Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI03004 Sapria himalayana HOM05D000624 ORTHO05D000495 1.4e-113 412.9 201 100.0
SHI28431 Sapria himalayana HOM05D000624 ORTHO05D000495 5.3e-20 102.1 100 58.0
SHI03005 Sapria himalayana HOM05D000854 ORTHO05D000778 7.1e-17 91.7 87 56.3
SHI37002 Sapria himalayana HOM05D000624 ORTHO05D000495 1.6e-16 90.5 109 52.3
SHI35575 Sapria himalayana HOM05D000624 ORTHO05D000495 7.8e-16 88.2 98 51.0
SHI37644 Sapria himalayana HOM05D000624 ORTHO05D000495 7.8e-16 88.2 100 52.0
SHI46337 Sapria himalayana HOM05D000624 ORTHO05D000495 7.3e-14 81.6 107 52.3
SHI20997 Sapria himalayana HOM05D000624 ORTHO05D000495 2.1e-13 80.1 98 55.1
SHI29337 Sapria himalayana HOM05D000624 ORTHO05D000495 2.4e-12 76.6 100 49.0
SHI33136 Sapria himalayana HOM05D000624 ORTHO05D000495 3.1e-12 76.3 106 50.9
SHI17792 Sapria himalayana HOM05D000624 ORTHO05D000495 5.3e-12 75.5 93 52.7
SHI51244 Sapria himalayana HOM05D000624 ORTHO05D000495 5.3e-12 75.5 52 69.2
TAR099G0005 Trochodendron aralioides HOM05D000002 ORTHO05D000001 2.6e-11 73.2 60 58.3
SHI43496 Sapria himalayana HOM05D000624 ORTHO05D000495 3.4e-11 72.8 94 53.2
SHI40830 Sapria himalayana HOM05D000624 ORTHO05D000495 4.5e-11 72.4 100 47.0
SHI52067 Sapria himalayana HOM05D000624 ORTHO05D000495 4.5e-11 72.4 106 49.1
SHI53858 Sapria himalayana HOM05D000624 ORTHO05D000495 4.5e-11 72.4 85 50.6
COL.COLO4_38540 Corchorus olitorius HOM05D026776 ORTHO05D000001 7.6e-11 71.6 52 57.7
Eucgr.E02344 Eucalyptus grandis HOM05D000002 ORTHO05D000001 7.6e-11 71.6 64 57.8
Hma1.2p1_0577F.1_g182200 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 7.6e-11 71.6 71 50.7
TAR301G0003 Trochodendron aralioides HOM05D000002 ORTHO05D000001 7.6e-11 71.6 67 49.3
Migut.K01257 Erythranthe guttata HOM05D000002 ORTHO05D000001 2.2e-10 70.1 60 55.0
Migut.H01198 Erythranthe guttata HOM05D000002 ORTHO05D000001 3.8e-10 69.3 82 46.3
Psat0s454g0080 Pisum sativum HOM05D000002 ORTHO05D000001 3.8e-10 69.3 83 41.0
Atru.chr4.1289 Acer truncatum HOM05D000002 ORTHO05D000001 8.4e-10 68.2 107 41.1
Rhsim05G0182900 Rhododendron simsii HOM05D000002 ORTHO05D000001 8.4e-10 68.2 63 54.0
Atru.chr4.3156 Acer truncatum HOM05D000002 ORTHO05D000001 1.1e-09 67.8 54 53.7
Atru.chr7.838 Acer truncatum HOM05D000002 ORTHO05D000001 1.1e-09 67.8 63 57.1
Migut.F01590 Erythranthe guttata HOM05D000002 ORTHO05D000001 1.4e-09 67.4 67 52.2
Hma1.2p1_0602F.1_g187610 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.4e-09 67.4 64 51.6
Psat1g154000 Pisum sativum HOM05D000002 ORTHO05D000001 1.9e-09 67.0 83 39.8
Rhsim02G0160900 Rhododendron simsii HOM05D000002 ORTHO05D000001 2.4e-09 66.6 61 54.1
Atru.chr6.1164 Acer truncatum HOM05D000002 ORTHO05D000001 3.2e-09 66.2 83 42.2
Lj2g0024035 Lotus japonicus HOM05D000002 ORTHO05D000001 4.2e-09 65.9 60 48.3
Nitab4.5_0000905g0060 Nicotiana tabacum HOM05D000002 ORTHO05D000001 5.4e-09 65.5 70 42.9
TPR.G7779 Trifolium pratense HOM05D000002 ORTHO05D000001 1.2e-08 64.3 55 54.5
Eucgr.H00940 Eucalyptus grandis HOM05D000002 ORTHO05D000001 1.6e-08 63.9 61 52.5
SHI12334 Sapria himalayana HOM05D000624 ORTHO05D000495 1.6e-08 63.9 52 65.4
SHI29410 Sapria himalayana HOM05D000624 ORTHO05D000495 1.6e-08 63.9 51 66.7
CAN.G741.25 Capsicum annuum HOM05D013392 ORTHO05D000001 2.1e-08 63.5 49 55.1
Hma1.2p1_0462F.1_g158010 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.1e-08 63.5 53 58.5
Sopen12g010660 Solanum pennellii HOM05D000002 ORTHO05D000001 2.7e-08 63.2 171 28.7
VMungo0540G0563 Vigna mungo HOM05D000002 ORTHO05D000001 2.7e-08 63.2 62 53.2
Atru.chr6.233 Acer truncatum HOM05D000002 ORTHO05D000001 4.6e-08 62.4 57 45.6
Migut.D01554 Erythranthe guttata HOM05D000002 ORTHO05D000001 4.6e-08 62.4 58 53.4
Psat7g227320 Pisum sativum HOM05D000002 ORTHO05D000001 4.6e-08 62.4 81 37.0
Duzib235G0480 Durio zibethinus HOM05D000002 ORTHO05D000001 6.0e-08 62.0 61 50.8
Hma1.2p1_0018F.1_g012350 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 6.0e-08 62.0 60 48.3
Nitab4.5_0007044g0010 Nicotiana tabacum HOM05D000002 ORTHO05D000001 6.0e-08 62.0 61 50.8
THA.LOC104807900 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 6.0e-08 62.0 44 63.6
VMungo1309G3040 Vigna mungo HOM05D000002 ORTHO05D000001 6.0e-08 62.0 62 51.6
Migut.G01154 Erythranthe guttata HOM05D000002 ORTHO05D000001 7.9e-08 61.6 58 39.7
CSS0000520 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.0e-07 61.2 47 61.7
CAN.G134.31 Capsicum annuum HOM05D000085 ORTHO05D006184 1.0e-07 61.2 51 51.0
Sopen05g011750 Solanum pennellii HOM05D000002 ORTHO05D000001 1.3e-07 60.8 65 44.6
Sopen12g023510 Solanum pennellii HOM05D000002 ORTHO05D000001 1.3e-07 60.8 65 44.6
TPR.G8161 Trifolium pratense HOM05D000002 ORTHO05D000001 1.3e-07 60.8 63 42.9
Atru.chr13.1786 Acer truncatum HOM05D000002 ORTHO05D000001 2.3e-07 60.1 60 45.0
Actinidia35992 Actinidia chinensis HOM05D000002 ORTHO05D000001 2.3e-07 60.1 59 50.8
COL.COLO4_16378 Corchorus olitorius HOM05D000002 ORTHO05D000001 2.3e-07 60.1 57 47.4
COL.COLO4_24669 Corchorus olitorius HOM05D014020 ORTHO05D000001 2.3e-07 60.1 51 49.0
ECA248G1171 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.3e-07 60.1 44 61.4
Hma1.2p1_1940F.1_g308370 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 3.0e-07 59.7 47 57.4
Psat7g220520 Pisum sativum HOM05D000002 ORTHO05D000001 3.0e-07 59.7 55 47.3
Atru.chr2.2580 Acer truncatum HOM05D000002 ORTHO05D000001 3.9e-07 59.3 43 62.8
SHI48397 Sapria himalayana HOM05D000624 ORTHO05D000495 3.9e-07 59.3 47 70.2
Sopen03g025020 Solanum pennellii HOM05D007487 ORTHO05D008561 3.9e-07 59.3 64 42.2
Sopen11g003490 Solanum pennellii HOM05D000002 ORTHO05D000001 3.9e-07 59.3 51 51.0
CSS0044431 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.1e-07 58.9 42 61.9
COL.COLO4_37640 Corchorus olitorius HOM05D000002 ORTHO05D000001 5.1e-07 58.9 61 49.2
Migut.E01660 Erythranthe guttata HOM05D000002 ORTHO05D000001 5.1e-07 58.9 74 35.1
Psat2g152960 Pisum sativum HOM05D000002 ORTHO05D000001 5.1e-07 58.9 62 50.0
Psat6g102280 Pisum sativum HOM05D000002 ORTHO05D000001 5.1e-07 58.9 62 50.0
Psat7g134120 Pisum sativum HOM05D000002 ORTHO05D000001 5.1e-07 58.9 62 50.0
Atru.chr8.532 Acer truncatum HOM05D000002 ORTHO05D000001 6.7e-07 58.5 56 46.4
Eucgr.L00647 Eucalyptus grandis HOM05D000002 ORTHO05D000001 6.7e-07 58.5 64 50.0
Psat5g305960 Pisum sativum HOM05D000002 ORTHO05D000001 6.7e-07 58.5 62 50.0
Sopen04g009020 Solanum pennellii HOM05D000002 ORTHO05D000001 6.7e-07 58.5 106 30.2
TWI59G0793 Tripterygium wilfordii HOM05D000002 ORTHO05D000001 6.7e-07 58.5 64 43.8
Atru.chr6.358 Acer truncatum HOM05D000002 ORTHO05D000001 8.7e-07 58.2 56 44.6
COL.COLO4_08663 Corchorus olitorius HOM05D014020 ORTHO05D000001 8.7e-07 58.2 53 45.3
Sopen01g025080 Solanum pennellii HOM05D000002 ORTHO05D000001 8.7e-07 58.2 44 59.1
Sopen02g037750 Solanum pennellii HOM05D000002 ORTHO05D000001 8.7e-07 58.2 44 59.1
Sopen07g004360 Solanum pennellii HOM05D000002 ORTHO05D000001 8.7e-07 58.2 44 59.1
Sopen07g006410 Solanum pennellii HOM05D000002 ORTHO05D000001 8.7e-07 58.2 44 59.1
Sopen07g029680 Solanum pennellii HOM05D000002 ORTHO05D000001 8.7e-07 58.2 44 59.1
Sopen07g031580 Solanum pennellii HOM05D000002 ORTHO05D000001 8.7e-07 58.2 44 59.1
Sopen08g004430 Solanum pennellii HOM05D000002 ORTHO05D000001 8.7e-07 58.2 44 59.1
Sopen10g024730 Solanum pennellii HOM05D000002 ORTHO05D000001 8.7e-07 58.2 44 59.1
Sopen11g013630 Solanum pennellii HOM05D000002 ORTHO05D000001 8.7e-07 58.2 44 59.1
Sopen12g022570 Solanum pennellii HOM05D000002 ORTHO05D000001 8.7e-07 58.2 44 59.1
SHI20840 Sapria himalayana HOM05D000624 ORTHO05D364646 1.1e-06 57.8 91 47.3
TWI77G0605 Tripterygium wilfordii HOM05D000002 ORTHO05D000001 1.1e-06 57.8 59 45.8
CSS0038576 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.9e-06 57.0 44 59.1
CSS0045539 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.9e-06 57.0 44 59.1
Ciclev10006756m.g Citrus clementina HOM05D047940 ORTHO05D000001 1.9e-06 57.0 59 47.5
Gorai.013G092800 Gossypium raimondii HOM05D000002 ORTHO05D000001 1.9e-06 57.0 61 45.9
Hma1.2p1_0200F.1_g086090 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.9e-06 57.0 53 52.8
SHI50174 Sapria himalayana HOM05D000624 ORTHO05D000495 1.9e-06 57.0 52 59.6
SHI50272 Sapria himalayana HOM05D000624 ORTHO05D000495 1.9e-06 57.0 52 59.6
Sopen04g008990 Solanum pennellii HOM05D000002 ORTHO05D000001 1.9e-06 57.0 51 49.0
ECA236G2928 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.5e-06 56.6 42 66.7
HanXRQChr14g0461191 Helianthus annuus HOM05D000002 ORTHO05D000001 2.5e-06 56.6 60 43.3
Peaxi162Scf00028g00051 Petunia axillaris HOM05D000002 ORTHO05D000001 2.5e-06 56.6 61 39.3
Peaxi162Scf00168g01729 Petunia axillaris HOM05D000002 ORTHO05D000001 2.5e-06 56.6 55 43.6
SHI19969 Sapria himalayana HOM05D000624 ORTHO05D000495 2.5e-06 56.6 49 65.3
SHI35389 Sapria himalayana HOM05D000624 ORTHO05D000495 2.5e-06 56.6 51 60.8
SHI43715 Sapria himalayana HOM05D000624 ORTHO05D000495 2.5e-06 56.6 51 60.8
SHI46574 Sapria himalayana HOM05D000624 ORTHO05D000495 2.5e-06 56.6 51 60.8
SHI49863 Sapria himalayana HOM05D000624 ORTHO05D000495 2.5e-06 56.6 86 45.3
SHI52050 Sapria himalayana HOM05D000624 ORTHO05D000495 2.5e-06 56.6 50 62.0
Sopen09g025260 Solanum pennellii HOM05D000002 ORTHO05D000001 2.5e-06 56.6 44 59.1
ECA238G4695 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.3e-06 56.2 44 56.8
SHI23195 Sapria himalayana HOM05D000624 ORTHO05D000495 3.3e-06 56.2 56 57.1
SHI04633 Sapria himalayana HOM05D000002 ORTHO05D000001 4.3e-06 55.8 118 35.6
FvH4_6g11491 Fragaria vesca HOM05D000002 ORTHO05D000001 5.6e-06 55.5 32 71.9
FvH4_7g19191 Fragaria vesca HOM05D000002 ORTHO05D000001 5.6e-06 55.5 32 71.9
MD09G1100700 Malus domestica HOM05D000002 ORTHO05D000001 5.6e-06 55.5 44 59.1
SHI35144 Sapria himalayana HOM05D000624 ORTHO05D000495 5.6e-06 55.5 46 65.2
SHI44181 Sapria himalayana HOM05D000624 ORTHO05D000495 5.6e-06 55.5 51 58.8
SHI46779 Sapria himalayana HOM05D000624 ORTHO05D000495 5.6e-06 55.5 51 58.8
SHI47955 Sapria himalayana HOM05D000624 ORTHO05D000495 5.6e-06 55.5 51 58.8
SHI53325 Sapria himalayana HOM05D000624 ORTHO05D000495 5.6e-06 55.5 51 58.8
SHI54146 Sapria himalayana HOM05D000624 ORTHO05D000495 5.6e-06 55.5 51 58.8
Sopen03g026440 Solanum pennellii HOM05D000002 ORTHO05D000001 5.6e-06 55.5 99 33.3
CSS0042523 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.4e-06 55.1 62 45.2
CAN.G1177.10 Capsicum annuum HOM05D003289 ORTHO05D004594 7.4e-06 55.1 72 41.7
Nitab4.5_0000485g0090 Nicotiana tabacum HOM05D000002 ORTHO05D000001 7.4e-06 55.1 75 33.3
SHI29703 Sapria himalayana HOM05D000624 ORTHO05D000495 7.4e-06 55.1 52 57.7
Sopen01g012220 Solanum pennellii HOM05D000002 ORTHO05D000001 7.4e-06 55.1 65 41.5
Sopen01g016220 Solanum pennellii HOM05D000002 ORTHO05D000001 7.4e-06 55.1 44 59.1
Sopen02g010030 Solanum pennellii HOM05D000002 ORTHO05D000001 7.4e-06 55.1 70 37.1
Sopen06g017500 Solanum pennellii HOM05D000002 ORTHO05D000001 7.4e-06 55.1 65 41.5
Sopen06g032630 Solanum pennellii HOM05D000002 ORTHO05D000001 7.4e-06 55.1 65 41.5
Atru.chr13.1158 Acer truncatum HOM05D000002 ORTHO05D000001 9.6e-06 54.7 53 49.1
ECA232G1815 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.6e-06 54.7 44 56.8
ECA240G2866 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.6e-06 54.7 44 56.8
ECA248G2841 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.6e-06 54.7 44 56.8
Migut.J01067 Erythranthe guttata HOM05D000002 ORTHO05D000001 9.6e-06 54.7 58 37.9
Manes.05G146201 Manihot esculenta HOM05D016702 ORTHO05D000001 9.6e-06 54.7 50 50.0
Nn8g39601 Nelumbo nucifera HOM05D000002 ORTHO05D000001 9.6e-06 54.7 31 80.6
Nitab4.5_0004600g0030 Nicotiana tabacum HOM05D000002 ORTHO05D000001 9.6e-06 54.7 51 51.0
Peaxi162Scf00063g00071 Petunia axillaris HOM05D000002 ORTHO05D000001 9.6e-06 54.7 55 41.8
SHI29812 Sapria himalayana HOM05D000854 ORTHO05D000495 9.6e-06 54.7 66 48.5
SHI53120 Sapria himalayana HOM05D000624 ORTHO05D000495 9.6e-06 54.7 51 58.8
TPR.G19869 Trifolium pratense HOM05D000002 ORTHO05D000001 9.6e-06 54.7 44 54.5
TPR.G21983 Trifolium pratense HOM05D000002 ORTHO05D000001 9.6e-06 54.7 44 56.8
TPR.G8647 Trifolium pratense HOM05D000002 ORTHO05D000001 9.6e-06 54.7 44 56.8
TWI73G1050 Tripterygium wilfordii HOM05D000002 ORTHO05D000001 9.6e-06 54.7 63 47.6


User provided reference genes

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