Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI03438 Sapria himalayana HOM05D002799 ORTHO05D008889 1.5e-86 322.8 160 100.0
Gohir.D11G175400 Gossypium hirsutum HOM05D002799 ORTHO05D008889 1.1e-28 130.6 128 53.1
Gorai.007G188000 Gossypium raimondii HOM05D002799 ORTHO05D008889 1.1e-28 130.6 128 53.1
Gohir.A11G169200 Gossypium hirsutum HOM05D002799 ORTHO05D008889 2.4e-28 129.4 128 53.1
Potri.019G048200 Populus trichocarpa HOM05D002799 ORTHO05D008889 3.2e-28 129.0 134 51.5
COL.COLO4_19775 Corchorus olitorius HOM05D002799 ORTHO05D008889 7.1e-28 127.9 139 46.0
Duzib133G0126 Durio zibethinus HOM05D002799 ORTHO05D008889 9.3e-28 127.5 128 52.3
VMungo0251G2787 Vigna mungo HOM05D002799 ORTHO05D008889 9.3e-28 127.5 139 45.3
Eucgr.K03383 Eucalyptus grandis HOM05D002799 ORTHO05D008889 1.2e-27 127.1 128 53.1
Manes.08G164500 Manihot esculenta HOM05D002799 ORTHO05D008889 1.2e-27 127.1 128 53.9
Rhsim03G0220500 Rhododendron simsii HOM05D000526 ORTHO05D000956 1.2e-27 127.1 141 48.9
Thecc.04G001600 Theobroma cacao HOM05D002799 ORTHO05D008889 1.2e-27 127.1 139 48.2
Sabra19G0057600 Salix brachista HOM05D002799 ORTHO05D008889 1.6e-27 126.7 137 51.8
Sopen10g002540 Solanum pennellii HOM05D002799 ORTHO05D008889 4.6e-27 125.2 128 52.3
Dinv29173 Davidia involucrata HOM05D002799 ORTHO05D008889 1.0e-26 124.0 128 53.1
Nn3g19277 Nelumbo nucifera HOM05D002799 ORTHO05D008889 1.0e-26 124.0 132 50.0
ClCG01G005050 Citrullus lanatus HOM05D002799 ORTHO05D008889 1.3e-26 123.6 135 48.1
CSS0012005 Camellia sinensis var. sinensis HOM05D002799 ORTHO05D008889 1.8e-26 123.2 128 52.3
CSS0036576 Camellia sinensis var. sinensis HOM05D002799 ORTHO05D008889 1.8e-26 123.2 128 52.3
Phvul.003G054200 Phaseolus vulgaris HOM05D002799 ORTHO05D008889 1.8e-26 123.2 139 44.6
vmacro06499 Vaccinium macrocarpon HOM05D002799 ORTHO05D008889 3.0e-26 122.5 128 50.8
Phvul.003G053900 Phaseolus vulgaris HOM05D002799 ORTHO05D008889 3.9e-26 122.1 139 44.6
Migut.M01834 Erythranthe guttata HOM05D002799 ORTHO05D008889 5.1e-26 121.7 121 50.4
Peaxi162Scf00257g00081 Petunia axillaris HOM05D002799 ORTHO05D008889 5.1e-26 121.7 128 50.0
CiPaw.05G237000 Carya illinoinensis HOM05D002799 ORTHO05D008889 6.7e-26 121.3 124 50.8
Cc05_g12950 Coffea canephora HOM05D002799 ORTHO05D008889 6.7e-26 121.3 141 46.8
CAN.G1110.21 Capsicum annuum HOM05D002799 ORTHO05D008889 8.7e-26 120.9 133 49.6
TAR629G0193 Trochodendron aralioides HOM05D002799 ORTHO05D008889 8.7e-26 120.9 128 50.0
RcHm_v2.0_Chr1g0383841 Rosa chinensis HOM05D002799 ORTHO05D008889 1.1e-25 120.6 134 46.3
TPR.G670 Trifolium pratense HOM05D002799 ORTHO05D008889 1.1e-25 120.6 128 47.7
Ca_14681_v3 Cicer arietinum L. HOM05D002799 ORTHO05D008889 1.5e-25 120.2 128 47.7
Haze_00591 Corylus avellana HOM05D002799 ORTHO05D008889 1.5e-25 120.2 124 50.0
Sc19g0000240 Simmondsia chinensis HOM05D002799 ORTHO05D008889 1.5e-25 120.2 138 46.4
PGSC0003DMG400024993 Solanum tuberosum HOM05D002799 ORTHO05D008889 1.5e-25 120.2 121 52.1
Aqoxy7G00884 Aquilegia oxysepala HOM05D002799 ORTHO05D008889 1.9e-25 119.8 128 48.4
GSVIVG01024450001 Vitis vinifera HOM05D002799 ORTHO05D008889 1.9e-25 119.8 121 52.1
BcaC04g23004 Brassica carinata HOM05D002799 ORTHO05D008889 2.5e-25 119.4 139 48.2
C09p13130 Brassica napus HOM05D002799 ORTHO05D008889 2.5e-25 119.4 139 48.2
BolC9t54208H Brassica oleracea HOM05D002799 ORTHO05D008889 2.5e-25 119.4 139 48.2
Sed0001745 Sechium edule HOM05D002799 ORTHO05D008889 2.5e-25 119.4 132 48.5
THA.LOC104803694 Tarenaya hassleriana HOM05D002799 ORTHO05D008889 2.5e-25 119.4 122 54.9
Nn1g02011 Nelumbo nucifera HOM05D002799 ORTHO05D008889 3.3e-25 119.0 128 47.7
AL3G49530 Arabidopsis lyrata HOM05D002799 ORTHO05D008889 4.3e-25 118.6 136 47.8
Actinidia08736 Actinidia chinensis HOM05D002799 ORTHO05D008889 5.6e-25 118.2 128 50.0
Medtr8g063470 Medicago truncatula HOM05D002799 ORTHO05D008889 5.6e-25 118.2 128 47.7
Prupe.2G323800 Prunus persica HOM05D002799 ORTHO05D008889 7.4e-25 117.9 132 49.2
SGA_v2.0_scaffold70G23573 Striga asiatica HOM05D002799 ORTHO05D008889 7.4e-25 117.9 141 46.1
BcaB07g31750 Brassica carinata HOM05D002799 ORTHO05D008889 9.6e-25 117.5 136 47.8
A09p11140 Brassica napus HOM05D002799 ORTHO05D008889 9.6e-25 117.5 136 47.8
Carub.0003s3061 Capsella rubella HOM05D002799 ORTHO05D008889 9.6e-25 117.5 136 47.1
FvH4_7g33591 Fragaria vesca HOM05D002799 ORTHO05D008889 9.6e-25 117.5 130 46.2
FAN03G1078 Fragaria x ananassa HOM05D002799 ORTHO05D007076 1.3e-24 117.1 130 46.9
QL09p025834 Quercus lobata HOM05D002799 ORTHO05D008889 1.3e-24 117.1 128 48.4
FvH4_7g33580 Fragaria vesca HOM05D002799 ORTHO05D008889 1.6e-24 116.7 130 46.2
BraA09t36756Z Brassica rapa HOM05D002799 ORTHO05D008889 2.1e-24 116.3 136 47.1
FAN10G0267 Fragaria x ananassa HOM05D002799 ORTHO05D007076 2.1e-24 116.3 130 46.9
Oeu053393.1 Olea europaea HOM05D002799 ORTHO05D008889 2.1e-24 116.3 128 49.2
PGR004G1571 Punica granatum HOM05D002799 ORTHO05D008889 2.1e-24 116.3 131 50.4
CANSAT21G1155 Cannabis sativa HOM05D002799 ORTHO05D008889 2.8e-24 115.9 130 48.5
CsaV3_5G005340 Cucumis sativus L. HOM05D002799 ORTHO05D008889 2.8e-24 115.9 128 47.7
FAN01G1859 Fragaria x ananassa HOM05D002799 ORTHO05D007076 2.8e-24 115.9 130 46.9
MD07G1305700 Malus domestica HOM05D002799 ORTHO05D008889 3.7e-24 115.5 130 47.7
TWI60G0329 Tripterygium wilfordii HOM05D002799 ORTHO05D008889 3.7e-24 115.5 124 52.4
MSTRG.17884 Avicennia marina HOM05D002799 ORTHO05D008889 4.8e-24 115.2 128 47.7
arahy.Tifrunner.gnm1.ann1.LMI616 Arachis hypogaea HOM05D002799 ORTHO05D008889 6.2e-24 114.8 129 46.5
Glyma.18G134600 Glycine max HOM05D002799 ORTHO05D008889 6.2e-24 114.8 128 43.0
Nitab4.5_0002229g0090 Nicotiana tabacum HOM05D002799 ORTHO05D008889 8.1e-24 114.4 121 47.1
Glyma.08G289900 Glycine max HOM05D002799 ORTHO05D008889 1.1e-23 114.0 128 43.8
Atru.chr12.2012 Acer truncatum HOM05D002799 ORTHO05D008889 1.4e-23 113.6 137 43.8
DCAR_010548 Daucus carota HOM05D002799 ORTHO05D008889 1.4e-23 113.6 121 47.1
Nitab4.5_0000207g0420 Nicotiana tabacum HOM05D002799 ORTHO05D008889 1.4e-23 113.6 128 46.1
Psat4g127040 Pisum sativum HOM05D002799 ORTHO05D008889 1.4e-23 113.6 128 44.5
Lj1P1032T28 Lonicera japonica HOM05D002799 ORTHO05D008889 1.8e-23 113.2 131 47.3
Aa31LG8G14030 Aethionema arabicum HOM05D002799 ORTHO05D008889 2.4e-23 112.8 129 47.3
arahy.Tifrunner.gnm1.ann1.10QB4Z Arachis hypogaea HOM05D002799 ORTHO05D008889 2.4e-23 112.8 129 46.5
arahy.Tifrunner.gnm1.ann1.31RF02 Arachis hypogaea HOM05D002799 ORTHO05D008889 3.1e-23 112.5 129 46.5
Ciclev10032834m.g Citrus clementina HOM05D002799 ORTHO05D008889 3.1e-23 112.5 124 47.6
Lj4g0019925 Lotus japonicus HOM05D002799 ORTHO05D008889 4.0e-23 112.1 128 45.3
TPR.G26908 Trifolium pratense HOM05D002799 ORTHO05D008889 4.0e-23 112.1 121 46.3
Lalb_Chr09g0335071 Lupinus albus HOM05D002799 ORTHO05D008889 5.3e-23 111.7 128 43.8
AT2G16790 Arabidopsis thaliana HOM05D002799 ORTHO05D008889 6.9e-23 111.3 129 48.8
arahy.Tifrunner.gnm1.ann1.B4EAVD Arachis hypogaea HOM05D002799 ORTHO05D008889 6.9e-23 111.3 129 45.7
MELO3C005426.2 Cucumis melo HOM05D002799 ORTHO05D008889 9.0e-23 110.9 135 43.7
Thhalv10022876m.g Eutrema salsugineum HOM05D002799 ORTHO05D008889 2.0e-22 109.8 130 49.2
CARHR107040 Cardamine hirsuta HOM05D002799 ORTHO05D008889 2.6e-22 109.4 129 47.3
Sp3g29930 Schrenkiella parvula HOM05D002799 ORTHO05D008889 2.6e-22 109.4 130 47.7
unitig_746.g26651 Utricularia gibba HOM05D002799 ORTHO05D008889 4.5e-22 108.6 141 41.1
AUR62028150 Chenopodium quinoa HOM05D002799 ORTHO05D008889 7.6e-22 107.8 133 43.6
ECA236G2689 Erigeron canadensis HOM05D002799 ORTHO05D008889 7.6e-22 107.8 129 45.0
EL10Ac3g05099 Beta vulgaris HOM05D002799 ORTHO05D008889 2.9e-21 105.9 128 45.3
Ah.04g157280 Amaranthus hybridus HOM05D002799 ORTHO05D008889 6.4e-21 104.8 117 46.2
Os06g0114650 Oryza sativa ssp. japonica HOM05D002799 ORTHO05D008889 1.4e-20 103.6 124 43.5
ATR0829G224 Amborella trichopoda HOM05D002799 ORTHO05D008889 9.3e-20 100.9 153 39.2
Lsat_1_v5_gn_5_146100 Lactuca sativa HOM05D002799 ORTHO05D008889 2.7e-19 99.4 131 43.5
Rhsim03G0164800 Rhododendron simsii HOM05D002799 ORTHO05D008889 2.7e-19 99.4 104 50.0
Lsat_1_v5_gn_8_74380 Lactuca sativa HOM05D002799 ORTHO05D008889 1.0e-18 97.4 130 41.5
AagrBONN_evm.TU.Sc2ySwM_362.1504 Anthoceros agrestis HOM05D002799 ORTHO05D008889 1.1e-17 94.0 150 37.3
Solyc10g006600.4 Solanum lycopersicum HOM05D002799 ORTHO05D008889 1.1e-17 94.0 93 51.6
PSO675G5486 Papaver somniferum HOM05D002799 ORTHO05D008889 6.2e-16 88.2 151 37.1
SMO174G0264 Selaginella moellendorffii HOM05D002799 ORTHO05D008889 1.1e-15 87.4 138 39.9
PSO717G0064 Papaver somniferum HOM05D002799 ORTHO05D008889 1.8e-15 86.7 140 40.0
Mapoly0046s0106 Marchantia polymorpha HOM05D002799 ORTHO05D008889 5.8e-14 81.6 129 41.1
BcaB03g16409 Brassica carinata HOM05D002799 ORTHO05D008889 2.9e-13 79.3 92 48.9
HPP92_002455 Vanilla planifolia HOM05D002799 ORTHO05D008889 3.8e-13 79.0 89 47.2
PSO675G4133 Papaver somniferum HOM05D002799 ORTHO05D008889 2.7e-11 72.8 152 31.6
Pp3c5_2750 Physcomitrium patens HOM05D002799 ORTHO05D008889 7.9e-11 71.2 153 32.7
C07p06790 Brassica napus HOM05D002799 ORTHO05D008889 3.3e-09 65.9 70 50.0
MD01G1233600 Malus domestica HOM05D002799 ORTHO05D008889 1.5e-06 57.0 55 45.5
MCO08G110 Micromonas commoda HOM05D002799 ORTHO05D008889 1.5e-06 57.0 108 34.3
Cre08.g385750 Chlamydomonas reinhardtii HOM05D002799 ORTHO05D008889 3.4e-06 55.8 129 31.8


User provided reference genes

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