.2 134 41.0
Phvul.001G241800 Phaseolus vulgaris HOM05D001930 ORTHO05D001345 1.7e-14 83.2 110 46.4
arahy.Tifrunner.gnm1.ann1.G8RZTB Arachis hypogaea HOM05D001930 ORTHO05D001345 2.2e-14 82.8 141 44.0
arahy.Tifrunner.gnm1.ann1.I8BS46 Arachis hypogaea HOM05D001930 ORTHO05D001345 2.2e-14 82.8 141 44.0
BcaB02g09056 Brassica carinata HOM05D001930 ORTHO05D001345 2.2e-14 82.8 129 45.0
Actinidia13930 Actinidia chinensis HOM05D001930 ORTHO05D001345 2.8e-14 82.4 113 45.1
Glyma.11G228400 Glycine max HOM05D001930 ORTHO05D001345 2.8e-14 82.4 124 45.2
PSO339G3119 Papaver somniferum HOM05D001930 ORTHO05D001345 3.7e-14 82.0 131 41.2
Solyc05g052715.1 Solanum lycopersicum HOM05D001930 ORTHO05D001345 3.7e-14 82.0 130 42.3
Actinidia00941 Actinidia chinensis HOM05D001930 ORTHO05D001345 4.9e-14 81.6 113 44.2
Duzib128G0280 Durio zibethinus HOM05D001930 ORTHO05D001345 6.3e-14 81.3 129 46.5
Atru.chr12.18 Acer truncatum HOM05D001930 ORTHO05D001345 8.3e-14 80.9 136 44.9
AL4G37690 Arabidopsis lyrata HOM05D001930 ORTHO05D001345 8.3e-14 80.9 123 46.3
Nitab4.5_0002100g0020 Nicotiana tabacum HOM05D001930 ORTHO05D001345 8.3e-14 80.9 130 41.5
Carub.0004s2221 Capsella rubella HOM05D001930 ORTHO05D001345 1.8e-13 79.7 123 43.9
Duzib114G0676 Durio zibethinus HOM05D001930 ORTHO05D001345 1.8e-13 79.7 128 45.3
Lsat_1_v5_gn_8_12340 Lactuca sativa HOM05D001930 ORTHO05D001345 2.4e-13 79.3 124 44.4
DCAR_024834 Daucus carota HOM05D001930 ORTHO05D001345 3.2e-13 79.0 125 40.8
Gohir.D10G247300 Gossypium hirsutum HOM05D001930 ORTHO05D001345 3.2e-13 79.0 128 44.5
Gorai.011G285700 Gossypium raimondii HOM05D001930 ORTHO05D001345 3.2e-13 79.0 128 44.5
PSO801G0843 Papaver somniferum HOM05D001930 ORTHO05D001345 3.2e-13 79.0 131 39.7
THA.LOC104810086 Tarenaya hassleriana HOM05D001930 ORTHO05D001345 3.2e-13 79.0 125 44.0
Ca_15267_v3 Cicer arietinum L. HOM05D001930 ORTHO05D001345 9.2e-13 77.4 129 42.6
DCAR_028566 Daucus carota HOM05D001930 ORTHO05D001345 2.0e-12 76.3 126 42.1
Oeu025644.2 Olea europaea HOM05D001930 ORTHO05D001345 2.0e-12 76.3 121 42.1
Sopen03g026190 Solanum pennellii HOM05D001930 ORTHO05D001345 2.0e-12 76.3 118 39.0
Lsat_1_v5_gn_2_122761 Lactuca sativa HOM05D001930 ORTHO05D001345 2.7e-12 75.9 139 37.4
Lalb_Chr10g0105111 Lupinus albus HOM05D001930 ORTHO05D001345 3.5e-12 75.5 128 42.2
CDE07G0205 Ceratophyllum demersum HOM05D001930 ORTHO05D001345 4.5e-12 75.1 127 39.4
Peaxi162Scf01208g00017 Petunia axillaris HOM05D001930 ORTHO05D001345 4.5e-12 75.1 126 37.3
PGSC0003DMG401011931 Solanum tuberosum HOM05D001930 ORTHO05D001345 4.5e-12 75.1 118 38.1
PGSC0003DMG402011931 Solanum tuberosum HOM05D001930 ORTHO05D001345 4.5e-12 75.1 118 38.1
CAN.G301.5 Capsicum annuum HOM05D001930 ORTHO05D001345 5.9e-12 74.7 123 38.2
Gohir.A10G234900 Gossypium hirsutum HOM05D001930 ORTHO05D001345 5.9e-12 74.7 128 43.8
Glyma.14G060100 Glycine max HOM05D001930 ORTHO05D001345 7.8e-12 74.3 137 36.5
Psat5g126440 Pisum sativum HOM05D001930 ORTHO05D001345 1.3e-11 73.6 141 37.6
MBI14_g28262_MAGBIO Magnolia biondii HOM05D001930 ORTHO05D001345 1.7e-11 73.2 132 40.9
Medtr3g070300 Medicago truncatula HOM05D001930 ORTHO05D001345 1.7e-11 73.2 126 38.9
HanXRQChr14g0459861 Helianthus annuus HOM05D001930 ORTHO05D001345 2.9e-11 72.4 120 41.7
Phvul.008G224800 Phaseolus vulgaris HOM05D001930 ORTHO05D001345 2.9e-11 72.4 132 40.9
TPR.G2544 Trifolium pratense HOM05D001930 ORTHO05D001345 2.9e-11 72.4 141 36.9
Ah.16g103400 Amaranthus hybridus HOM05D001930 ORTHO05D001345 3.9e-11 72.0 110 39.1
Migut.F00675 Erythranthe guttata HOM05D001930 ORTHO05D001345 3.9e-11 72.0 108 41.7
Lalb_Chr18g0052641 Lupinus albus HOM05D001930 ORTHO05D001345 3.9e-11 72.0 124 40.3
ATR0618G241 Amborella trichopoda HOM05D001930 ORTHO05D001345 5.0e-11 71.6 108 38.0
SalBow6G0604 Salvia bowleyana HOM05D001930 ORTHO05D001345 8.6e-11 70.9 108 41.7
SGA_v2.0_scaffold44G16687 Striga asiatica HOM05D001930 ORTHO05D001345 1.1e-10 70.5 107 41.1
ECA238G2369 Erigeron canadensis HOM05D001930 ORTHO05D001345 1.5e-10 70.1 113 43.4
MBI05_g34494_MAGBIO Magnolia biondii HOM05D001930 ORTHO05D001345 1.5e-10 70.1 121 39.7
unitig_46.g18737 Utricularia gibba HOM05D001930 ORTHO05D001345 1.5e-10 70.1 126 37.3
MSTRG.27324 Avicennia marina HOM05D001930 ORTHO05D001345 1.9e-10 69.7 106 39.6
SGA_v2.0_scaffold60G20991 Striga asiatica HOM05D001930 ORTHO05D001345 1.9e-10 69.7 108 42.6
VMungo0647G2500 Vigna mungo HOM05D001930 ORTHO05D001345 1.9e-10 69.7 132 40.2
Glyma.02G256600 Glycine max HOM05D001930 ORTHO05D001345 2.5e-10 69.3 133 37.6
MBI03_g07299_MAGBIO Magnolia biondii HOM05D001930 ORTHO05D001345 2.5e-10 69.3 108 39.8
Ah.10g036510 Amaranthus hybridus HOM05D001930 ORTHO05D001345 9.5e-10 67.4 111 37.8
CiPaw.02G191300 Carya illinoinensis HOM05D001930 ORTHO05D001345 9.5e-10 67.4 134 35.8
AUR62012234 Chenopodium quinoa HOM05D001930 ORTHO05D001345 1.2e-09 67.0 111 38.7
Oeu048249.1 Olea europaea HOM05D001930 ORTHO05D001345 1.6e-09 66.6 107 42.1
arahy.Tifrunner.gnm1.ann1.1VS4ZL Arachis hypogaea HOM05D001930 ORTHO05D001345 2.1e-09 66.2 139 36.0
arahy.Tifrunner.gnm1.ann1.P8UNKF Arachis hypogaea HOM05D001930 ORTHO05D001345 2.1e-09 66.2 139 36.0
Actinidia11600 Actinidia chinensis HOM05D001930 ORTHO05D001345 2.8e-09 65.9 119 36.1
MSTRG.8950 Avicennia marina HOM05D001930 ORTHO05D001345 2.8e-09 65.9 123 39.0
C04p07410 Brassica napus HOM05D001930 ORTHO05D001345 3.6e-09 65.5 123 42.3
vmacro06978 Vaccinium macrocarpon HOM05D001930 ORTHO05D001345 3.6e-09 65.5 126 35.7
Oeu064385.2 Olea europaea HOM05D001930 ORTHO05D001345 6.1e-09 64.7 134 38.1
Cc02_g06660 Coffea canephora HOM05D001930 ORTHO05D001345 8.0e-09 64.3 133 37.6
HanXRQChr12g0370531 Helianthus annuus HOM05D001930 ORTHO05D001345 8.0e-09 64.3 126 37.3
Potri.008G066900 Populus trichocarpa HOM05D001930 ORTHO05D001345 8.0e-09 64.3 92 41.3
EL10Ac2g04813 Beta vulgaris HOM05D001930 ORTHO05D001345 1.0e-08 63.9 111 37.8
MBI02_g39000_MAGBIO Magnolia biondii HOM05D001930 ORTHO05D001345 1.4e-08 63.5 109 38.5
AUR62022866 Chenopodium quinoa HOM05D001930 ORTHO05D001345 1.8e-08 63.2 110 37.3
Lalb_Chr17g0346731 Lupinus albus HOM05D001930 ORTHO05D001345 1.8e-08 63.2 127 36.2
CiPaw.02G191500 Carya illinoinensis HOM05D001930 ORTHO05D001345 2.3e-08 62.8 132 34.1
Glyma.18G199700 Glycine max HOM05D001930 ORTHO05D001345 2.3e-08 62.8 111 37.8
Dinv23092 Davidia involucrata HOM05D001930 ORTHO05D001345 3.1e-08 62.4 107 35.5
Sabra10G0146700 Salix brachista HOM05D001930 ORTHO05D001345 3.1e-08 62.4 131 36.6
Hund13841 Selenicereus undatus HOM05D001930 ORTHO05D001345 3.1e-08 62.4 110 34.5
Phvul.008G105200 Phaseolus vulgaris HOM05D001930 ORTHO05D001345 4.0e-08 62.0 111 38.7
Sopen03g026220 Solanum pennellii HOM05D001930 ORTHO05D001345 4.0e-08 62.0 112 35.7
Sopen03g026280 Solanum pennellii HOM05D001930 ORTHO05D001345 4.0e-08 62.0 112 35.7
A05p06400 Brassica napus HOM05D001930 ORTHO05D001345 5.2e-08 61.6 127 38.6
BraA05t19608Z Brassica rapa HOM05D001930 ORTHO05D001345 5.2e-08 61.6 127 38.6
BcaB06g29123 Brassica carinata HOM05D001930 ORTHO05D001345 6.8e-08 61.2 108 41.7
FvH4_7g24310 Fragaria vesca HOM05D001930 ORTHO05D001345 8.9e-08 60.8 97 44.3
DCAR_011804 Daucus carota HOM05D001930 ORTHO05D001345 1.2e-07 60.5 107 36.4
Dinv34396 Davidia involucrata HOM05D001930 ORTHO05D001345 1.2e-07 60.5 125 35.2
Medtr7g068220 Medicago truncatula HOM05D001930 ORTHO05D001345 1.2e-07 60.5 111 37.8
VMungo1383G2844 Vigna mungo HOM05D001930 ORTHO05D001345 1.2e-07 60.5 111 38.7
Manes.07G128300 Manihot esculenta HOM05D001930 ORTHO05D001345 1.5e-07 60.1 89 43.8
Potri.010G190300 Populus trichocarpa HOM05D001930 ORTHO05D001345 2.0e-07 59.7 131 35.1
Lalb_Chr03g0043161 Lupinus albus HOM05D001930 ORTHO05D001345 2.6e-07 59.3 111 37.8
Glyma.15G036000 Glycine max HOM05D001930 ORTHO05D001345 3.4e-07 58.9 60 56.7
arahy.Tifrunner.gnm1.ann1.238B6D Arachis hypogaea HOM05D001930 ORTHO05D001345 4.4e-07 58.5 111 36.0
arahy.Tifrunner.gnm1.ann1.CY1II1 Arachis hypogaea HOM05D001930 ORTHO05D001345 4.4e-07 58.5 111 36.0
Ca_07629_v3 Cicer arietinum L. HOM05D001930 ORTHO05D001345 4.4e-07 58.5 111 37.8
FAN01G2663 Fragaria x ananassa HOM05D001930 ORTHO05D001345 4.4e-07 58.5 94 43.6
arahy.Tifrunner.gnm1.ann1.84M4BY Arachis hypogaea HOM05D001930 ORTHO05D001345 5.8e-07 58.2 111 35.1
A04p30110 Brassica napus HOM05D001930 ORTHO05D001345 5.8e-07 58.2 109 36.7
Lj1g0022400 Lotus japonicus HOM05D001930 ORTHO05D001345 5.8e-07 58.2 110 37.3
HPP92_019257 Vanilla planifolia HOM05D001930 ORTHO05D001345 5.8e-07 58.2 131 35.1
Sopen05g031250 Solanum pennellii HOM05D001930 ORTHO05D001345 7.5e-07 57.8 37 70.3
PGSC0003DMG401027184 Solanum tuberosum HOM05D001930 ORTHO05D001345 7.5e-07 57.8 37 70.3
Ciclev10011390m.g Citrus clementina HOM05D001930 ORTHO05D001345 9.8e-07 57.4 111 36.0
Ca_05952_v3 Cicer arietinum L. HOM05D001930 ORTHO05D001345 2.9e-06 55.8 127 35.4
HanXRQChr08g0222141 Helianthus annuus HOM05D001930 ORTHO05D001345 2.9e-06 55.8 124 34.7
Psat3g128880 Pisum sativum HOM05D001930 ORTHO05D001345 2.9e-06 55.8 111 34.2
Potri.016G114900 Populus trichocarpa HOM05D001930 ORTHO05D001345 2.9e-06 55.8 111 36.0
unitig_37.g12462 Utricularia gibba HOM05D001930 ORTHO05D001345 2.9e-06 55.8 125 33.6
CAN.G503.8 Capsicum annuum HOM05D001930 ORTHO05D001345 3.7e-06 55.5 37 67.6
Glyma.07G148600 Glycine max HOM05D001930 ORTHO05D001345 4.9e-06 55.1 111 35.1
TWI77G0036 Tripterygium wilfordii HOM05D001930 ORTHO05D001345 6.4e-06 54.7 110 34.5


User provided reference genes

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