Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI03392 Sapria himalayana HOM05D005825 ORTHO05D006483 4.4e-217 757.7 383 100.0
Sabra02G0094300 Salix brachista HOM05D005825 ORTHO05D006483 7.7e-113 411.4 382 57.9
DCAR_017816 Daucus carota HOM05D005825 ORTHO05D006483 1.2e-110 404.1 382 57.3
Cpa.g.sc75.29 Carica papaya HOM05D005825 ORTHO05D006483 2.1e-110 403.3 387 56.6
Manes.06G058801 Manihot esculenta HOM05D005825 ORTHO05D006483 2.7e-110 402.9 385 56.1
Sabra14G0011800 Salix brachista HOM05D005825 ORTHO05D006483 4.7e-110 402.1 382 57.3
Lj2C942T8 Lonicera japonica HOM05D005825 ORTHO05D006483 1.0e-109 401.0 388 57.2
Atru.chr7.1162 Acer truncatum HOM05D005825 ORTHO05D006483 2.3e-109 399.8 383 55.1
Potri.014G017900 Populus trichocarpa HOM05D005825 ORTHO05D006483 8.8e-109 397.9 384 56.8
AT2G26680 Arabidopsis thaliana HOM05D005825 ORTHO05D006483 2.8e-107 392.9 387 55.0
Lj2A929T15 Lonicera japonica HOM05D005825 ORTHO05D006483 4.8e-107 392.1 388 56.2
AL4G19680 Arabidopsis lyrata HOM05D005825 ORTHO05D006483 1.1e-106 391.0 387 54.5
vmacro20556 Vaccinium macrocarpon HOM05D005825 ORTHO05D006483 1.4e-106 390.6 384 54.2
Ca_21683_v3 Cicer arietinum L. HOM05D005825 ORTHO05D006483 1.8e-106 390.2 385 55.8
Ciclev10008932m.g Citrus clementina HOM05D005825 ORTHO05D006483 1.8e-106 390.2 385 55.3
Aa31LG5G9110 Aethionema arabicum HOM05D003776 ORTHO05D004459 4.1e-106 389.0 387 54.5
Sed0008025 Sechium edule HOM05D005825 ORTHO05D006483 5.4e-106 388.7 384 54.9
Gohir.D06G054601 Gossypium hirsutum HOM05D005825 ORTHO05D006483 9.1e-106 387.9 385 55.3
Gorai.010G064100 Gossypium raimondii HOM05D005825 ORTHO05D006483 9.1e-106 387.9 385 55.3
Duzib168G1077 Durio zibethinus HOM05D005825 ORTHO05D006483 2.7e-105 386.3 385 54.3
Thecc.09G126400 Theobroma cacao HOM05D005825 ORTHO05D006483 4.5e-105 385.6 387 54.0
PGR142G1018 Punica granatum HOM05D005825 ORTHO05D006483 7.7e-105 384.8 389 54.2
Carub.0004s0696 Capsella rubella HOM05D005825 ORTHO05D006483 1.0e-104 384.4 386 54.7
A04p21320 Brassica napus HOM05D005825 ORTHO05D006483 2.2e-104 383.3 390 53.6
BraA04t17698Z Brassica rapa HOM05D005825 ORTHO05D006483 2.2e-104 383.3 390 53.6
Gohir.A06G056101 Gossypium hirsutum HOM05D005825 ORTHO05D006483 3.8e-104 382.5 387 54.3
VMungo1215G3451 Vigna mungo HOM05D005825 ORTHO05D006483 3.8e-104 382.5 383 54.0
CsaV3_2G002850 Cucumis sativus L. HOM05D005825 ORTHO05D006483 6.5e-104 381.7 384 54.9
Sp4g09150 Schrenkiella parvula HOM05D005825 ORTHO05D006483 6.5e-104 381.7 388 53.6
Hund09127 Selenicereus undatus HOM05D005825 ORTHO05D006483 8.5e-104 381.3 385 54.8
DCAR_009187 Daucus carota HOM05D005825 ORTHO05D006483 1.1e-103 380.9 383 55.4
Thhalv10002044m.g Eutrema salsugineum HOM05D005825 ORTHO05D006483 1.9e-103 380.2 386 53.4
Peaxi162Scf00157g01524 Petunia axillaris HOM05D005825 ORTHO05D006483 1.9e-103 380.2 383 52.7
Lalb_Chr13g0301881 Lupinus albus HOM05D005825 ORTHO05D006483 2.5e-103 379.8 385 55.6
THA.LOC104815280 Tarenaya hassleriana HOM05D005825 ORTHO05D006483 2.5e-103 379.8 389 53.5
ClCG11G003030 Citrullus lanatus HOM05D005825 ORTHO05D006483 3.2e-103 379.4 383 54.3
MELO3C004508.2 Cucumis melo HOM05D005825 ORTHO05D006483 3.2e-103 379.4 384 54.2
Glyma.13G167400 Glycine max HOM05D005825 ORTHO05D006483 4.2e-103 379.0 384 53.6
Sopen12g004430 Solanum pennellii HOM05D005825 ORTHO05D006483 4.2e-103 379.0 383 52.5
EL10Ac8g18654 Beta vulgaris HOM05D005825 ORTHO05D006483 5.5e-103 378.6 384 54.9
Medtr4g114160 Medicago truncatula HOM05D005825 ORTHO05D006483 5.5e-103 378.6 388 54.6
Solyc12g009430.2 Solanum lycopersicum HOM05D005825 ORTHO05D006483 5.5e-103 378.6 383 52.5
BcaB06g28186 Brassica carinata HOM05D005825 ORTHO05D006483 7.2e-103 378.3 385 53.5
SalBow3G4290 Salvia bowleyana HOM05D005825 ORTHO05D006483 7.2e-103 378.3 383 54.0
Dinv36528 Davidia involucrata HOM05D005825 ORTHO05D006483 1.6e-102 377.1 383 54.6
Migut.B01717 Erythranthe guttata HOM05D005825 ORTHO05D006483 2.1e-102 376.7 383 53.0
Psat4g040200 Pisum sativum HOM05D005825 ORTHO05D006483 2.1e-102 376.7 386 54.7
Rhsim01G0070600 Rhododendron simsii HOM05D005825 ORTHO05D006483 2.1e-102 376.7 383 53.3
Eucgr.C01173 Eucalyptus grandis HOM05D005825 ORTHO05D006483 2.7e-102 376.3 386 54.4
Actinidia40470 Actinidia chinensis HOM05D005825 ORTHO05D006483 4.7e-102 375.6 385 53.5
Phvul.003G164300 Phaseolus vulgaris HOM05D005825 ORTHO05D006483 4.7e-102 375.6 385 54.0
CAN.G1591.11 Capsicum annuum HOM05D005825 ORTHO05D006483 6.1e-102 375.2 381 51.2
Rhsim01G0071200 Rhododendron simsii HOM05D005825 ORTHO05D006483 6.1e-102 375.2 388 53.1
arahy.Tifrunner.gnm1.ann1.1NB5KJ Arachis hypogaea HOM05D005825 ORTHO05D006483 1.0e-101 374.4 383 53.5
Lsat_1_v5_gn_8_58680 Lactuca sativa HOM05D005825 ORTHO05D006483 1.0e-101 374.4 383 51.7
C04p57230 Brassica napus HOM05D005825 ORTHO05D006483 1.4e-101 374.0 392 52.3
Lalb_Chr12g0197941 Lupinus albus HOM05D005825 ORTHO05D006483 3.0e-101 372.9 383 54.8
CANSAT11G1244 Cannabis sativa HOM05D005825 ORTHO05D006483 4.0e-101 372.5 383 53.8
Nn2g12789 Nelumbo nucifera HOM05D005825 ORTHO05D006483 6.8e-101 371.7 392 52.0
CSS0027185 Camellia sinensis var. sinensis HOM05D005825 ORTHO05D006483 8.8e-101 371.3 383 52.5
TAR625G0074 Trochodendron aralioides HOM05D005825 ORTHO05D006483 8.8e-101 371.3 385 52.7
arahy.Tifrunner.gnm1.ann1.9UEQ51 Arachis hypogaea HOM05D005825 ORTHO05D006483 1.2e-100 370.9 384 53.1
SGA_v2.0_scaffold299G47720 Striga asiatica HOM05D005825 ORTHO05D006483 1.2e-100 370.9 381 52.8
BolC4t27250H Brassica oleracea HOM05D005825 ORTHO05D006483 3.4e-100 369.4 392 52.0
MSTRG.19597 Avicennia marina HOM05D005825 ORTHO05D006483 4.4e-100 369.0 383 52.7
CSS0017066 Camellia sinensis var. sinensis HOM05D005825 ORTHO05D006483 4.4e-100 369.0 383 52.0
Lj4g0013357 Lotus japonicus HOM05D005825 ORTHO05D006483 9.8e-100 367.9 383 54.0
Cfa003372 Carpinus fangiana HOM05D005825 ORTHO05D006483 1.3e-99 367.5 385 53.0
TWI34G0282 Tripterygium wilfordii HOM05D005825 ORTHO05D006483 1.7e-99 367.1 391 51.9
MD02G1032800 Malus domestica HOM05D005825 ORTHO05D006483 2.2e-99 366.7 385 52.2
Sc08g0006620 Simmondsia chinensis HOM05D005825 ORTHO05D006483 2.8e-99 366.3 386 52.3
BcaC02g08209 Brassica carinata HOM05D005825 ORTHO05D006483 3.7e-99 365.9 386 52.3
Nitab4.5_0014105g0010 Nicotiana tabacum HOM05D005825 ORTHO05D006483 6.3e-99 365.2 374 52.9
Nitab4.5_0002658g0050 Nicotiana tabacum HOM05D005825 ORTHO05D006483 1.4e-98 364.0 374 52.9
Oeu007499.1 Olea europaea HOM05D005825 ORTHO05D006483 1.4e-98 364.0 390 51.5
Aqoxy5G01398 Aquilegia oxysepala HOM05D005825 ORTHO05D006483 9.2e-98 361.3 382 51.6
PGSC0003DMG400002918 Solanum tuberosum HOM05D005825 ORTHO05D006483 9.2e-98 361.3 380 51.3
Hma1.2p1_0018F.1_g012420 Hydrangea macrophylla HOM05D005825 ORTHO05D006483 1.2e-97 360.9 317 58.4
PSO675G5818 Papaver somniferum HOM05D005825 ORTHO05D006483 1.2e-97 360.9 382 50.8
PSO782G3266 Papaver somniferum HOM05D005825 ORTHO05D006483 1.2e-97 360.9 382 50.5
Thhalv10023596m.g Eutrema salsugineum HOM05D005825 ORTHO05D006483 2.7e-97 359.8 389 52.2
Hma1.2p1_2368F.1_g320700 Hydrangea macrophylla HOM05D005825 ORTHO05D006483 2.7e-97 359.8 317 58.0
Prupe.7G242700 Prunus persica HOM05D005825 ORTHO05D006483 5.9e-97 358.6 384 52.1
Ah.09g226210 Amaranthus hybridus HOM05D005825 ORTHO05D006483 7.7e-97 358.2 388 51.3
arahy.Tifrunner.gnm1.ann1.85XGXJ Arachis hypogaea HOM05D005825 ORTHO05D006483 7.7e-97 358.2 384 51.8
MBI16_g24711_MAGBIO Magnolia biondii HOM05D005825 ORTHO05D006483 7.7e-97 358.2 386 50.8
CiPaw.03G244100 Carya illinoinensis HOM05D005825 ORTHO05D006483 1.0e-96 357.8 384 51.3
RcHm_v2.0_Chr2g0088431 Rosa chinensis HOM05D005825 ORTHO05D006483 1.3e-96 357.5 392 52.6
arahy.Tifrunner.gnm1.ann1.R6UVTB Arachis hypogaea HOM05D005825 ORTHO05D006483 1.7e-96 357.1 384 51.8
FAN26G2420 Fragaria x ananassa HOM05D005825 ORTHO05D006483 1.7e-96 357.1 386 52.1
AUR62013360 Chenopodium quinoa HOM05D005825 ORTHO05D006483 2.9e-96 356.3 323 57.3
HanXRQChr17g0537711 Helianthus annuus HOM05D005825 ORTHO05D006483 5.0e-96 355.5 324 57.1
FAN19G0135 Fragaria x ananassa HOM05D005825 ORTHO05D006483 6.6e-96 355.1 385 51.7
HanXRQChr17g0537731 Helianthus annuus HOM05D005825 ORTHO05D006483 6.6e-96 355.1 383 52.0
QL10p023454 Quercus lobata HOM05D005825 ORTHO05D006483 8.6e-96 354.8 508 43.7
FvH4_1g03280 Fragaria vesca HOM05D005825 ORTHO05D006483 1.1e-95 354.4 385 51.4
FAN23G1198 Fragaria x ananassa HOM05D005825 ORTHO05D006483 1.1e-95 354.4 386 51.8
Os03g0566600 Oryza sativa ssp. japonica HOM05D005825 ORTHO05D006483 1.1e-95 354.4 337 56.4
unitig_748.g8100 Utricularia gibba HOM05D005825 ORTHO05D006483 5.6e-95 352.1 384 50.8
CDE04G1080 Ceratophyllum demersum HOM05D005825 ORTHO05D006483 7.3e-95 351.7 384 51.3
FAN28G2006 Fragaria x ananassa HOM05D005825 ORTHO05D006483 1.6e-94 350.5 386 51.6
Zm00001eb043030 Zea mays HOM05D005825 ORTHO05D006483 2.0e-92 343.6 331 55.6
HPP92_017605 Vanilla planifolia HOM05D005825 ORTHO05D006483 4.4e-92 342.4 390 49.2
ATR0225G021 Amborella trichopoda HOM05D005825 ORTHO05D006483 8.6e-88 328.2 320 53.8
HanXRQChr06g0180341 Helianthus annuus HOM05D005825 ORTHO05D006483 7.5e-84 315.1 350 51.1
Haze_25579 Corylus avellana HOM05D005825 ORTHO05D006483 1.4e-82 310.8 376 47.6
AUR62011128 Chenopodium quinoa HOM05D005825 ORTHO05D006483 6.2e-78 295.4 383 46.5
Potri.002G119800 Populus trichocarpa HOM05D005825 ORTHO05D006483 5.4e-74 282.3 251 59.8
SMO147G0115 Selaginella moellendorffii HOM05D005825 ORTHO05D006483 2.5e-71 273.5 315 45.4
AagrBONN_evm.TU.Sc2ySwM_344.1792 Anthoceros agrestis HOM05D005825 ORTHO05D006483 1.8e-69 267.3 325 44.9
ECA246G2031 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.7e-67 259.6 257 54.9
TPR.G10697 Trifolium pratense HOM05D005825 ORTHO05D006483 4.9e-67 259.2 240 57.9
Glyma.17G115000 Glycine max HOM05D005825 ORTHO05D006483 1.1e-61 241.5 233 55.4
CiPaw.04G171000 Carya illinoinensis HOM05D005825 ORTHO05D006483 3.1e-61 240.0 233 54.1
CARHR118580 Cardamine hirsuta HOM05D005825 ORTHO05D006483 4.4e-60 236.1 211 59.7
GSVIVG01015529001 Vitis vinifera HOM05D005825 ORTHO05D006483 5.8e-60 235.7 225 55.1
Cc06_g08520 Coffea canephora HOM05D005825 ORTHO05D006483 2.1e-57 227.3 225 52.9
Ca_13270_v3 Cicer arietinum L. HOM05D005825 ORTHO05D006483 1.4e-45 188.0 190 54.7
CARHR118590 Cardamine hirsuta HOM05D005825 ORTHO05D006483 3.1e-45 186.8 121 70.2
Actinidia21988 Actinidia chinensis HOM05D005825 ORTHO05D006483 5.3e-45 186.0 131 67.9
VMungo0647G0470 Vigna mungo HOM05D005825 ORTHO05D006483 4.9e-43 179.5 142 60.6
Eucgr.G00617 Eucalyptus grandis HOM05D005825 ORTHO05D006483 6.0e-41 172.6 119 68.1
Ca_14592_v3 Cicer arietinum L. HOM05D005825 ORTHO05D006483 1.3e-40 171.4 190 53.2
Eucgr.B02426 Eucalyptus grandis HOM05D005825 ORTHO05D006483 1.5e-39 167.9 119 65.5
Eucgr.C03225 Eucalyptus grandis HOM05D005825 ORTHO05D006483 3.4e-36 156.8 113 64.6
Eucgr.E01840 Eucalyptus grandis HOM05D005825 ORTHO05D006483 1.1e-31 141.7 119 60.5
Eucgr.B02447 Eucalyptus grandis HOM05D005825 ORTHO05D006483 4.8e-30 136.3 95 70.5
TAR381G0761 Trochodendron aralioides HOM05D005825 ORTHO05D006483 1.1e-26 125.2 154 48.7
CAN.G204.2 Capsicum annuum HOM05D005825 ORTHO05D006483 9.4e-18 95.5 71 60.6
SalBow6G2945 Salvia bowleyana HOM05D000060 ORTHO05D000082 1.4e-13 81.6 130 40.0
VMungo0464G1687 Vigna mungo HOM05D005825 ORTHO05D006483 2.5e-10 70.9 50 66.0


User provided reference genes

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