Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI03468 Sapria himalayana HOM05D000002 ORTHO05D364813 7.6e-55 216.9 105 100.0
ECA240G4233 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.5e-13 77.0 107 43.0
SHI06982 Sapria himalayana HOM05D000002 ORTHO05D000001 1.2e-12 76.6 77 53.2
ECA248G3634 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.6e-12 76.3 107 43.0
ECA233G3173 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.7e-12 74.7 83 45.8
ECA247G1119 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.7e-12 74.7 112 38.4
ECA238G0426 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.0e-11 73.6 112 37.5
SHI19839 Sapria himalayana HOM05D000002 ORTHO05D000001 1.0e-11 73.6 91 44.0
SHI14578 Sapria himalayana HOM05D000002 ORTHO05D000001 1.8e-11 72.8 91 45.1
SHI28896 Sapria himalayana HOM05D000002 ORTHO05D000001 1.8e-11 72.8 84 47.6
SHI29196 Sapria himalayana HOM05D000392 ORTHO05D000610 4.0e-11 71.6 40 87.5
Hma1.2p1_0039F.1_g024390 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 6.8e-11 70.9 109 39.4
ECA233G1505 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.2e-10 70.1 112 36.6
ECA240G2946 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.2e-10 70.1 112 36.6
ECA248G1039 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.2e-10 70.1 112 36.6
SHI16907 Sapria himalayana HOM05D000002 ORTHO05D000001 1.2e-10 70.1 84 46.4
SHI26117 Sapria himalayana HOM05D000002 ORTHO05D000001 2.0e-10 69.3 70 48.6
ECA248G3034 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.4e-10 68.6 112 35.7
CSS0032052 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.4e-10 68.2 63 57.1
MD10G1011700 Malus domestica HOM05D000002 ORTHO05D000001 4.4e-10 68.2 115 33.9
CSS0016795 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.7e-10 67.8 85 45.9
ECA238G1515 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.7e-10 67.8 112 35.7
CSS0012713 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.5e-10 67.4 92 41.3
CSS0024331 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 9.8e-10 67.0 116 36.2
SHI14685 Sapria himalayana HOM05D000002 ORTHO05D000001 9.8e-10 67.0 112 37.5
SHI16764 Sapria himalayana HOM05D000002 ORTHO05D000001 9.8e-10 67.0 112 37.5
SHI37367 Sapria himalayana HOM05D000002 ORTHO05D000080 9.8e-10 67.0 112 37.5
SHI18782 Sapria himalayana HOM05D000002 ORTHO05D000001 1.3e-09 66.6 112 36.6
SHI02145 Sapria himalayana HOM05D000002 ORTHO05D000001 1.7e-09 66.2 112 37.5
SHI25170 Sapria himalayana HOM05D000002 ORTHO05D000001 2.2e-09 65.9 112 37.5
CSS0040971 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.8e-09 65.5 107 36.4
SHI07537 Sapria himalayana HOM05D000002 ORTHO05D000001 2.8e-09 65.5 112 36.6
SHI36310 Sapria himalayana HOM05D000002 ORTHO05D000001 2.8e-09 65.5 118 33.9
Sopen01g016120 Solanum pennellii HOM05D000002 ORTHO05D000001 2.8e-09 65.5 129 32.6
SHI26422 Sapria himalayana HOM05D000002 ORTHO05D000001 3.7e-09 65.1 112 37.5
SHI15917 Sapria himalayana HOM05D000002 ORTHO05D000001 4.9e-09 64.7 70 45.7
SHI27060 Sapria himalayana HOM05D000002 ORTHO05D000001 4.9e-09 64.7 111 36.9
Sopen12g027810 Solanum pennellii HOM05D000002 ORTHO05D000001 4.9e-09 64.7 129 31.8
SHI04495 Sapria himalayana HOM05D000002 ORTHO05D000001 6.3e-09 64.3 112 36.6
SHI31661 Sapria himalayana HOM05D000002 ORTHO05D000001 6.3e-09 64.3 121 34.7
SHI35742 Sapria himalayana HOM05D000002 ORTHO05D000001 6.3e-09 64.3 112 36.6
Sopen10g021260 Solanum pennellii HOM05D000002 ORTHO05D000001 6.3e-09 64.3 87 40.2
FvH4_2g16312 Fragaria vesca HOM05D000002 ORTHO05D000001 8.3e-09 63.9 114 33.3
SHI05308 Sapria himalayana HOM05D000002 ORTHO05D000001 8.3e-09 63.9 112 36.6
SHI06261 Sapria himalayana HOM05D000002 ORTHO05D000001 8.3e-09 63.9 112 36.6
SHI07801 Sapria himalayana HOM05D000002 ORTHO05D000001 8.3e-09 63.9 112 35.7
SHI21336 Sapria himalayana HOM05D000002 ORTHO05D000001 8.3e-09 63.9 114 36.0
SHI33500 Sapria himalayana HOM05D000002 ORTHO05D000001 8.3e-09 63.9 119 35.3
Sopen05g015450 Solanum pennellii HOM05D000002 ORTHO05D000001 8.3e-09 63.9 129 31.8
Sopen07g008090 Solanum pennellii HOM05D000002 ORTHO05D000001 8.3e-09 63.9 129 31.8
Sopen12g009690 Solanum pennellii HOM05D000002 ORTHO05D000001 8.3e-09 63.9 129 31.8
SHI18436 Sapria himalayana HOM05D000002 ORTHO05D000001 1.1e-08 63.5 112 36.6
Sopen02g011470 Solanum pennellii HOM05D000002 ORTHO05D000001 1.1e-08 63.5 71 42.3
CSS0020427 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.4e-08 63.2 113 34.5
SHI12752 Sapria himalayana HOM05D000002 ORTHO05D000001 1.4e-08 63.2 78 46.2
SHI30438 Sapria himalayana HOM05D000002 ORTHO05D000001 1.4e-08 63.2 112 35.7
MD07G1274600 Malus domestica HOM05D000002 ORTHO05D000001 1.8e-08 62.8 116 33.6
SHI07921 Sapria himalayana HOM05D000002 ORTHO05D000001 1.8e-08 62.8 112 35.7
Sopen01g027030 Solanum pennellii HOM05D000002 ORTHO05D000001 1.8e-08 62.8 113 31.9
Sopen05g024300 Solanum pennellii HOM05D000002 ORTHO05D000001 1.8e-08 62.8 129 31.0
Sopen10g019840 Solanum pennellii HOM05D000002 ORTHO05D000001 1.8e-08 62.8 129 31.0
CSS0012950 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.4e-08 62.4 109 35.8
SHI29707 Sapria himalayana HOM05D000002 ORTHO05D000001 2.4e-08 62.4 112 35.7
CSS0040389 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.1e-08 62.0 114 33.3
MD10G1071400 Malus domestica HOM05D000002 ORTHO05D000001 3.1e-08 62.0 63 52.4
SHI27160 Sapria himalayana HOM05D000002 ORTHO05D000001 3.1e-08 62.0 113 35.4
CSS0004228 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.1e-08 61.6 107 34.6
CSS0030158 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.1e-08 61.6 96 37.5
CSS0045479 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.1e-08 61.6 107 34.6
SHI12349 Sapria himalayana HOM05D000002 ORTHO05D000001 4.1e-08 61.6 112 35.7
SHI14071 Sapria himalayana HOM05D000002 ORTHO05D000001 5.4e-08 61.2 112 35.7
SHI19883 Sapria himalayana HOM05D000002 ORTHO05D000001 5.4e-08 61.2 70 44.3
CSS0039281 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.0e-08 60.8 107 34.6
MD09G1238700 Malus domestica HOM05D000002 ORTHO05D000001 7.0e-08 60.8 115 32.2
SHI25733 Sapria himalayana HOM05D000002 ORTHO05D000001 7.0e-08 60.8 119 36.1
SHI31099 Sapria himalayana HOM05D000002 ORTHO05D000001 7.0e-08 60.8 111 35.1
Sopen01g009450 Solanum pennellii HOM05D000002 ORTHO05D000001 7.0e-08 60.8 129 31.0
Sopen10g024570 Solanum pennellii HOM05D000002 ORTHO05D000001 7.0e-08 60.8 129 31.0
MD02G1295200 Malus domestica HOM05D000002 ORTHO05D000001 9.2e-08 60.5 128 33.6
SHI14043 Sapria himalayana HOM05D000002 ORTHO05D000001 9.2e-08 60.5 112 35.7
SHI27900 Sapria himalayana HOM05D000002 ORTHO05D000001 9.2e-08 60.5 111 36.0
SHI28096 Sapria himalayana HOM05D000002 ORTHO05D000001 9.2e-08 60.5 97 40.2
SEGI_26607 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 9.2e-08 60.5 86 40.7
Sopen01g013480 Solanum pennellii HOM05D000002 ORTHO05D000001 9.2e-08 60.5 109 33.9
Sopen03g025100 Solanum pennellii HOM05D000002 ORTHO05D000001 9.2e-08 60.5 109 33.9
CSS0008639 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.2e-07 60.1 80 41.2
SHI05160 Sapria himalayana HOM05D000002 ORTHO05D000001 1.2e-07 60.1 112 34.8
SHI27482 Sapria himalayana HOM05D000002 ORTHO05D000001 1.2e-07 60.1 77 45.5
SHI32966 Sapria himalayana HOM05D000002 ORTHO05D000001 1.2e-07 60.1 113 34.5
Sopen03g009830 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-07 60.1 129 30.2
MSTRG.2296 Avicennia marina HOM05D000002 ORTHO05D000001 1.6e-07 59.7 134 30.6
CSS0040555 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.6e-07 59.7 94 38.3
SHI23401 Sapria himalayana HOM05D000002 ORTHO05D000001 1.6e-07 59.7 115 35.7
SHI27456 Sapria himalayana HOM05D000002 ORTHO05D000001 1.6e-07 59.7 112 35.7
Sopen01g027920 Solanum pennellii HOM05D000002 ORTHO05D000001 1.6e-07 59.7 129 30.2
Sopen08g011210 Solanum pennellii HOM05D000002 ORTHO05D000001 1.6e-07 59.7 113 31.0
Sopen10g017070 Solanum pennellii HOM05D000002 ORTHO05D000001 1.6e-07 59.7 129 30.2
RcHm_v2.0_Chr7g0237911 Rosa chinensis HOM05D000002 ORTHO05D000001 2.0e-07 59.3 108 33.3
SHI01434 Sapria himalayana HOM05D000002 ORTHO05D011000 2.0e-07 59.3 90 40.0
SHI16746 Sapria himalayana HOM05D000002 ORTHO05D000001 2.0e-07 59.3 112 33.9
SHI24173 Sapria himalayana HOM05D000002 ORTHO05D000001 2.0e-07 59.3 77 46.8
Sopen07g014860 Solanum pennellii HOM05D000002 ORTHO05D000001 2.0e-07 59.3 129 31.0
MSTRG.22736 Avicennia marina HOM05D000002 ORTHO05D000001 2.7e-07 58.9 134 30.6
SHI20414 Sapria himalayana HOM05D000002 ORTHO05D000001 2.7e-07 58.9 112 33.9
SHI23873 Sapria himalayana HOM05D000002 ORTHO05D000001 2.7e-07 58.9 78 46.2
SHI38274 Sapria himalayana HOM05D000002 ORTHO05D000001 2.7e-07 58.9 70 42.9
Sopen10g021210 Solanum pennellii HOM05D000002 ORTHO05D000001 2.7e-07 58.9 129 30.2
RcHm_v2.0_Chr1g0329831 Rosa chinensis HOM05D000002 ORTHO05D000001 3.5e-07 58.5 107 33.6
SHI02687 Sapria himalayana HOM05D000002 ORTHO05D000001 3.5e-07 58.5 112 34.8
Sopen01g020600 Solanum pennellii HOM05D000002 ORTHO05D000001 3.5e-07 58.5 131 32.1
Sopen06g007920 Solanum pennellii HOM05D000002 ORTHO05D000001 3.5e-07 58.5 117 33.3
Sopen09g029100 Solanum pennellii HOM05D000002 ORTHO05D000001 3.5e-07 58.5 117 33.3
CSS0014963 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.5e-07 58.2 109 33.0
CSS0040082 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.5e-07 58.2 109 34.9
SHI10422 Sapria himalayana HOM05D000002 ORTHO05D000001 4.5e-07 58.2 116 32.8
SHI22011 Sapria himalayana HOM05D000002 ORTHO05D000001 4.5e-07 58.2 117 35.0
SHI41576 Sapria himalayana HOM05D000002 ORTHO05D000001 4.5e-07 58.2 80 41.2
SHI42111 Sapria himalayana HOM05D000002 ORTHO05D000001 4.5e-07 58.2 80 41.2
SHI21288 Sapria himalayana HOM05D000002 ORTHO05D000001 5.9e-07 57.8 113 32.7
Sopen12g026370 Solanum pennellii HOM05D000002 ORTHO05D000001 5.9e-07 57.8 117 33.3
CSS0050078 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.7e-07 57.4 109 33.0
ECA236G0844 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.7e-07 57.4 115 31.3
FvH4_7g32173 Fragaria vesca HOM05D000002 ORTHO05D000001 7.7e-07 57.4 105 35.2
RcHm_v2.0_Chr1g0330731 Rosa chinensis HOM05D000002 ORTHO05D000001 7.7e-07 57.4 108 33.3
CSS0046072 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.0e-06 57.0 109 33.0
SHI03430 Sapria himalayana HOM05D000002 ORTHO05D000001 1.0e-06 57.0 112 34.8
SHI07391 Sapria himalayana HOM05D000002 ORTHO05D000001 1.0e-06 57.0 112 33.9
SHI34923 Sapria himalayana HOM05D000002 ORTHO05D000001 1.0e-06 57.0 85 42.4
Sopen01g009120 Solanum pennellii HOM05D000002 ORTHO05D000001 1.0e-06 57.0 103 35.0
Sopen05g007000 Solanum pennellii HOM05D000002 ORTHO05D000001 1.0e-06 57.0 129 29.5
MD05G1104800 Malus domestica HOM05D000002 ORTHO05D000001 1.3e-06 56.6 107 35.5
SHI24252 Sapria himalayana HOM05D000002 ORTHO05D000001 1.3e-06 56.6 80 40.0
SHI28891 Sapria himalayana HOM05D005377 ORTHO05D003034 1.3e-06 56.6 62 48.4
SHI35506 Sapria himalayana HOM05D000002 ORTHO05D000001 1.3e-06 56.6 85 38.8
SHI35072 Sapria himalayana HOM05D000002 ORTHO05D000001 1.7e-06 56.2 113 33.6
CSS0038846 Camellia sinensis var. sinensis HOM05D000006 ORTHO05D000001 2.3e-06 55.8 79 40.5
MD15G1383000 Malus domestica HOM05D000002 ORTHO05D000001 2.3e-06 55.8 115 29.6
Sopen01g009150 Solanum pennellii HOM05D000002 ORTHO05D000001 2.3e-06 55.8 109 32.1
SHI08885 Sapria himalayana HOM05D000002 ORTHO05D000001 2.9e-06 55.5 78 43.6
CSS0037299 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.0e-06 54.7 75 41.3
ECA234G3983 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.0e-06 54.7 131 31.3
SHI03310 Sapria himalayana HOM05D000002 ORTHO05D000001 5.0e-06 54.7 84 34.5
SHI06421 Sapria himalayana HOM05D000002 ORTHO05D000001 5.0e-06 54.7 112 33.0
SHI10777 Sapria himalayana HOM05D000002 ORTHO05D000001 5.0e-06 54.7 82 41.5
SHI32143 Sapria himalayana HOM05D000002 ORTHO05D000001 5.0e-06 54.7 91 38.5
Sopen00g013840 Solanum pennellii HOM05D000002 ORTHO05D000001 5.0e-06 54.7 109 33.0
Sopen05g010210 Solanum pennellii HOM05D000002 ORTHO05D000001 5.0e-06 54.7 109 33.0
Sopen10g016240 Solanum pennellii HOM05D000002 ORTHO05D000001 5.0e-06 54.7 109 33.0
Sopen10g031560 Solanum pennellii HOM05D000002 ORTHO05D000001 5.0e-06 54.7 109 33.0
Sopen11g010630 Solanum pennellii HOM05D000002 ORTHO05D000001 5.0e-06 54.7 109 33.0
CSS0012618 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.6e-06 54.3 84 39.3
Nn7g36004 Nelumbo nucifera HOM05D000026 ORTHO05D001436 6.6e-06 54.3 38 60.5
Sopen10g019480 Solanum pennellii HOM05D000002 ORTHO05D000001 6.6e-06 54.3 129 28.7
FvH4_3g12332 Fragaria vesca HOM05D000002 ORTHO05D000001 8.6e-06 53.9 107 31.8
MD03G1131300 Malus domestica HOM05D000002 ORTHO05D000001 8.6e-06 53.9 113 30.1
MD09G1044400 Malus domestica HOM05D000002 ORTHO05D000001 8.6e-06 53.9 106 34.0
SHI21922 Sapria himalayana HOM05D000002 ORTHO05D000001 8.6e-06 53.9 92 35.9
SHI26316 Sapria himalayana HOM05D000002 ORTHO05D000001 8.6e-06 53.9 78 42.3
SHI50889 Sapria himalayana HOM05D000002 ORTHO05D000001 8.6e-06 53.9 90 33.3
Sopen01g027300 Solanum pennellii HOM05D000002 ORTHO05D000001 8.6e-06 53.9 110 30.0
Sopen09g024420 Solanum pennellii HOM05D000002 ORTHO05D000001 8.6e-06 53.9 68 38.2
Sopen09g024450 Solanum pennellii HOM05D000002 ORTHO05D000001 8.6e-06 53.9 68 38.2


User provided reference genes

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