Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI02797 Sapria himalayana HOM05D006447 ORTHO05D007938 9.3e-119 430.3 222 100.0
Manes.03G029700 Manihot esculenta HOM05D006447 ORTHO05D007938 1.6e-70 270.0 173 80.9
Aqoxy7G01349 Aquilegia oxysepala HOM05D006447 ORTHO05D007938 3.0e-69 265.8 173 77.5
Nitab4.5_0000540g0030 Nicotiana tabacum HOM05D006447 ORTHO05D007938 4.0e-69 265.4 173 79.2
Cpa.g.sc229.2 Carica papaya HOM05D006447 ORTHO05D007938 5.2e-69 265.0 173 76.9
Peaxi162Scf00498g00029 Petunia axillaris HOM05D006447 ORTHO05D007938 6.8e-69 264.6 172 77.9
TAR626G0126 Trochodendron aralioides HOM05D006447 ORTHO05D007938 6.8e-69 264.6 173 78.6
Lj7A670G54 Lonicera japonica HOM05D006447 ORTHO05D007938 8.8e-69 264.2 169 81.1
Gorai.001G010200 Gossypium raimondii HOM05D006447 ORTHO05D007938 1.5e-68 263.5 173 78.0
Potri.018G069800 Populus trichocarpa HOM05D006447 ORTHO05D007938 1.5e-68 263.5 173 79.2
TAR626G0261 Trochodendron aralioides HOM05D006447 ORTHO05D007938 1.5e-68 263.5 173 78.0
TAR728G0001 Trochodendron aralioides HOM05D006447 ORTHO05D007938 2.0e-68 263.1 173 78.0
CSS0014749 Camellia sinensis var. sinensis HOM05D006447 ORTHO05D007938 3.4e-68 262.3 172 79.1
Gohir.D07G009900 Gossypium hirsutum HOM05D006447 ORTHO05D007938 7.5e-68 261.2 169 79.3
PGR142G0783 Punica granatum HOM05D006447 ORTHO05D007938 7.5e-68 261.2 173 77.5
AUR62030454 Chenopodium quinoa HOM05D006447 ORTHO05D007938 9.8e-68 260.8 173 75.7
MBI01_g35891_MAGBIO Magnolia biondii HOM05D006447 ORTHO05D007938 9.8e-68 260.8 172 77.9
Gohir.A07G009600 Gossypium hirsutum HOM05D006447 ORTHO05D007938 1.3e-67 260.4 173 76.9
Ciclev10009402m.g Citrus clementina HOM05D006447 ORTHO05D007938 1.7e-67 260.0 173 76.9
Actinidia39754 Actinidia chinensis HOM05D006447 ORTHO05D007938 2.2e-67 259.6 173 76.9
CAN.G1241.6 Capsicum annuum HOM05D006447 ORTHO05D007938 2.8e-67 259.2 172 77.3
Sabra18G0061100 Salix brachista HOM05D006447 ORTHO05D007938 4.8e-67 258.5 174 77.0
THA.LOC104814578 Tarenaya hassleriana HOM05D006447 ORTHO05D007938 4.8e-67 258.5 173 76.3
Nn8g38980 Nelumbo nucifera HOM05D006447 ORTHO05D007938 6.3e-67 258.1 179 72.6
Prupe.7G215800 Prunus persica HOM05D006447 ORTHO05D007938 6.3e-67 258.1 173 76.9
EL10Ac5g12560 Beta vulgaris HOM05D006447 ORTHO05D007938 1.4e-66 256.9 173 75.1
Migut.K00568 Erythranthe guttata HOM05D006447 ORTHO05D007938 1.4e-66 256.9 173 75.1
Ca_16628_v3 Cicer arietinum L. HOM05D006447 ORTHO05D007938 1.8e-66 256.5 173 75.1
ClCG03G015910 Citrullus lanatus HOM05D006447 ORTHO05D007938 2.4e-66 256.1 172 75.6
Hund14295 Selenicereus undatus HOM05D006447 ORTHO05D007938 2.4e-66 256.1 183 73.2
RcHm_v2.0_Chr2g0092441 Rosa chinensis HOM05D006447 ORTHO05D007938 3.1e-66 255.8 173 76.3
Lalb_Chr22g0349841 Lupinus albus HOM05D006447 ORTHO05D007938 4.1e-66 255.4 173 74.6
SGA_v2.0_scaffold210G42077 Striga asiatica HOM05D006447 ORTHO05D007938 5.4e-66 255.0 173 74.6
Sed0005705 Sechium edule HOM05D006447 ORTHO05D007938 7.0e-66 254.6 173 75.1
DCAR_031970 Daucus carota HOM05D006447 ORTHO05D007938 9.1e-66 254.2 173 75.1
Lsat_1_v5_gn_5_146261 Lactuca sativa HOM05D006447 ORTHO05D007938 9.1e-66 254.2 172 74.4
MD15G1201700 Malus domestica HOM05D006447 ORTHO05D007938 9.1e-66 254.2 173 75.1
Sopen12g003620 Solanum pennellii HOM05D006447 ORTHO05D007938 9.1e-66 254.2 173 75.7
Os09g0280600 Oryza sativa ssp. japonica HOM05D006447 ORTHO05D007938 1.2e-65 253.8 173 75.1
Sc18g0001690 Simmondsia chinensis HOM05D006447 ORTHO05D007938 1.2e-65 253.8 173 72.8
Sc18g0001740 Simmondsia chinensis HOM05D006447 ORTHO05D007938 1.2e-65 253.8 173 72.8
DCAR_024680 Daucus carota HOM05D006447 ORTHO05D007938 1.6e-65 253.4 172 75.6
Eucgr.C00935 Eucalyptus grandis HOM05D006447 ORTHO05D007938 1.6e-65 253.4 173 74.0
BcaNung00456 Brassica carinata HOM05D006447 ORTHO05D007938 2.7e-65 252.7 179 72.1
BolC7t46152H Brassica oleracea HOM05D006447 ORTHO05D007938 2.7e-65 252.7 179 72.1
Cfa003143 Carpinus fangiana HOM05D006447 ORTHO05D007938 2.7e-65 252.7 173 75.7
ECA234G4260 Erigeron canadensis HOM05D006447 ORTHO05D007938 2.7e-65 252.7 176 73.3
BraA03t14939Z Brassica rapa HOM05D006447 ORTHO05D007938 3.5e-65 252.3 183 69.9
Thhalv10026148m.g Eutrema salsugineum HOM05D006447 ORTHO05D007938 3.5e-65 252.3 173 72.3
Glyma.01G004700 Glycine max HOM05D006447 ORTHO05D007938 4.5e-65 251.9 173 73.4
PSO063G5072 Papaver somniferum HOM05D006447 ORTHO05D007938 4.5e-65 251.9 173 73.4
Psat1g048880 Pisum sativum HOM05D006447 ORTHO05D007938 4.5e-65 251.9 174 73.6
Aa31LG2G21480 Aethionema arabicum HOM05D006447 ORTHO05D007938 5.9e-65 251.5 172 75.0
Medtr6g090585 Medicago truncatula HOM05D006447 ORTHO05D007938 5.9e-65 251.5 173 74.0
unitig_749.g13512 Utricularia gibba HOM05D006447 ORTHO05D007938 7.7e-65 251.1 177 71.2
FAN26G2507 Fragaria x ananassa HOM05D006447 ORTHO05D007938 1.0e-64 250.8 173 74.6
Nitab4.5_0003781g0070 Nicotiana tabacum HOM05D006447 ORTHO05D007938 1.0e-64 250.8 165 78.8
FvH4_1g06700 Fragaria vesca HOM05D006447 ORTHO05D007938 1.3e-64 250.4 173 75.1
PSO832G0153 Papaver somniferum HOM05D006447 ORTHO05D007938 1.3e-64 250.4 173 72.8
SalBow1G2756 Salvia bowleyana HOM05D006447 ORTHO05D007938 1.7e-64 250.0 173 74.0
SalBow1G3435 Salvia bowleyana HOM05D006447 ORTHO05D007938 1.7e-64 250.0 173 74.0
CsaV3_1G040040 Cucumis sativus L. HOM05D006447 ORTHO05D007938 2.2e-64 249.6 173 74.0
ATR0705G171 Amborella trichopoda HOM05D006447 ORTHO05D007938 2.9e-64 249.2 173 72.8
CARHR236900 Cardamine hirsuta HOM05D006447 ORTHO05D007938 5.0e-64 248.4 173 71.7
A03p58760 Brassica napus HOM05D006447 ORTHO05D007938 6.5e-64 248.1 172 73.3
AT4G29170 Arabidopsis thaliana HOM05D006447 ORTHO05D007938 8.5e-64 247.7 173 72.3
QL02p040054 Quercus lobata HOM05D006447 ORTHO05D007938 8.5e-64 247.7 173 72.3
HanXRQChr10g0319031 Helianthus annuus HOM05D006447 ORTHO05D007938 1.5e-63 246.9 173 72.3
arahy.Tifrunner.gnm1.ann1.2E9KT7 Arachis hypogaea HOM05D006447 ORTHO05D007938 2.5e-63 246.1 201 65.7
arahy.Tifrunner.gnm1.ann1.D97E3U Arachis hypogaea HOM05D006447 ORTHO05D007938 2.5e-63 246.1 201 65.7
TPR.G26948 Trifolium pratense HOM05D006447 ORTHO05D007938 2.5e-63 246.1 173 72.3
AL7G23270 Arabidopsis lyrata HOM05D006447 ORTHO05D007938 1.2e-62 243.8 173 71.7
Carub.0007s1142 Capsella rubella HOM05D006447 ORTHO05D007938 1.2e-62 243.8 173 71.1
Eucgr.C00941 Eucalyptus grandis HOM05D006447 ORTHO05D007938 2.1e-62 243.0 174 72.4
HPP92_025693 Vanilla planifolia HOM05D006447 ORTHO05D007938 1.0e-61 240.7 173 72.3
Phvul.004G173200 Phaseolus vulgaris HOM05D006447 ORTHO05D007938 1.4e-61 240.4 173 69.9
Cc06_g10870 Coffea canephora HOM05D006447 ORTHO05D007938 2.3e-61 239.6 158 76.6
VMungo0464G1544 Vigna mungo HOM05D006447 ORTHO05D007938 3.0e-61 239.2 173 69.9
GSVIVG01015263001 Vitis vinifera HOM05D006447 ORTHO05D007938 4.0e-61 238.8 158 76.6
C07p56700 Brassica napus HOM05D006447 ORTHO05D007938 5.2e-61 238.4 205 62.9
AUR62010457 Chenopodium quinoa HOM05D006447 ORTHO05D007938 6.8e-61 238.0 158 75.9
Lj2g0017011 Lotus japonicus HOM05D006447 ORTHO05D007938 8.8e-61 237.7 173 69.4
COL.COLO4_18262 Corchorus olitorius HOM05D006447 ORTHO05D007938 1.2e-60 237.3 154 79.9
PGSC0003DMG400000348 Solanum tuberosum HOM05D006447 ORTHO05D007938 2.6e-60 236.1 199 64.3
Oeu057342.1 Olea europaea HOM05D006447 ORTHO05D007938 9.8e-60 234.2 158 75.9
Ca_25608_v3 Cicer arietinum L. HOM05D006447 ORTHO05D007938 6.3e-59 231.5 158 74.1
Rhsim05G0029800 Rhododendron simsii HOM05D006447 ORTHO05D007938 8.3e-59 231.1 163 74.2
Pp3c5_5010 Physcomitrium patens HOM05D006447 ORTHO05D007938 5.4e-58 228.4 173 67.1
Mapoly0019s0059 Marchantia polymorpha HOM05D006447 ORTHO05D007938 3.5e-57 225.7 190 62.6
Zm00001eb094560 Zea mays HOM05D006447 ORTHO05D007938 1.0e-56 224.2 154 72.7
BcaNung00458 Brassica carinata HOM05D006447 ORTHO05D007938 1.3e-56 223.8 158 71.5
SMO133G0018 Selaginella moellendorffii HOM05D006447 ORTHO05D007938 1.3e-56 223.8 176 64.2
Thecc.09G095600 Theobroma cacao HOM05D006447 ORTHO05D007938 2.9e-56 222.6 173 70.5
Eucgr.L02391 Eucalyptus grandis HOM05D006447 ORTHO05D007938 8.6e-56 221.1 158 72.2
AagrBONN_evm.TU.Sc2ySwM_344.5016 Anthoceros agrestis HOM05D006447 ORTHO05D007938 1.9e-55 219.9 173 64.2
Haze_25859 Corylus avellana HOM05D006447 ORTHO05D007938 1.6e-54 216.9 173 69.4
TWI34G0617 Tripterygium wilfordii HOM05D006447 ORTHO05D007938 4.7e-54 215.3 173 67.1
Atru.BG.7.p Acer truncatum HOM05D006447 ORTHO05D007938 1.8e-53 213.4 136 81.6
FAN19G0010 Fragaria x ananassa HOM05D006447 ORTHO05D007938 3.0e-53 212.6 173 67.6
CiPaw.04G153800 Carya illinoinensis HOM05D006447 ORTHO05D007938 3.4e-52 209.1 139 77.0
CAN.G3484.1 Capsicum annuum HOM05D006447 ORTHO05D007938 2.2e-51 206.5 151 72.8
Dinv42281 Davidia involucrata HOM05D006447 ORTHO05D007938 3.1e-45 186.0 170 61.2
CDE05G0869 Ceratophyllum demersum HOM05D006447 ORTHO05D007938 8.3e-43 177.9 137 66.4
FAN26G1122 Fragaria x ananassa HOM05D006447 ORTHO05D007938 5.4e-42 175.3 173 59.0
Sp7g27093 Schrenkiella parvula HOM05D006447 ORTHO05D007938 1.6e-41 173.7 113 76.1
vmacro10828 Vaccinium macrocarpon HOM05D006447 ORTHO05D007938 4.6e-41 172.2 171 57.9
CAN.G1241.4 Capsicum annuum HOM05D006447 ORTHO05D007938 1.7e-40 170.2 118 73.7
Mapoly0063s0089 Marchantia polymorpha HOM05D006447 ORTHO05D007938 9.8e-36 154.5 132 62.9
Aqoxy2G00494 Aquilegia oxysepala HOM05D006447 ORTHO05D007938 3.7e-35 152.5 151 60.3
MELO3C015434.2 Cucumis melo HOM05D006447 ORTHO05D007938 8.3e-35 151.4 137 60.6
PGR142G2135 Punica granatum HOM05D006447 ORTHO05D007938 1.2e-33 147.5 106 70.8
CAN.G4329.1 Capsicum annuum HOM05D006447 ORTHO05D007938 6.0e-33 145.2 106 70.8
MCO03G125 Micromonas commoda HOM05D006447 ORTHO05D007938 3.5e-25 119.4 169 37.3
Cre06.g278850 Chlamydomonas reinhardtii HOM05D006447 ORTHO05D007938 6.6e-24 115.2 165 40.0
PRCOL_00003806 Prasinoderma coloniale HOM05D006447 ORTHO05D007938 6.6e-24 115.2 177 41.8
BolC8t47800H Brassica oleracea HOM05D006447 ORTHO05D007938 1.5e-20 104.0 101 58.4
HanXRQChr11g0335721 Helianthus annuus HOM05D006447 ORTHO05D007938 1.5e-20 104.0 78 71.8
C08p09440 Brassica napus HOM05D006447 ORTHO05D007938 2.6e-20 103.2 101 58.4
Lsat_1_v5_gn_1_67520 Lactuca sativa HOM05D006447 ORTHO05D007938 3.8e-19 99.4 85 61.2
Sp7g27097 Schrenkiella parvula HOM05D006447 ORTHO05D007938 6.0e-09 65.5 51 58.8


User provided reference genes

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