Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI03002 Sapria himalayana HOM05D005241 ORTHO05D005862 1.1e-220 769.6 377 100.0
SHI42887 Sapria himalayana HOM05D000854 ORTHO05D005862 1.8e-42 177.6 136 66.2
SHI13360 Sapria himalayana HOM05D000854 ORTHO05D005862 4.5e-41 172.9 177 56.5
Sopen12g007320 Solanum pennellii HOM05D005241 ORTHO05D005862 1.2e-28 131.7 323 31.0
Peaxi162Scf00078g00547 Petunia axillaris HOM05D005241 ORTHO05D005862 2.6e-28 130.6 339 29.8
Solyc12g014440.2 Solanum lycopersicum HOM05D005241 ORTHO05D005862 9.8e-28 128.6 325 31.1
arahy.Tifrunner.gnm1.ann1.4YP8RP Arachis hypogaea HOM05D005241 ORTHO05D005862 1.1e-26 125.2 338 28.4
arahy.Tifrunner.gnm1.ann1.RWXM46 Arachis hypogaea HOM05D005241 ORTHO05D005862 1.4e-26 124.8 315 29.8
Dinv41292 Davidia involucrata HOM05D005241 ORTHO05D005862 1.6e-25 121.3 313 30.0
Ca_21190_v3 Cicer arietinum L. HOM05D005241 ORTHO05D005862 2.7e-25 120.6 346 29.2
Lj9A730T54 Lonicera japonica HOM05D005241 ORTHO05D005862 6.0e-25 119.4 323 28.8
Nn7g37052 Nelumbo nucifera HOM05D005241 ORTHO05D005862 6.0e-25 119.4 318 31.1
MBI18_g28946_MAGBIO Magnolia biondii HOM05D005241 ORTHO05D005862 7.8e-25 119.0 321 30.8
Os07g0516050 Oryza sativa ssp. japonica HOM05D005241 ORTHO05D005862 7.8e-25 119.0 314 30.9
Sabra18G0084300 Salix brachista HOM05D005241 ORTHO05D005862 7.8e-25 119.0 322 29.5
Peaxi162Scf00339g00098 Petunia axillaris HOM05D005241 ORTHO05D005862 1.3e-24 118.2 358 29.1
PGR102G1178 Punica granatum HOM05D005241 ORTHO05D005862 1.3e-24 118.2 317 30.3
Actinidia24021 Actinidia chinensis HOM05D005241 ORTHO05D005862 1.7e-24 117.9 326 30.1
Glyma.13G092800 Glycine max HOM05D005241 ORTHO05D005862 1.7e-24 117.9 311 29.6
Lalb_Chr07g0180171 Lupinus albus HOM05D005241 ORTHO05D005862 1.7e-24 117.9 318 28.0
Psat4g010800 Pisum sativum HOM05D005241 ORTHO05D005862 1.7e-24 117.9 363 28.1
Potri.018G097100 Populus trichocarpa HOM05D005241 ORTHO05D005862 2.3e-24 117.5 322 29.2
Psat4g010840 Pisum sativum HOM05D005241 ORTHO05D005862 3.0e-24 117.1 305 29.5
ATR0796G313 Amborella trichopoda HOM05D005241 ORTHO05D005862 3.9e-24 116.7 325 29.5
PSO384G2580 Papaver somniferum HOM05D005241 ORTHO05D005862 3.9e-24 116.7 315 29.8
QL02p096102 Quercus lobata HOM05D005241 ORTHO05D005862 3.9e-24 116.7 312 29.8
MSTRG.19688 Avicennia marina HOM05D005241 ORTHO05D005862 5.0e-24 116.3 327 30.9
CDE10G0441 Ceratophyllum demersum HOM05D005241 ORTHO05D005862 5.0e-24 116.3 317 28.7
VMungo1215G3242 Vigna mungo HOM05D005241 ORTHO05D005862 5.0e-24 116.3 333 28.5
Haze_22151 Corylus avellana HOM05D005241 ORTHO05D005862 6.6e-24 115.9 315 29.5
Manes.06G028800 Manihot esculenta HOM05D005241 ORTHO05D005862 6.6e-24 115.9 316 29.7
Nitab4.5_0000168g0090 Nicotiana tabacum HOM05D005241 ORTHO05D005862 6.6e-24 115.9 324 29.6
Ciclev10008429m.g Citrus clementina HOM05D005241 ORTHO05D005862 1.1e-23 115.2 316 28.5
Lj4g0014860 Lotus japonicus HOM05D005241 ORTHO05D005862 1.1e-23 115.2 315 28.9
Medtr4g129200 Medicago truncatula HOM05D005241 ORTHO05D005862 1.1e-23 115.2 317 28.4
Phvul.003G150200 Phaseolus vulgaris HOM05D005241 ORTHO05D005862 1.1e-23 115.2 317 28.4
CANSAT11G2449 Cannabis sativa HOM05D005241 ORTHO05D005862 1.5e-23 114.8 325 28.3
Lsat_1_v5_gn_8_65460 Lactuca sativa HOM05D005241 ORTHO05D005862 1.5e-23 114.8 323 28.8
Mapoly0080s0044 Marchantia polymorpha HOM05D005241 ORTHO05D005862 1.9e-23 114.4 348 29.0
TAR629G1464 Trochodendron aralioides HOM05D005241 ORTHO05D005862 1.9e-23 114.4 314 29.9
DCAR_014714 Daucus carota HOM05D005241 ORTHO05D005862 3.3e-23 113.6 305 30.2
TWI34G1734 Tripterygium wilfordii HOM05D005241 ORTHO05D005862 4.3e-23 113.2 317 29.0
vmacro13085 Vaccinium macrocarpon HOM05D005241 ORTHO05D005862 5.6e-23 112.8 317 29.3
Cc06_g13790 Coffea canephora HOM05D005241 ORTHO05D005862 7.3e-23 112.5 327 27.8
PSO135G0726 Papaver somniferum HOM05D005241 ORTHO05D005862 7.3e-23 112.5 314 29.6
HanXRQChr06g0178861 Helianthus annuus HOM05D005241 ORTHO05D005862 9.5e-23 112.1 321 28.3
Gorai.012G095700 Gossypium raimondii HOM05D005241 ORTHO05D005862 1.2e-22 111.7 316 29.7
Medtr4g129180 Medicago truncatula HOM05D005241 ORTHO05D005862 1.2e-22 111.7 303 28.7
Phvul.003G150000 Phaseolus vulgaris HOM05D005241 ORTHO05D005862 1.2e-22 111.7 318 28.3
TWI34G0564 Tripterygium wilfordii HOM05D005241 ORTHO05D005862 1.2e-22 111.7 317 28.4
BolC3t13925H Brassica oleracea HOM05D005241 ORTHO05D005862 1.6e-22 111.3 311 29.9
Rhsim01G0009500 Rhododendron simsii HOM05D005241 ORTHO05D005862 1.6e-22 111.3 328 30.5
Gohir.D04G085700 Gossypium hirsutum HOM05D005241 ORTHO05D005862 2.1e-22 110.9 316 29.7
FAN07G2217 Fragaria x ananassa HOM05D005241 ORTHO05D005862 2.8e-22 110.5 312 28.8
CARHR271450 Cardamine hirsuta HOM05D005241 ORTHO05D005862 3.6e-22 110.2 312 28.2
Gorai.010G053100 Gossypium raimondii HOM05D005241 ORTHO05D005862 3.6e-22 110.2 321 28.3
Lj4g0023001 Lotus japonicus HOM05D005241 ORTHO05D005862 3.6e-22 110.2 327 27.8
FAN17G0752 Fragaria x ananassa HOM05D005241 ORTHO05D005862 4.7e-22 109.8 312 28.8
CSS0029475 Camellia sinensis var. sinensis HOM05D005241 ORTHO05D005862 6.2e-22 109.4 315 29.5
Glyma.17G067600 Glycine max HOM05D005241 ORTHO05D005862 6.2e-22 109.4 315 28.3
Gohir.A05G345818 Gossypium hirsutum HOM05D005241 ORTHO05D005862 6.2e-22 109.4 322 28.6
Gohir.A06G047300 Gossypium hirsutum HOM05D005241 ORTHO05D005862 6.2e-22 109.4 321 28.3
COL.COLO4_16078 Corchorus olitorius HOM05D005241 ORTHO05D005862 8.1e-22 109.0 338 28.4
PSO384G1775 Papaver somniferum HOM05D005241 ORTHO05D005862 1.1e-21 108.6 336 29.5
Atru.chr7.554 Acer truncatum HOM05D005241 ORTHO05D005862 1.4e-21 108.2 314 28.7
A03p12620 Brassica napus HOM05D005241 ORTHO05D005862 1.4e-21 108.2 311 29.6
BraA03t10577Z Brassica rapa HOM05D005241 ORTHO05D005862 1.4e-21 108.2 311 29.6
Nitab4.5_0006743g0030 Nicotiana tabacum HOM05D005241 ORTHO05D005862 1.4e-21 108.2 323 28.2
PSO135G0552 Papaver somniferum HOM05D005241 ORTHO05D005862 1.4e-21 108.2 318 29.6
RcHm_v2.0_Chr4g0404611 Rosa chinensis HOM05D005241 ORTHO05D005862 1.4e-21 108.2 314 28.7
unitig_0.g567 Utricularia gibba HOM05D005241 ORTHO05D005862 1.4e-21 108.2 324 28.7
Duzib150G1634 Durio zibethinus HOM05D005241 ORTHO05D005862 1.8e-21 107.8 318 28.9
SGA_v2.0_scaffold66G22503 Striga asiatica HOM05D005241 ORTHO05D005862 1.8e-21 107.8 315 29.2
C03p14830 Brassica napus HOM05D005241 ORTHO05D005862 2.3e-21 107.5 312 30.1
Gohir.D06G047501 Gossypium hirsutum HOM05D005241 ORTHO05D005862 2.3e-21 107.5 321 28.3
SalBow6G2881 Salvia bowleyana HOM05D005241 ORTHO05D005862 2.3e-21 107.5 324 28.7
COL.COLO4_16080 Corchorus olitorius HOM05D005241 ORTHO05D005862 3.1e-21 107.1 346 28.0
FvH4_4g09810 Fragaria vesca HOM05D005241 ORTHO05D005862 3.1e-21 107.1 312 29.2
FAN12G0682 Fragaria x ananassa HOM05D005241 ORTHO05D005862 3.1e-21 107.1 312 29.2
Thecc.09G163700 Theobroma cacao HOM05D005241 ORTHO05D005862 3.1e-21 107.1 346 28.3
Eucgr.C02440 Eucalyptus grandis HOM05D005241 ORTHO05D005862 4.0e-21 106.7 318 28.9
SEGI_10163 Sequoiadendron giganteum HOM05D005241 ORTHO05D005862 4.0e-21 106.7 317 28.7
AT5G57700 Arabidopsis thaliana HOM05D005241 ORTHO05D005862 5.2e-21 106.3 314 29.6
CiPaw.07G187700 Carya illinoinensis HOM05D005241 ORTHO05D005862 5.2e-21 106.3 318 28.9
Glyma.13G092900 Glycine max HOM05D005241 ORTHO05D005862 5.2e-21 106.3 315 28.3
MD13G1261500 Malus domestica HOM05D005241 ORTHO05D005862 5.2e-21 106.3 357 27.7
PSO135G0092 Papaver somniferum HOM05D005241 ORTHO05D005862 5.2e-21 106.3 336 29.5
SalBow6G2671 Salvia bowleyana HOM05D005241 ORTHO05D005862 5.2e-21 106.3 324 28.4
Hund09015 Selenicereus undatus HOM05D005241 ORTHO05D005862 5.2e-21 106.3 318 29.2
TPR.G5349 Trifolium pratense HOM05D005241 ORTHO05D005862 5.2e-21 106.3 312 27.9
Thecc.09G163500 Theobroma cacao HOM05D005241 ORTHO05D005862 6.8e-21 105.9 325 28.0
Lalb_Chr07g0180161 Lupinus albus HOM05D005241 ORTHO05D005862 8.9e-21 105.5 318 28.6
Thhalv10013983m.g Eutrema salsugineum HOM05D005241 ORTHO05D005862 1.5e-20 104.8 314 29.9
Hund26388 Selenicereus undatus HOM05D005241 ORTHO05D005862 2.0e-20 104.4 306 28.8
AL8G33730 Arabidopsis lyrata HOM05D005241 ORTHO05D005862 2.6e-20 104.0 314 29.6
HPP92_013485 Vanilla planifolia HOM05D005241 ORTHO05D005862 2.6e-20 104.0 319 27.0
EL10Ac8g18255 Beta vulgaris HOM05D005241 ORTHO05D005862 3.4e-20 103.6 310 29.7
Dinv42767 Davidia involucrata HOM05D005241 ORTHO05D005862 3.4e-20 103.6 305 28.9
Dinv43336 Davidia involucrata HOM05D005241 ORTHO05D005862 3.4e-20 103.6 305 28.9
PGSC0003DMG400012851 Solanum tuberosum HOM05D005241 ORTHO05D005862 4.4e-20 103.2 325 27.1
AUR62040288 Chenopodium quinoa HOM05D005241 ORTHO05D005862 5.8e-20 102.8 350 27.7
ClCG06G012960 Citrullus lanatus HOM05D005241 ORTHO05D005862 7.5e-20 102.4 316 28.2
Sp6g19390 Schrenkiella parvula HOM05D005241 ORTHO05D005862 7.5e-20 102.4 314 29.3
EL10Ac8g18254 Beta vulgaris HOM05D005241 ORTHO05D005862 1.7e-19 101.3 319 28.8
ECA236G3445 Erigeron canadensis HOM05D005241 ORTHO05D005862 1.7e-19 101.3 321 27.7
SMO351G0057 Selaginella moellendorffii HOM05D005241 ORTHO05D005862 1.7e-19 101.3 321 28.7
Zm00001eb105910 Zea mays HOM05D005241 ORTHO05D005862 3.7e-19 100.1 313 28.1
CsaV3_1G029530 Cucumis sativus L. HOM05D005241 ORTHO05D005862 8.3e-19 99.0 319 27.0
THA.LOC104813533 Tarenaya hassleriana HOM05D005241 ORTHO05D005862 1.1e-18 98.6 313 28.4
Aqoxy4G03021 Aquilegia oxysepala HOM05D005241 ORTHO05D005862 7.1e-18 95.9 318 27.4
Pp3c3_37310 Physcomitrium patens HOM05D005241 ORTHO05D005862 7.1e-18 95.9 321 26.8
AUR62039979 Chenopodium quinoa HOM05D005241 ORTHO05D005862 9.2e-18 95.5 299 27.8
Sc08g0005390 Simmondsia chinensis HOM05D005241 ORTHO05D005862 4.6e-17 93.2 315 27.6
Hma1.2p1_0921F.1_g236680 Hydrangea macrophylla HOM05D005241 ORTHO05D005862 1.7e-16 91.3 345 26.4
Hma1.2p1_2604F.1_g325280 Hydrangea macrophylla HOM05D005241 ORTHO05D005862 3.0e-16 90.5 388 25.5
SEGI_04095 Sequoiadendron giganteum HOM05D005241 ORTHO05D005862 3.6e-14 83.6 212 31.1
Migut.J01437 Erythranthe guttata HOM05D005241 ORTHO05D005862 3.1e-13 80.5 216 30.6
Sed0027242 Sechium edule HOM05D005241 ORTHO05D005862 2.6e-12 77.4 233 30.9
HPP92_026039 Vanilla planifolia HOM05D005241 ORTHO05D005862 2.6e-12 77.4 275 25.8
EL10Ac9g22414 Beta vulgaris HOM05D005241 ORTHO05D005862 4.9e-11 73.2 308 24.7
Prupe.1G095300 Prunus persica HOM05D005241 ORTHO05D005862 1.1e-10 72.0 181 32.6
FAN22G1361 Fragaria x ananassa HOM05D005241 ORTHO05D005862 2.1e-09 67.8 204 27.5
TPR.G5299 Trifolium pratense HOM05D005241 ORTHO05D005862 2.7e-09 67.4 185 26.5
MELO3C029512.2 Cucumis melo HOM05D005241 ORTHO05D005862 2.3e-08 64.3 243 23.9
MBI18_g46216_MAGBIO Magnolia biondii HOM05D005241 ORTHO05D005862 5.6e-07 59.7 75 33.3
EL10Ac7g17876 Beta vulgaris HOM05D005241 ORTHO05D005862 7.3e-07 59.3 75 34.7
Peaxi162Scf00014g00192 Petunia axillaris HOM05D005241 ORTHO05D005862 3.6e-06 57.0 60 33.3
Sc08g0005370 Simmondsia chinensis HOM05D005241 ORTHO05D005862 8.1e-06 55.8 81 32.1


User provided reference genes

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