Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI03058 Sapria himalayana HOM05D004945 ORTHO05D005536 6.8e-110 400.6 190 100.0
CiPaw.10G063900 Carya illinoinensis HOM05D004945 ORTHO05D005536 9.0e-38 161.0 93 77.4
Haze_06091 Corylus avellana HOM05D004945 ORTHO05D005536 4.9e-36 155.2 94 72.3
CiPaw.09G075900 Carya illinoinensis HOM05D004945 ORTHO05D005536 1.4e-35 153.7 89 75.3
Potri.018G142500 Populus trichocarpa HOM05D004945 ORTHO05D005536 1.4e-35 153.7 93 77.4
Manes.06G020000 Manihot esculenta HOM05D004945 ORTHO05D005536 1.6e-34 150.2 89 74.2
Prupe.1G075600 Prunus persica HOM05D004945 ORTHO05D005536 2.1e-34 149.8 89 73.0
MD07G1027600 Malus domestica HOM05D004945 ORTHO05D005536 2.7e-34 149.4 89 73.0
Thecc.09G185900 Theobroma cacao HOM05D004945 ORTHO05D005536 4.6e-34 148.7 89 75.3
Cpa.g.sc95.12 Carica papaya HOM05D004945 ORTHO05D005536 7.9e-34 147.9 93 75.3
Sabra18G0116400 Salix brachista HOM05D004945 ORTHO05D005536 7.9e-34 147.9 88 75.0
MD13G1241900 Malus domestica HOM05D004945 ORTHO05D005536 1.0e-33 147.5 89 73.0
CsaV3_1G031860 Cucumis sativus L. HOM05D004945 ORTHO05D005536 2.3e-33 146.4 156 49.4
TWI34G0510 Tripterygium wilfordii HOM05D004945 ORTHO05D005536 2.3e-33 146.4 93 69.9
COL.COLO4_22793 Corchorus olitorius HOM05D004945 ORTHO05D005536 6.7e-33 144.8 93 71.0
PGR142G1282 Punica granatum HOM05D004945 ORTHO05D005536 6.7e-33 144.8 93 71.0
TWI63G0641 Tripterygium wilfordii HOM05D004945 ORTHO05D005536 8.7e-33 144.4 93 69.9
Actinidia38805 Actinidia chinensis HOM05D004945 ORTHO05D005536 1.5e-32 143.7 93 69.9
TAR625G1304 Trochodendron aralioides HOM05D004945 ORTHO05D005536 1.5e-32 143.7 93 68.8
Phvul.007G156600 Phaseolus vulgaris HOM05D004945 ORTHO05D005536 2.5e-32 142.9 87 69.0
Rhsim08G0249700 Rhododendron simsii HOM05D004945 ORTHO05D005536 2.5e-32 142.9 94 73.4
Atru.chr7.757 Acer truncatum HOM05D004945 ORTHO05D005536 3.3e-32 142.5 87 72.4
Atru.chr7.779 Acer truncatum HOM05D004945 ORTHO05D005536 3.3e-32 142.5 87 72.4
COL.COLO4_08559 Corchorus olitorius HOM05D004945 ORTHO05D005536 3.3e-32 142.5 93 69.9
Hma1.2p1_0517F.1_g170730 Hydrangea macrophylla HOM05D004945 ORTHO05D005536 4.3e-32 142.1 93 71.0
Ciclev10010043m.g Citrus clementina HOM05D004945 ORTHO05D005536 5.7e-32 141.7 89 68.5
Duzib150G1578 Durio zibethinus HOM05D004945 ORTHO05D005536 5.7e-32 141.7 89 70.8
Gohir.D13G212900 Gossypium hirsutum HOM05D004945 ORTHO05D005536 5.7e-32 141.7 89 67.4
Potri.006G075600 Populus trichocarpa HOM05D004945 ORTHO05D005536 5.7e-32 141.7 93 67.7
Sed0015624 Sechium edule HOM05D004945 ORTHO05D005536 5.7e-32 141.7 93 72.0
MELO3C017430.2 Cucumis melo HOM05D004945 ORTHO05D005536 7.4e-32 141.4 93 72.0
FvH4_4g07310 Fragaria vesca HOM05D004945 ORTHO05D005536 7.4e-32 141.4 90 70.0
Gohir.A13G208400 Gossypium hirsutum HOM05D004945 ORTHO05D005536 7.4e-32 141.4 89 69.7
Gohir.D13G212800 Gossypium hirsutum HOM05D004945 ORTHO05D005536 7.4e-32 141.4 89 69.7
Gorai.013G243200 Gossypium raimondii HOM05D004945 ORTHO05D005536 7.4e-32 141.4 89 69.7
RcHm_v2.0_Chr4g0399651 Rosa chinensis HOM05D004945 ORTHO05D005536 7.4e-32 141.4 90 72.2
Sed0005101 Sechium edule HOM05D004945 ORTHO05D005536 7.4e-32 141.4 93 72.0
TAR636G3350 Trochodendron aralioides HOM05D004945 ORTHO05D005536 9.6e-32 141.0 88 68.2
QL11p013920 Quercus lobata HOM05D004945 ORTHO05D005536 1.3e-31 140.6 92 70.7
Solyc06g063310.2 Solanum lycopersicum HOM05D004945 ORTHO05D005536 1.3e-31 140.6 93 68.8
Sopen06g022780 Solanum pennellii HOM05D004945 ORTHO05D005536 1.3e-31 140.6 93 68.8
CANSAT11G0762 Cannabis sativa HOM05D004945 ORTHO05D005536 1.6e-31 140.2 89 69.7
QL11p014429 Quercus lobata HOM05D004945 ORTHO05D005536 1.6e-31 140.2 92 69.6
CSS0028266 Camellia sinensis var. sinensis HOM05D004945 ORTHO05D005536 2.1e-31 139.8 93 66.7
ClCG06G013580 Citrullus lanatus HOM05D004945 ORTHO05D005536 2.1e-31 139.8 93 69.9
Gohir.D08G028100 Gossypium hirsutum HOM05D004945 ORTHO05D005536 2.8e-31 139.4 89 69.7
DCAR_007670 Daucus carota HOM05D004945 ORTHO05D005536 3.7e-31 139.0 89 70.8
Duzib150G0603 Durio zibethinus HOM05D004945 ORTHO05D005536 3.7e-31 139.0 89 68.5
Eucgr.C00118 Eucalyptus grandis HOM05D004945 ORTHO05D005536 3.7e-31 139.0 93 67.7
Gohir.A13G208500 Gossypium hirsutum HOM05D004945 ORTHO05D005536 4.8e-31 138.7 89 66.3
FAN07G0945 Fragaria x ananassa HOM05D004945 ORTHO05D005536 8.2e-31 137.9 90 68.9
Gorai.004G025200 Gossypium raimondii HOM05D004945 ORTHO05D005536 1.1e-30 137.5 89 68.5
CAN.G308.14 Capsicum annuum HOM05D004945 ORTHO05D005536 1.4e-30 137.1 93 67.7
Gohir.A08G017500 Gossypium hirsutum HOM05D004945 ORTHO05D005536 1.4e-30 137.1 89 68.5
PGSC0003DMG400026503 Solanum tuberosum HOM05D004945 ORTHO05D005536 2.4e-30 136.3 93 68.8
Ca_02105_v3 Cicer arietinum L. HOM05D004945 ORTHO05D005536 2.0e-29 133.3 87 67.8
Migut.D00890 Erythranthe guttata HOM05D004945 ORTHO05D005536 2.0e-29 133.3 87 62.1
Nitab4.5_0003757g0090 Nicotiana tabacum HOM05D004945 ORTHO05D005536 2.0e-29 133.3 83 69.9
Glyma.15G165900 Glycine max HOM05D004945 ORTHO05D005536 2.6e-29 132.9 88 65.9
Sc12g0011140 Simmondsia chinensis HOM05D004945 ORTHO05D005536 2.6e-29 132.9 93 66.7
THA.LOC104803956 Tarenaya hassleriana HOM05D004945 ORTHO05D005536 2.6e-29 132.9 93 68.8
THA.LOC104803979 Tarenaya hassleriana HOM05D004945 ORTHO05D005536 2.6e-29 132.9 93 68.8
Aqoxy1G01195 Aquilegia oxysepala HOM05D004945 ORTHO05D005536 4.5e-29 132.1 93 64.5
THA.LOC104820006 Tarenaya hassleriana HOM05D004945 ORTHO05D005536 7.6e-29 131.3 93 65.6
Glyma.09G059600 Glycine max HOM05D004945 ORTHO05D005536 1.0e-28 131.0 93 64.5
Sc15g0001010 Simmondsia chinensis HOM05D004945 ORTHO05D005536 2.9e-28 129.4 93 65.6
ATR0626G412 Amborella trichopoda HOM05D004945 ORTHO05D005536 3.8e-28 129.0 88 65.9
Cc04_g00230 Coffea canephora HOM05D004945 ORTHO05D005536 1.4e-27 127.1 87 63.2
Psat1g144160 Pisum sativum HOM05D004945 ORTHO05D005536 7.2e-27 124.8 87 63.2
TPR.G7575 Trifolium pratense HOM05D004945 ORTHO05D005536 9.3e-27 124.4 87 62.1
BcaB03g12628 Brassica carinata HOM05D004945 ORTHO05D005536 1.2e-26 124.0 93 61.3
Psat1g144120 Pisum sativum HOM05D004945 ORTHO05D005536 1.2e-26 124.0 87 63.2
CARHR237930 Cardamine hirsuta HOM05D004945 ORTHO05D005536 1.6e-26 123.6 93 62.4
CDE04G2745 Ceratophyllum demersum HOM05D004945 ORTHO05D005536 1.6e-26 123.6 89 65.2
Hma1.2p1_1111F.1_g258380 Hydrangea macrophylla HOM05D004945 ORTHO05D005536 2.1e-26 123.2 93 64.5
Lj6g0012502 Lotus japonicus HOM05D004945 ORTHO05D005536 2.1e-26 123.2 88 61.4
QL11p013931 Quercus lobata HOM05D004945 ORTHO05D005536 3.5e-26 122.5 92 63.0
Lsat_1_v5_gn_1_39460 Lactuca sativa HOM05D004945 ORTHO05D005536 4.6e-26 122.1 93 60.2
THA.LOC104814658 Tarenaya hassleriana HOM05D004945 ORTHO05D005536 4.6e-26 122.1 93 63.4
BcaC01g01207 Brassica carinata HOM05D004945 ORTHO05D005536 6.1e-26 121.7 93 60.2
A08p19460 Brassica napus HOM05D004945 ORTHO05D005536 6.1e-26 121.7 93 60.2
C03p88960 Brassica napus HOM05D004945 ORTHO05D005536 6.1e-26 121.7 93 60.2
BolC3t21206H Brassica oleracea HOM05D004945 ORTHO05D005536 6.1e-26 121.7 93 60.2
BraA08t33908Z Brassica rapa HOM05D004945 ORTHO05D005536 6.1e-26 121.7 93 60.2
Carub.0007s1064 Capsella rubella HOM05D004945 ORTHO05D005536 6.1e-26 121.7 93 61.3
unitig_748.g8030 Utricularia gibba HOM05D004945 ORTHO05D005536 7.9e-26 121.3 93 61.3
Aa31LG2G20550 Aethionema arabicum HOM05D004945 ORTHO05D005536 1.0e-25 120.9 90 61.1
MD10G1108200 Malus domestica HOM05D004945 ORTHO05D005536 1.0e-25 120.9 89 62.9
Sp7g27810 Schrenkiella parvula HOM05D004945 ORTHO05D005536 1.0e-25 120.9 93 60.2
PSO063G0987 Papaver somniferum HOM05D004945 ORTHO05D005536 1.3e-25 120.6 87 62.1
AL7G22230 Arabidopsis lyrata HOM05D004945 ORTHO05D005536 1.8e-25 120.2 93 60.2
arahy.Tifrunner.gnm1.ann1.M8DR4H Arachis hypogaea HOM05D004945 ORTHO05D005536 1.8e-25 120.2 91 58.2
arahy.Tifrunner.gnm1.ann1.ZYC9F0 Arachis hypogaea HOM05D004945 ORTHO05D005536 1.8e-25 120.2 91 58.2
QL11p014451 Quercus lobata HOM05D004945 ORTHO05D005536 1.8e-25 120.2 92 62.0
AT4G30010 Arabidopsis thaliana HOM05D004945 ORTHO05D005536 2.3e-25 119.8 93 59.1
Ah.13g075140 Amaranthus hybridus HOM05D004945 ORTHO05D005536 3.0e-25 119.4 89 61.8
Migut.I01191 Erythranthe guttata HOM05D004945 ORTHO05D005536 3.0e-25 119.4 87 60.9
PSO170G0997 Papaver somniferum HOM05D004945 ORTHO05D005536 3.0e-25 119.4 87 60.9
unitig_32.g11008 Utricularia gibba HOM05D004945 ORTHO05D005536 3.9e-25 119.0 88 59.1
BcaNung00508 Brassica carinata HOM05D004945 ORTHO05D005536 5.1e-25 118.6 93 60.2
Aqoxy7G02794 Aquilegia oxysepala HOM05D004945 ORTHO05D005536 6.7e-25 118.2 94 60.6
Thhalv10026677m.g Eutrema salsugineum HOM05D004945 ORTHO05D005536 6.7e-25 118.2 93 61.3
THA.LOC104811777 Tarenaya hassleriana HOM05D004945 ORTHO05D005536 8.7e-25 117.9 91 60.4
A03p59370 Brassica napus HOM05D004945 ORTHO05D005536 1.5e-24 117.1 93 60.2
C07p57400 Brassica napus HOM05D004945 ORTHO05D005536 1.5e-24 117.1 93 60.2
BolC7t46209H Brassica oleracea HOM05D004945 ORTHO05D005536 1.5e-24 117.1 93 60.2
BraA03t14994Z Brassica rapa HOM05D004945 ORTHO05D005536 1.5e-24 117.1 93 60.2
AUR62018340 Chenopodium quinoa HOM05D004945 ORTHO05D005536 1.5e-24 117.1 89 60.7
AUR62044702 Chenopodium quinoa HOM05D004945 ORTHO05D005536 1.5e-24 117.1 89 60.7
AUR62044703 Chenopodium quinoa HOM05D004945 ORTHO05D005536 1.5e-24 117.1 89 60.7
Medtr2g037990 Medicago truncatula HOM05D004945 ORTHO05D005536 1.9e-24 116.7 87 57.5
AUR62030327 Chenopodium quinoa HOM05D004945 ORTHO05D005536 3.3e-24 115.9 85 63.5
Lalb_Chr11g0074741 Lupinus albus HOM05D004945 ORTHO05D005536 3.3e-24 115.9 93 55.9
Ah.04g153390 Amaranthus hybridus HOM05D004945 ORTHO05D005536 5.7e-24 115.2 89 59.6
EL10Ac3g07227 Beta vulgaris HOM05D004945 ORTHO05D005536 7.4e-24 114.8 89 58.4
AUR62031980 Chenopodium quinoa HOM05D004945 ORTHO05D005536 3.7e-23 112.5 80 62.5
AUR62023991 Chenopodium quinoa HOM05D004945 ORTHO05D005536 1.1e-22 110.9 89 57.3
THA.LOC109116878 Tarenaya hassleriana HOM05D004945 ORTHO05D005536 2.9e-20 102.8 64 73.4
Dinv25512 Davidia involucrata HOM05D004945 ORTHO05D005536 1.9e-19 100.1 68 69.1
ECA247G2100 Erigeron canadensis HOM05D004945 ORTHO05D005536 5.1e-17 92.0 88 46.6
A01p08110 Brassica napus HOM05D004945 ORTHO05D005536 2.0e-16 90.1 85 48.2
Os02g0175800 Oryza sativa ssp. japonica HOM05D004945 ORTHO05D005536 3.3e-16 89.4 91 49.5
Nitab4.5_0006750g0010 Nicotiana tabacum HOM05D004945 ORTHO05D005536 3.7e-15 85.9 57 61.4
BcaB03g15243 Brassica carinata HOM05D004945 ORTHO05D005536 2.4e-14 83.2 76 48.7
Nitab4.5_0000617g0120 Nicotiana tabacum HOM05D004945 ORTHO05D005536 9.1e-14 81.3 60 58.3
HanXRQChr15g0497481 Helianthus annuus HOM05D004945 ORTHO05D005536 1.5e-13 80.5 60 56.7
PGSC0003DMG400028757 Solanum tuberosum HOM05D004945 ORTHO05D005536 2.0e-13 80.1 59 57.6
SMO361G0023 Selaginella moellendorffii HOM05D004945 ORTHO05D005536 3.4e-13 79.3 81 45.7
arahy.Tifrunner.gnm1.ann1.2FH55K Arachis hypogaea HOM05D004945 ORTHO05D005536 5.0e-12 75.5 57 59.6
arahy.Tifrunner.gnm1.ann1.U71V3Q Arachis hypogaea HOM05D004945 ORTHO05D005536 5.0e-12 75.5 57 59.6
Oeu001819.1 Olea europaea HOM05D004945 ORTHO05D005536 3.6e-10 69.3 80 45.0
GSVIVG01010862001 Vitis vinifera HOM05D004945 ORTHO05D005536 1.4e-09 67.4 64 43.8
Nitab4.5_0002354g0060 Nicotiana tabacum HOM05D004945 ORTHO05D005536 8.8e-09 64.7 45 60.0
AagrBONN_evm.TU.Sc2ySwM_344.4974 Anthoceros agrestis HOM05D004945 ORTHO05D005536 1.1e-08 64.3 81 38.3
Nn8g40786 Nelumbo nucifera HOM05D004945 ORTHO05D005536 1.1e-08 64.3 44 54.5
Pp3c25_5460 Physcomitrium patens HOM05D004945 ORTHO05D005536 2.2e-07 60.1 84 39.3
Pp3c25_5480 Physcomitrium patens HOM05D004945 ORTHO05D005536 2.2e-07 60.1 84 39.3
Pp3c5_15280 Physcomitrium patens HOM05D004945 ORTHO05D005536 2.8e-07 59.7 80 35.0
Pp3c5_15650 Physcomitrium patens HOM05D004945 ORTHO05D005536 3.7e-07 59.3 84 38.1
BcaC09g51779 Brassica carinata HOM05D004945 ORTHO05D005536 6.3e-07 58.5 71 39.4
BcaNung06654 Brassica carinata HOM05D004945 ORTHO05D005536 6.3e-07 58.5 71 39.4
CBR_g50842 Chara braunii HOM05D004945 ORTHO05D005536 6.3e-07 58.5 88 39.8
Mapoly0011s0061 Marchantia polymorpha HOM05D004945 ORTHO05D005536 1.8e-06 57.0 87 37.9
Dinv24096 Davidia involucrata HOM05D019947 ORTHO05D005536 7.0e-06 55.1 43 51.2
Dinv44937 Davidia involucrata HOM05D004945 ORTHO05D005536 7.0e-06 55.1 43 51.2


User provided reference genes

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